RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 BCAR3O75815 825 aa16.01■□□□□ 0.15
NR1D1-201ENST00000246672 CCDC146Q8IYE0 955 aa16■□□□□ 0.15
NR1D1-201ENST00000246672 SPINK5Q9NQ38 1064 aaPredicted RBP16■□□□□ 0.15
NR1D1-201ENST00000246672 EIF3AQ14152 1382 aaKnown RBP15.99■□□□□ 0.15
NR1D1-201ENST00000246672 PLEKHD1A6NEE1 506 aa15.98■□□□□ 0.15
NR1D1-201ENST00000246672 KNSTRNQ9Y448 316 aa15.98■□□□□ 0.15
NR1D1-201ENST00000246672 MAGI2Q86UL8 1455 aa15.98■□□□□ 0.15
NR1D1-201ENST00000246672 PLA2R1Q13018 1463 aa15.97■□□□□ 0.15
NR1D1-201ENST00000246672 ABCC10Q5T3U5 1492 aa15.97■□□□□ 0.15
NR1D1-201ENST00000246672 LAMC1P11047 1609 aa15.97■□□□□ 0.15
NR1D1-201ENST00000246672 TRMT2AQ8IZ69 625 aaKnown RBP15.97■□□□□ 0.15
NR1D1-201ENST00000246672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.15
NR1D1-201ENST00000246672 TBC1D2Q9BYX2 928 aa15.97■□□□□ 0.15
NR1D1-201ENST00000246672 VIRMAQ69YN4 1812 aaKnown RBP15.96■□□□□ 0.15
NR1D1-201ENST00000246672 GRIN2AQ12879 1464 aa15.96■□□□□ 0.15
NR1D1-201ENST00000246672 NLRP1Q9C000 1473 aa15.96■□□□□ 0.15
NR1D1-201ENST00000246672 MCM4P33991 863 aa15.95■□□□□ 0.14
NR1D1-201ENST00000246672 AMER1Q5JTC6 1135 aaPredicted RBP15.95■□□□□ 0.14
NR1D1-201ENST00000246672 SPRYD3Q8NCJ5 442 aa15.95■□□□□ 0.14
NR1D1-201ENST00000246672 WDR7Q9Y4E6 1490 aa15.95■□□□□ 0.14
NR1D1-201ENST00000246672 APAF1O14727 1248 aa15.94■□□□□ 0.14
NR1D1-201ENST00000246672 NKTRP30414 1462 aaKnown RBP15.94■□□□□ 0.14
NR1D1-201ENST00000246672 MAPK8IP3Q9UPT6 1336 aa15.93■□□□□ 0.14
NR1D1-201ENST00000246672 MYO5CQ9NQX4 1742 aa15.93■□□□□ 0.14
NR1D1-201ENST00000246672 CLASP1Q7Z460 1538 aa15.93■□□□□ 0.14
NR1D1-201ENST00000246672 MAGI1Q96QZ7 1491 aaPredicted RBP15.93■□□□□ 0.14
NR1D1-201ENST00000246672 DMRT2Q9Y5R5 561 aa15.92■□□□□ 0.14
NR1D1-201ENST00000246672 TBC1D32Q96NH3 1257 aa15.92■□□□□ 0.14
NR1D1-201ENST00000246672 ERBB4Q15303 1308 aa15.91■□□□□ 0.14
NR1D1-201ENST00000246672 TRAK2O60296 914 aa15.91■□□□□ 0.14
NR1D1-201ENST00000246672 MRE11P49959 708 aa15.91■□□□□ 0.14
NR1D1-201ENST00000246672 ESPNB1AK53 854 aa15.91■□□□□ 0.14
NR1D1-201ENST00000246672 PANK1Q8TE04 598 aa15.91■□□□□ 0.14
NR1D1-201ENST00000246672 COG6Q9Y2V7 657 aa15.91■□□□□ 0.14
NR1D1-201ENST00000246672 EIF2AK4Q9P2K8 1649 aaKnown RBP15.9■□□□□ 0.14
NR1D1-201ENST00000246672 CLUAP1Q96AJ1 413 aa15.9■□□□□ 0.14
NR1D1-201ENST00000246672 MYH16Q9H6N6 1097 aa15.9■□□□□ 0.14
NR1D1-201ENST00000246672 UPF2Q9HAU5 1272 aaKnown RBP15.9■□□□□ 0.14
NR1D1-201ENST00000246672 ARHGEF5Q12774 1597 aa15.9■□□□□ 0.14
NR1D1-201ENST00000246672 CCDC141Q6ZP82 1450 aa15.89■□□□□ 0.13
NR1D1-201ENST00000246672 CGNL1Q0VF96 1302 aa15.89■□□□□ 0.13
NR1D1-201ENST00000246672 E9PSI1 815 aa15.88■□□□□ 0.13
NR1D1-201ENST00000246672 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
NR1D1-201ENST00000246672 ATP10BO94823 1461 aa15.88■□□□□ 0.13
NR1D1-201ENST00000246672 MRC2Q9UBG0 1479 aa15.88■□□□□ 0.13
NR1D1-201ENST00000246672 CANXP27824 592 aaKnown RBP15.88■□□□□ 0.13
NR1D1-201ENST00000246672 GRPEL1Q9HAV7 217 aa15.87■□□□□ 0.13
NR1D1-201ENST00000246672 PIK3C2GO75747 1445 aa15.87■□□□□ 0.13
NR1D1-201ENST00000246672 PDE3AQ14432 1141 aa15.87■□□□□ 0.13
NR1D1-201ENST00000246672 NUP160Q12769 1436 aa15.87■□□□□ 0.13
NR1D1-201ENST00000246672 IFT140Q96RY7 1462 aa15.87■□□□□ 0.13
NR1D1-201ENST00000246672 ABCA8O94911 1581 aa15.86■□□□□ 0.13
NR1D1-201ENST00000246672 ASXL1Q8IXJ9 1541 aa15.86■□□□□ 0.13
NR1D1-201ENST00000246672 CARMIL2Q6F5E8 1435 aa15.86■□□□□ 0.13
NR1D1-201ENST00000246672 CENPJQ9HC77 1338 aaPredicted RBP15.85■□□□□ 0.13
NR1D1-201ENST00000246672 JPH4Q96JJ6 628 aa15.85■□□□□ 0.13
NR1D1-201ENST00000246672 FBLN2P98095 1184 aa15.85■□□□□ 0.13
NR1D1-201ENST00000246672 CHMP7Q8WUX9 453 aaPredicted RBP15.85■□□□□ 0.13
NR1D1-201ENST00000246672 SAMD9LQ8IVG5 1584 aa15.84■□□□□ 0.13
NR1D1-201ENST00000246672 CHMP5Q9NZZ3 219 aa15.84■□□□□ 0.13
NR1D1-201ENST00000246672 ABCC2Q92887 1545 aa15.84■□□□□ 0.13
NR1D1-201ENST00000246672 RNF17Q9BXT8 1623 aaKnown RBP15.84■□□□□ 0.13
NR1D1-201ENST00000246672 UNC13BO14795 1591 aa15.83■□□□□ 0.12
NR1D1-201ENST00000246672 SYNMO15061 1565 aa15.82■□□□□ 0.12
NR1D1-201ENST00000246672 TRIM44Q96DX7 344 aaPredicted RBP15.81■□□□□ 0.12
NR1D1-201ENST00000246672 PCDHB15Q9Y5E8 787 aa15.81■□□□□ 0.12
NR1D1-201ENST00000246672 CDCA8Q53HL2 280 aa15.81■□□□□ 0.12
NR1D1-201ENST00000246672 PDZRN3Q9UPQ7 1066 aa15.81■□□□□ 0.12
NR1D1-201ENST00000246672 PDCL3Q9H2J4 239 aa15.81■□□□□ 0.12
NR1D1-201ENST00000246672 TNNQ9UQP3 1299 aa15.81■□□□□ 0.12
NR1D1-201ENST00000246672 TPM2P07951 284 aa15.8■□□□□ 0.12
NR1D1-201ENST00000246672 CDC42BPBQ9Y5S2 1711 aa15.79■□□□□ 0.12
NR1D1-201ENST00000246672 NINLQ9Y2I6 1382 aa15.79■□□□□ 0.12
NR1D1-201ENST00000246672 RSPH4AQ5TD94 716 aa15.79■□□□□ 0.12
NR1D1-201ENST00000246672 GAS2L3Q86XJ1 694 aa15.79■□□□□ 0.12
NR1D1-201ENST00000246672 WWC1Q8IX03 1113 aa15.79■□□□□ 0.12
NR1D1-201ENST00000246672 PMFBP1Q8TBY8 1022 aa15.79■□□□□ 0.12
NR1D1-201ENST00000246672 IQGAP1P46940 1657 aa15.79■□□□□ 0.12
NR1D1-201ENST00000246672 IQGAP3Q86VI3 1631 aa15.79■□□□□ 0.12
NR1D1-201ENST00000246672 RLBP1P12271 317 aa15.78■□□□□ 0.12
NR1D1-201ENST00000246672 SYCP2Q9BX26 1530 aa15.78■□□□□ 0.12
NR1D1-201ENST00000246672 NPC1L1Q9UHC9 1359 aa15.78■□□□□ 0.12
NR1D1-201ENST00000246672 DDX11L8A8MPP1 907 aa15.77■□□□□ 0.12
NR1D1-201ENST00000246672 NEUROD2Q15784 382 aa15.77■□□□□ 0.12
NR1D1-201ENST00000246672 MYOM1P52179 1685 aa15.77■□□□□ 0.12
NR1D1-201ENST00000246672 ISY1Q9ULR0 285 aaKnown RBP15.77■□□□□ 0.11
NR1D1-201ENST00000246672 C22orf23Q9BZE7 217 aa15.76■□□□□ 0.11
NR1D1-201ENST00000246672 RARSP54136 660 aaKnown RBP15.76■□□□□ 0.11
NR1D1-201ENST00000246672 KIAA1211Q6ZU35 1233 aa15.76■□□□□ 0.11
NR1D1-201ENST00000246672 ZNF692Q9BU19 519 aaPredicted RBP15.76■□□□□ 0.11
NR1D1-201ENST00000246672 BCL2L13Q9BXK5 485 aa15.76■□□□□ 0.11
NR1D1-201ENST00000246672 ATP10AO60312 1499 aa15.76■□□□□ 0.11
NR1D1-201ENST00000246672 MADDQ8WXG6 1647 aa15.76■□□□□ 0.11
NR1D1-201ENST00000246672 MFAP1P55081 439 aaKnown RBP15.75■□□□□ 0.11
NR1D1-201ENST00000246672 PLXNC1O60486 1568 aa15.75■□□□□ 0.11
NR1D1-201ENST00000246672 SCAF11Q99590 1463 aaKnown RBP15.75■□□□□ 0.11
NR1D1-201ENST00000246672 RRP7AQ9Y3A4 280 aaKnown RBP15.75■□□□□ 0.11
NR1D1-201ENST00000246672 PREX2Q70Z35 1606 aa15.75■□□□□ 0.11
NR1D1-201ENST00000246672 RTEL1-TNFRSF6BF6WH68 1400 aa15.74■□□□□ 0.11
NR1D1-201ENST00000246672 NGEFQ8N5V2 710 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms