RNA–Protein interactions for RNA: ENST00000245923.8

RTN2-201, Transcript of reticulon 2, humanhuman

TSL 1 (best) BASIC

Gene RTN2, Length 2,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-201ENST00000245923 CDCA8Q53HL2 280 aa35.29■■■■□ 3.24
RTN2-201ENST00000245923 UGGT1Q9NYU2 1555 aa35.28■■■■□ 3.24
RTN2-201ENST00000245923 NPM1P06748 294 aaKnown RBP eCLIP35.28■■■■□ 3.24
RTN2-201ENST00000245923 OSCARQ8IYS5 282 aa35.27■■■■□ 3.24
RTN2-201ENST00000245923 EIF3AQ14152 1382 aaKnown RBP35.27■■■■□ 3.24
RTN2-201ENST00000245923 BLMP54132 1417 aaPredicted RBP35.26■■■■□ 3.23
RTN2-201ENST00000245923 ABCA6Q8N139 1617 aa35.25■■■■□ 3.23
RTN2-201ENST00000245923 PDE3BQ13370 1112 aa35.25■■■■□ 3.23
RTN2-201ENST00000245923 MYOM1P52179 1685 aa35.24■■■■□ 3.23
RTN2-201ENST00000245923 POGZQ7Z3K3 1410 aa35.23■■■■□ 3.23
RTN2-201ENST00000245923 CD109Q6YHK3 1445 aa35.22■■■■□ 3.23
RTN2-201ENST00000245923 MROH2AA6NES4 1674 aa35.22■■■■□ 3.23
RTN2-201ENST00000245923 MLH3Q9UHC1 1453 aa35.21■■■■□ 3.23
RTN2-201ENST00000245923 KDM5AP29375 1690 aaKnown RBP35.19■■■■□ 3.22
RTN2-201ENST00000245923 NRXN1Q9ULB1 1477 aa35.18■■■■□ 3.22
RTN2-201ENST00000245923 FRMPD1Q5SYB0 1578 aa35.17■■■■□ 3.22
RTN2-201ENST00000245923 KNSTRNQ9Y448 316 aa35.17■■■■□ 3.22
RTN2-201ENST00000245923 HECW2Q9P2P5 1572 aa35.17■■■■□ 3.22
RTN2-201ENST00000245923 AMER1Q5JTC6 1135 aaPredicted RBP35.15■■■■□ 3.22
RTN2-201ENST00000245923 ADGRB3O60242 1522 aa35.15■■■■□ 3.22
RTN2-201ENST00000245923 ASXL1Q8IXJ9 1541 aa35.14■■■■□ 3.22
RTN2-201ENST00000245923 SLC24A1O60721 1099 aa35.14■■■■□ 3.22
RTN2-201ENST00000245923 ADGRF5Q8IZF2 1346 aa35.13■■■■□ 3.22
RTN2-201ENST00000245923 CFAP70Q5T0N1 1121 aa35.12■■■■□ 3.21
RTN2-201ENST00000245923 FANCIQ9NVI1 1328 aa35.12■■■■□ 3.21
RTN2-201ENST00000245923 ANP32EQ9BTT0 268 aa35.12■■■■□ 3.21
RTN2-201ENST00000245923 NPC1L1Q9UHC9 1359 aa35.11■■■■□ 3.21
RTN2-201ENST00000245923 MYO3AQ8NEV4 1616 aa35.1■■■■□ 3.21
RTN2-201ENST00000245923 RRP1P56182 461 aaKnown RBP35.08■■■■□ 3.21
RTN2-201ENST00000245923 RCAN3Q9UKA8 241 aa35.08■■■■□ 3.21
RTN2-201ENST00000245923 PPP2R1AP30153 589 aa35.08■■■■□ 3.21
RTN2-201ENST00000245923 SALL2Q9Y467 1007 aaPredicted RBP35.08■■■■□ 3.21
RTN2-201ENST00000245923 CCDC136Q96JN2 1154 aa35.07■■■■□ 3.21
RTN2-201ENST00000245923 NPATQ14207 1427 aa35.07■■■■□ 3.2
RTN2-201ENST00000245923 ERVK-7P63135 1459 aa35.06■■■■□ 3.2
RTN2-201ENST00000245923 SETBP1Q9Y6X0 1596 aa35.06■■■■□ 3.2
RTN2-201ENST00000245923 PPLO60437 1756 aa35.04■■■■□ 3.2
RTN2-201ENST00000245923 PIK3C2GO75747 1445 aa35.03■■■■□ 3.2
RTN2-201ENST00000245923 NEO1Q92859 1461 aa35.03■■■■□ 3.2
RTN2-201ENST00000245923 SBNO2Q9Y2G9 1366 aa35.02■■■■□ 3.2
RTN2-201ENST00000245923 NOS1P29475 1434 aa35.01■■■■□ 3.2
RTN2-201ENST00000245923 ABCC3O15438 1527 aa35■■■■□ 3.19
RTN2-201ENST00000245923 CDCA7LQ96GN5 454 aa35■■■■□ 3.19
RTN2-201ENST00000245923 CFAP65Q6ZU64 1925 aaKnown RBP35■■■■□ 3.19
RTN2-201ENST00000245923 ADAMTS8Q9UP79 889 aa34.99■■■■□ 3.19
RTN2-201ENST00000245923 CAMSAP1Q5T5Y3 1602 aa34.95■■■■□ 3.19
RTN2-201ENST00000245923 GGT6Q6P531 493 aa34.95■■■■□ 3.19
RTN2-201ENST00000245923 WDR43Q15061 677 aaKnown RBP eCLIP34.92■■■■□ 3.18
RTN2-201ENST00000245923 MSH5O43196 834 aa34.91■■■■□ 3.18
RTN2-201ENST00000245923 ZC3H13Q5T200 1668 aaKnown RBP34.91■■■■□ 3.18
RTN2-201ENST00000245923 RPGRIP1LQ68CZ1 1315 aa34.9■■■■□ 3.18
RTN2-201ENST00000245923 DIP2CQ9Y2E4 1556 aa34.89■■■■□ 3.18
RTN2-201ENST00000245923 SIGLEC1Q9BZZ2 1709 aa34.89■■■■□ 3.18
RTN2-201ENST00000245923 ADGRB1O14514 1584 aa34.88■■■■□ 3.17
RTN2-201ENST00000245923 CHGAP10645 457 aaKnown RBP34.88■■■■□ 3.17
RTN2-201ENST00000245923 C14orf93Q9H972 538 aaKnown RBP34.88■■■■□ 3.17
RTN2-201ENST00000245923 PIK3C2BO00750 1634 aa34.88■■■■□ 3.17
RTN2-201ENST00000245923 CENPJQ9HC77 1338 aaPredicted RBP34.87■■■■□ 3.17
RTN2-201ENST00000245923 EXOC6Q8TAG9 804 aa34.86■■■■□ 3.17
RTN2-201ENST00000245923 RICTORQ6R327 1708 aa34.86■■■■□ 3.17
RTN2-201ENST00000245923 QRICH2Q9H0J4 1663 aa34.85■■■■□ 3.17
RTN2-201ENST00000245923 CARD14Q9BXL6 1004 aa34.83■■■■□ 3.17
RTN2-201ENST00000245923 RAPGEF3O95398 923 aa34.83■■■■□ 3.17
RTN2-201ENST00000245923 PLEKHH1Q9ULM0 1364 aa34.82■■■■□ 3.16
RTN2-201ENST00000245923 ZNF521Q96K83 1311 aa34.81■■■■□ 3.16
RTN2-201ENST00000245923 ARHGAP31Q2M1Z3 1444 aa34.79■■■■□ 3.16
RTN2-201ENST00000245923 TRAK1Q9UPV9 953 aa34.75■■■■□ 3.15
RTN2-201ENST00000245923 NEXMIFQ5QGS0 1516 aa34.74■■■■□ 3.15
RTN2-201ENST00000245923 DUSP27Q5VZP5 1158 aa34.72■■■■□ 3.15
RTN2-201ENST00000245923 GLI2P10070 1586 aa34.72■■■■□ 3.15
RTN2-201ENST00000245923 GOLGA2Q08379 1002 aa34.69■■■■□ 3.14
RTN2-201ENST00000245923 ARHGEF28Q8N1W1 1705 aaKnown RBP34.68■■■■□ 3.14
RTN2-201ENST00000245923 TMEM132EQ6IEE7 984 aa34.67■■■■□ 3.14
RTN2-201ENST00000245923 USP32Q8NFA0 1604 aa34.67■■■■□ 3.14
RTN2-201ENST00000245923 PLIN1O60240 522 aa34.67■■■■□ 3.14
RTN2-201ENST00000245923 VGFO15240 615 aaPredicted RBP34.66■■■■□ 3.14
RTN2-201ENST00000245923 POLR3AO14802 1390 aaPredicted RBP34.65■■■■□ 3.14
RTN2-201ENST00000245923 NSD3Q9BZ95 1437 aa34.65■■■■□ 3.14
RTN2-201ENST00000245923 YEATS2Q9ULM3 1422 aa34.64■■■■□ 3.14
RTN2-201ENST00000245923 PUS7Q96PZ0 661 aaKnown RBP34.63■■■■□ 3.13
RTN2-201ENST00000245923 SLFN5Q08AF3 891 aa34.62■■■■□ 3.13
RTN2-201ENST00000245923 ZFYVE9O95405 1425 aa34.62■■■■□ 3.13
RTN2-201ENST00000245923 TRMT2AQ8IZ69 625 aaKnown RBP34.61■■■■□ 3.13
RTN2-201ENST00000245923 CCDC146Q8IYE0 955 aa34.61■■■■□ 3.13
RTN2-201ENST00000245923 CRBNQ96SW2 442 aa34.61■■■■□ 3.13
RTN2-201ENST00000245923 NGEFQ8N5V2 710 aa34.6■■■■□ 3.13
RTN2-201ENST00000245923 SLC12A5Q9H2X9 1139 aa34.59■■■■□ 3.13
RTN2-201ENST00000245923 PREX1Q8TCU6 1659 aa34.59■■■■□ 3.13
RTN2-201ENST00000245923 SLC52A1Q9NWF4 448 aa34.58■■■■□ 3.13
RTN2-201ENST00000245923 APAF1O14727 1248 aa34.57■■■■□ 3.13
RTN2-201ENST00000245923 IDI1Q13907 227 aa34.57■■■■□ 3.13
RTN2-201ENST00000245923 TCERG1O14776 1098 aaKnown RBP34.57■■■■□ 3.12
RTN2-201ENST00000245923 TULP4Q9NRJ4 1543 aa34.57■■■■□ 3.12
RTN2-201ENST00000245923 SHPRHQ149N8 1683 aa34.56■■■■□ 3.12
RTN2-201ENST00000245923 MYO5BQ9ULV0 1848 aa34.56■■■■□ 3.12
RTN2-201ENST00000245923 TMEM131LA2VDJ0 1609 aa34.54■■■■□ 3.12
RTN2-201ENST00000245923 EVC2Q86UK5 1308 aa34.53■■■■□ 3.12
RTN2-201ENST00000245923 ERICH6Q7L0X2 663 aa34.53■■■■□ 3.12
RTN2-201ENST00000245923 MORC1Q86VD1 984 aa34.53■■■■□ 3.12
RTN2-201ENST00000245923 NUTM2DQ5VT03 806 aaPredicted RBP34.52■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms