RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 WDR97A6NE52 1622 aa24.45■■□□□ 1.5
SOX4-201ENST00000244745 COG3Q96JB2 828 aa24.44■■□□□ 1.5
SOX4-201ENST00000244745 DIAPH1O60610 1272 aaKnown RBP24.43■■□□□ 1.5
SOX4-201ENST00000244745 HDAC5Q9UQL6 1122 aa24.43■■□□□ 1.5
SOX4-201ENST00000244745 ANKRD50Q9ULJ7 1429 aa24.43■■□□□ 1.5
SOX4-201ENST00000244745 VGFO15240 615 aaPredicted RBP24.42■■□□□ 1.5
SOX4-201ENST00000244745 CFTRP13569 1480 aa24.41■■□□□ 1.5
SOX4-201ENST00000244745 NGEFQ8N5V2 710 aa24.41■■□□□ 1.5
SOX4-201ENST00000244745 C22orf23Q9BZE7 217 aa24.4■■□□□ 1.5
SOX4-201ENST00000244745 ISY1Q9ULR0 285 aaKnown RBP24.4■■□□□ 1.5
SOX4-201ENST00000244745 FAM43AQ8N2R8 423 aa24.4■■□□□ 1.5
SOX4-201ENST00000244745 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.39■■□□□ 1.5
SOX4-201ENST00000244745 TAF7LQ5H9L4 462 aa24.39■■□□□ 1.49
SOX4-201ENST00000244745 ZNF771Q7L3S4 317 aaPredicted RBP24.38■■□□□ 1.49
SOX4-201ENST00000244745 LNPKQ9C0E8 428 aa24.38■■□□□ 1.49
SOX4-201ENST00000244745 CCDC9Q9Y3X0 531 aaKnown RBP24.36■■□□□ 1.49
SOX4-201ENST00000244745 H3BQV1 296 aa24.36■■□□□ 1.49
SOX4-201ENST00000244745 IFFO2Q5TF58 517 aa24.36■■□□□ 1.49
SOX4-201ENST00000244745 TIAM1Q13009 1591 aa24.36■■□□□ 1.49
SOX4-201ENST00000244745 REC8O95072 547 aa24.35■■□□□ 1.49
SOX4-201ENST00000244745 NBPF8Q3BBV2 869 aa24.35■■□□□ 1.49
SOX4-201ENST00000244745 CCDC184Q52MB2 194 aa24.35■■□□□ 1.49
SOX4-201ENST00000244745 EID1Q9Y6B2 187 aa24.35■■□□□ 1.49
SOX4-201ENST00000244745 GOLGA6L1Q8N7Z2 621 aa24.34■■□□□ 1.49
SOX4-201ENST00000244745 TRHP20396 242 aaPredicted RBP24.34■■□□□ 1.49
SOX4-201ENST00000244745 MCTP1Q6DN14 999 aa24.33■■□□□ 1.49
SOX4-201ENST00000244745 NECTIN2Q92692 538 aa24.33■■□□□ 1.49
SOX4-201ENST00000244745 API5Q9BZZ5 524 aaKnown RBP24.33■■□□□ 1.49
SOX4-201ENST00000244745 ATP6V1DQ9Y5K8 247 aa24.32■■□□□ 1.48
SOX4-201ENST00000244745 PPP2R1AP30153 589 aa24.32■■□□□ 1.48
SOX4-201ENST00000244745 SF3A1Q15459 793 aaKnown RBP24.32■■□□□ 1.48
SOX4-201ENST00000244745 DIAPH3Q9NSV4 1193 aa24.31■■□□□ 1.48
SOX4-201ENST00000244745 EHBP1L1Q8N3D4 1523 aa24.31■■□□□ 1.48
SOX4-201ENST00000244745 TOP2BQ02880 1626 aa24.3■■□□□ 1.48
SOX4-201ENST00000244745 SMG6Q86US8 1419 aaKnown RBP24.3■■□□□ 1.48
SOX4-201ENST00000244745 CLSTN1O94985 981 aa24.3■■□□□ 1.48
SOX4-201ENST00000244745 CREBRFQ8IUR6 639 aa24.3■■□□□ 1.48
SOX4-201ENST00000244745 FAM184AQ8NB25 1140 aa24.3■■□□□ 1.48
SOX4-201ENST00000244745 PKNOX2Q96KN3 472 aa24.29■■□□□ 1.48
SOX4-201ENST00000244745 AQRO60306 1485 aaKnown RBP eCLIP24.29■■□□□ 1.48
SOX4-201ENST00000244745 INTS3Q68E01 1043 aaKnown RBP24.29■■□□□ 1.48
SOX4-201ENST00000244745 ROCK1Q13464 1354 aa24.29■■□□□ 1.48
SOX4-201ENST00000244745 HMOX1P09601 288 aa24.28■■□□□ 1.48
SOX4-201ENST00000244745 PRKCSHP14314 528 aaPredicted RBP24.28■■□□□ 1.48
SOX4-201ENST00000244745 MRE11P49959 708 aa24.28■■□□□ 1.48
SOX4-201ENST00000244745 PRXQ9BXM0 1461 aa24.28■■□□□ 1.48
SOX4-201ENST00000244745 ANO2Q9NQ90 1003 aa24.28■■□□□ 1.48
SOX4-201ENST00000244745 KIF3AQ9Y496 699 aa24.28■■□□□ 1.48
SOX4-201ENST00000244745 EIF2S2P20042 333 aaKnown RBP24.27■■□□□ 1.48
SOX4-201ENST00000244745 GOLGA6L19H0YKK7 550 aa24.27■■□□□ 1.48
SOX4-201ENST00000244745 FRAT2O75474 233 aaPredicted RBP24.27■■□□□ 1.48
SOX4-201ENST00000244745 EFCAB5A4FU69 1503 aa24.26■■□□□ 1.47
SOX4-201ENST00000244745 HFM1A2PYH4 1435 aa24.26■■□□□ 1.47
SOX4-201ENST00000244745 AAMPQ13685 434 aa24.26■■□□□ 1.47
SOX4-201ENST00000244745 GGNBP2Q9H3C7 697 aa24.26■■□□□ 1.47
SOX4-201ENST00000244745 NBPF1Q3BBV0 1214 aa24.25■■□□□ 1.47
SOX4-201ENST00000244745 CABP2Q9NPB3 220 aa24.25■■□□□ 1.47
SOX4-201ENST00000244745 CCDC34Q96HJ3 373 aa24.25■■□□□ 1.47
SOX4-201ENST00000244745 TOMM22Q9NS69 142 aa24.25■■□□□ 1.47
SOX4-201ENST00000244745 R3HCC1Q9Y3T6 440 aaKnown RBP24.25■■□□□ 1.47
SOX4-201ENST00000244745 PDZRN3Q9UPQ7 1066 aa24.24■■□□□ 1.47
SOX4-201ENST00000244745 PNISRQ8TF01 805 aaKnown RBP24.23■■□□□ 1.47
SOX4-201ENST00000244745 ZNF592Q92610 1267 aa24.23■■□□□ 1.47
SOX4-201ENST00000244745 NUCB2P80303 420 aa24.23■■□□□ 1.47
SOX4-201ENST00000244745 MSH5O43196 834 aa24.23■■□□□ 1.47
SOX4-201ENST00000244745 BACH2Q9BYV9 841 aa24.23■■□□□ 1.47
SOX4-201ENST00000244745 GNAI1P63096 354 aa24.23■■□□□ 1.47
SOX4-201ENST00000244745 BCAR3O75815 825 aa24.23■■□□□ 1.47
SOX4-201ENST00000244745 KIAA1107Q9UPP5 1409 aa24.22■■□□□ 1.47
SOX4-201ENST00000244745 BECN2A8MW95 431 aa24.22■■□□□ 1.47
SOX4-201ENST00000244745 C1orf141Q5JVX7 400 aa24.22■■□□□ 1.47
SOX4-201ENST00000244745 TCP11L2Q8N4U5 519 aa24.22■■□□□ 1.47
SOX4-201ENST00000244745 RASSF8Q8NHQ8 419 aa24.22■■□□□ 1.47
SOX4-201ENST00000244745 RUFY2Q8WXA3 655 aa24.22■■□□□ 1.47
SOX4-201ENST00000244745 NCAPD3P42695 1498 aa24.21■■□□□ 1.47
SOX4-201ENST00000244745 CDC45O75419 566 aa24.21■■□□□ 1.47
SOX4-201ENST00000244745 MTHFSP49914 203 aa24.21■■□□□ 1.47
SOX4-201ENST00000244745 ARHGAP5Q13017 1502 aa24.21■■□□□ 1.47
SOX4-201ENST00000244745 TMEM132EQ6IEE7 984 aa24.2■■□□□ 1.46
SOX4-201ENST00000244745 NOC3LQ8WTT2 800 aaKnown RBP24.2■■□□□ 1.46
SOX4-201ENST00000244745 FKBP5Q13451 457 aaPredicted RBP24.2■■□□□ 1.46
SOX4-201ENST00000244745 TPM2P07951 284 aa24.19■■□□□ 1.46
SOX4-201ENST00000244745 C9orf78Q9NZ63 289 aaPredicted RBP24.19■■□□□ 1.46
SOX4-201ENST00000244745 TRAK2O60296 914 aa24.19■■□□□ 1.46
SOX4-201ENST00000244745 NASPP49321 788 aaPredicted RBP24.19■■□□□ 1.46
SOX4-201ENST00000244745 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.19■■□□□ 1.46
SOX4-201ENST00000244745 IFIT2P09913 472 aaKnown RBP24.18■■□□□ 1.46
SOX4-201ENST00000244745 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.18■■□□□ 1.46
SOX4-201ENST00000244745 ZKSCAN1P17029 563 aaPredicted RBP24.18■■□□□ 1.46
SOX4-201ENST00000244745 SUPT6HQ7KZ85 1726 aaKnown RBP24.18■■□□□ 1.46
SOX4-201ENST00000244745 TEFQ10587 303 aa24.18■■□□□ 1.46
SOX4-201ENST00000244745 STAC3Q96MF2 364 aa24.17■■□□□ 1.46
SOX4-201ENST00000244745 TSPYL4Q9UJ04 414 aa24.16■■□□□ 1.46
SOX4-201ENST00000244745 VPS37CA5D8V6 355 aaPredicted RBP24.15■■□□□ 1.46
SOX4-201ENST00000244745 CFAP70Q5T0N1 1121 aa24.15■■□□□ 1.46
SOX4-201ENST00000244745 SMC3Q9UQE7 1217 aa24.15■■□□□ 1.46
SOX4-201ENST00000244745 EXOSC9Q06265 439 aaKnown RBP24.14■■□□□ 1.46
SOX4-201ENST00000244745 HECW1Q76N89 1606 aa24.14■■□□□ 1.45
SOX4-201ENST00000244745 CCDC39Q9UFE4 941 aa24.13■■□□□ 1.45
SOX4-201ENST00000244745 BICD2Q8TD16 824 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms