RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 UHRF1BP1Q6BDS2 1440 aa16.49■□□□□ 0.23
TREM1-201ENST00000244709 RPGRIP1LQ68CZ1 1315 aa16.49■□□□□ 0.23
TREM1-201ENST00000244709 RIMS2Q9UQ26 1411 aa16.48■□□□□ 0.23
TREM1-201ENST00000244709 ZFYVE9O95405 1425 aa16.47■□□□□ 0.23
TREM1-201ENST00000244709 PRAG1Q86YV5 1406 aa16.47■□□□□ 0.23
TREM1-201ENST00000244709 NBPF8Q3BBV2 869 aa16.46■□□□□ 0.23
TREM1-201ENST00000244709 NUTM2DQ5VT03 806 aaPredicted RBP16.46■□□□□ 0.23
TREM1-201ENST00000244709 TMEM2Q9UHN6 1383 aa16.45■□□□□ 0.22
TREM1-201ENST00000244709 SLIT1O75093 1534 aa16.45■□□□□ 0.22
TREM1-201ENST00000244709 NRXN1Q9ULB1 1477 aa16.45■□□□□ 0.22
TREM1-201ENST00000244709 ADGRF5Q8IZF2 1346 aa16.44■□□□□ 0.22
TREM1-201ENST00000244709 ARHGAP23Q9P227 1491 aa16.44■□□□□ 0.22
TREM1-201ENST00000244709 TRPM1Q7Z4N2 1603 aa16.44■□□□□ 0.22
TREM1-201ENST00000244709 THEMISQ8N1K5 641 aaPredicted RBP16.43■□□□□ 0.22
TREM1-201ENST00000244709 STAC3Q96MF2 364 aa16.43■□□□□ 0.22
TREM1-201ENST00000244709 PIK3C2GO75747 1445 aa16.41■□□□□ 0.22
TREM1-201ENST00000244709 VGFO15240 615 aaPredicted RBP16.41■□□□□ 0.22
TREM1-201ENST00000244709 RALGAPBQ86X10 1494 aa16.4■□□□□ 0.22
TREM1-201ENST00000244709 KIAA1210Q9ULL0 1709 aa16.4■□□□□ 0.22
TREM1-201ENST00000244709 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.4■□□□□ 0.22
TREM1-201ENST00000244709 LMTK3Q96Q04 1460 aa16.39■□□□□ 0.21
TREM1-201ENST00000244709 LTKP29376 864 aa16.39■□□□□ 0.21
TREM1-201ENST00000244709 IQGAP1P46940 1657 aa16.39■□□□□ 0.21
TREM1-201ENST00000244709 NRXN3Q9Y4C0 1643 aa16.38■□□□□ 0.21
TREM1-201ENST00000244709 HDGFP51858 240 aaKnown RBP16.38■□□□□ 0.21
TREM1-201ENST00000244709 POLR1AO95602 1720 aaPredicted RBP16.38■□□□□ 0.21
TREM1-201ENST00000244709 TXNDC2Q86VQ3 553 aa16.37■□□□□ 0.21
TREM1-201ENST00000244709 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
TREM1-201ENST00000244709 SCAF11Q99590 1463 aaKnown RBP16.37■□□□□ 0.21
TREM1-201ENST00000244709 EID1Q9Y6B2 187 aa16.37■□□□□ 0.21
TREM1-201ENST00000244709 LAMC1P11047 1609 aa16.36■□□□□ 0.21
TREM1-201ENST00000244709 SETBP1Q9Y6X0 1596 aa16.36■□□□□ 0.21
TREM1-201ENST00000244709 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
TREM1-201ENST00000244709 CFAP70Q5T0N1 1121 aa16.35■□□□□ 0.21
TREM1-201ENST00000244709 ROCK2O75116 1388 aaKnown RBP16.35■□□□□ 0.21
TREM1-201ENST00000244709 PLEKHG1Q9ULL1 1385 aa16.35■□□□□ 0.21
TREM1-201ENST00000244709 NBPF1Q3BBV0 1214 aa16.34■□□□□ 0.21
TREM1-201ENST00000244709 ALKQ9UM73 1620 aa16.34■□□□□ 0.21
TREM1-201ENST00000244709 ANKLE2Q86XL3 938 aa16.33■□□□□ 0.2
TREM1-201ENST00000244709 C14orf93Q9H972 538 aaKnown RBP16.33■□□□□ 0.2
TREM1-201ENST00000244709 HSPA2P54652 639 aa16.32■□□□□ 0.2
TREM1-201ENST00000244709 GPRASP1Q5JY77 1395 aa16.32■□□□□ 0.2
TREM1-201ENST00000244709 ASXL1Q8IXJ9 1541 aa16.32■□□□□ 0.2
TREM1-201ENST00000244709 ADGRB1O14514 1584 aa16.31■□□□□ 0.2
TREM1-201ENST00000244709 ADAMTS13Q76LX8 1427 aa16.3■□□□□ 0.2
TREM1-201ENST00000244709 BCANQ96GW7 911 aa16.3■□□□□ 0.2
TREM1-201ENST00000244709 NCKAP5LQ9HCH0 1330 aa16.3■□□□□ 0.2
TREM1-201ENST00000244709 CARD11Q9BXL7 1154 aa16.3■□□□□ 0.2
TREM1-201ENST00000244709 STRCQ7RTU9 1775 aa16.29■□□□□ 0.2
TREM1-201ENST00000244709 DIP2AQ14689 1571 aa16.29■□□□□ 0.2
TREM1-201ENST00000244709 MED14O60244 1454 aa16.29■□□□□ 0.2
TREM1-201ENST00000244709 TMEM132EQ6IEE7 984 aa16.27■□□□□ 0.2
TREM1-201ENST00000244709 NPHP4O75161 1426 aaPredicted RBP16.27■□□□□ 0.2
TREM1-201ENST00000244709 SLC26A8Q96RN1 970 aa16.26■□□□□ 0.19
TREM1-201ENST00000244709 USP47Q96K76 1375 aa16.26■□□□□ 0.19
TREM1-201ENST00000244709 METP08581 1390 aa16.25■□□□□ 0.19
TREM1-201ENST00000244709 ARHGEF28Q8N1W1 1705 aaKnown RBP16.24■□□□□ 0.19
TREM1-201ENST00000244709 YTHDC2Q9H6S0 1430 aaKnown RBP16.23■□□□□ 0.19
TREM1-201ENST00000244709 HSPA5P11021 654 aaKnown RBP16.23■□□□□ 0.19
TREM1-201ENST00000244709 EIF4G2P78344 907 aaKnown RBP eCLIP16.23■□□□□ 0.19
TREM1-201ENST00000244709 KNDC1Q76NI1 1749 aa16.23■□□□□ 0.19
TREM1-201ENST00000244709 TBX22Q9Y458 520 aa16.22■□□□□ 0.19
TREM1-201ENST00000244709 HIRIP3Q9BW71 556 aaPredicted RBP16.21■□□□□ 0.19
TREM1-201ENST00000244709 CHD2O14647 1828 aaKnown RBP16.2■□□□□ 0.18
TREM1-201ENST00000244709 PTPRUQ92729 1446 aa16.2■□□□□ 0.18
TREM1-201ENST00000244709 LRPPRCP42704 1394 aaKnown RBP16.2■□□□□ 0.18
TREM1-201ENST00000244709 STK26Q9P289 416 aa16.2■□□□□ 0.18
TREM1-201ENST00000244709 TRAK1Q9UPV9 953 aa16.2■□□□□ 0.18
TREM1-201ENST00000244709 XRN1Q8IZH2 1706 aaKnown RBP16.19■□□□□ 0.18
TREM1-201ENST00000244709 EIF3AQ14152 1382 aaKnown RBP16.18■□□□□ 0.18
TREM1-201ENST00000244709 DLC1Q96QB1 1528 aa16.18■□□□□ 0.18
TREM1-201ENST00000244709 ST20-MTHFSA0A0A6YYL1 179 aa16.18■□□□□ 0.18
TREM1-201ENST00000244709 AEBP2Q6ZN18 517 aaPredicted RBP16.18■□□□□ 0.18
TREM1-201ENST00000244709 QRICH2Q9H0J4 1663 aa16.17■□□□□ 0.18
TREM1-201ENST00000244709 CPS1P31327 1500 aa16.17■□□□□ 0.18
TREM1-201ENST00000244709 PIK3R4Q99570 1358 aa16.17■□□□□ 0.18
TREM1-201ENST00000244709 TECPR2O15040 1411 aa16.17■□□□□ 0.18
TREM1-201ENST00000244709 ABCC11Q96J66 1382 aa16.16■□□□□ 0.18
TREM1-201ENST00000244709 NWD1Q149M9 1564 aa16.14■□□□□ 0.18
TREM1-201ENST00000244709 AMOTL2Q9Y2J4 779 aa16.14■□□□□ 0.17
TREM1-201ENST00000244709 CENPJQ9HC77 1338 aaPredicted RBP16.14■□□□□ 0.17
TREM1-201ENST00000244709 STRCP1A6NGW2 1772 aa16.13■□□□□ 0.17
TREM1-201ENST00000244709 ZNF316A6NFI3 1004 aaPredicted RBP16.13■□□□□ 0.17
TREM1-201ENST00000244709 ROBO2Q9HCK4 1378 aa16.13■□□□□ 0.17
TREM1-201ENST00000244709 PRAM1Q96QH2 718 aa16.12■□□□□ 0.17
TREM1-201ENST00000244709 PLEKHH1Q9ULM0 1364 aa16.12■□□□□ 0.17
TREM1-201ENST00000244709 PTCH1Q13635 1447 aa16.12■□□□□ 0.17
TREM1-201ENST00000244709 TESK2Q96S53 571 aa16.11■□□□□ 0.17
TREM1-201ENST00000244709 FAM135BQ49AJ0 1406 aa16.11■□□□□ 0.17
TREM1-201ENST00000244709 KCNA6P17658 529 aa16.11■□□□□ 0.17
TREM1-201ENST00000244709 SAFB2Q14151 953 aaKnown RBP eCLIP16.11■□□□□ 0.17
TREM1-201ENST00000244709 WAPLQ7Z5K2 1190 aa16.11■□□□□ 0.17
TREM1-201ENST00000244709 POGKQ9P215 609 aa16.1■□□□□ 0.17
TREM1-201ENST00000244709 SIRT1Q96EB6 747 aa16.09■□□□□ 0.17
TREM1-201ENST00000244709 SBNO2Q9Y2G9 1366 aa16.09■□□□□ 0.17
TREM1-201ENST00000244709 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.08■□□□□ 0.16
TREM1-201ENST00000244709 C11orf95C9JLR9 678 aaPredicted RBP16.08■□□□□ 0.16
TREM1-201ENST00000244709 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
TREM1-201ENST00000244709 DISP3Q9P2K9 1392 aa16.07■□□□□ 0.16
TREM1-201ENST00000244709 NKTRP30414 1462 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms