RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 NUDCQ9Y266 331 aa29.57■■■□□ 2.32
RNF39-201ENST00000244360 PANK3Q9H999 370 aa29.56■■■□□ 2.32
RNF39-201ENST00000244360 NEO1Q92859 1461 aa29.56■■■□□ 2.32
RNF39-201ENST00000244360 NRXN1Q9ULB1 1477 aa29.54■■■□□ 2.32
RNF39-201ENST00000244360 ABCA6Q8N139 1617 aa29.54■■■□□ 2.32
RNF39-201ENST00000244360 SYNMO15061 1565 aa29.53■■■□□ 2.32
RNF39-201ENST00000244360 MROH2AA6NES4 1674 aa29.53■■■□□ 2.32
RNF39-201ENST00000244360 EIF3AQ14152 1382 aaKnown RBP29.52■■■□□ 2.32
RNF39-201ENST00000244360 ZMYM4Q5VZL5 1548 aa29.52■■■□□ 2.32
RNF39-201ENST00000244360 ADGRB3O60242 1522 aa29.52■■■□□ 2.32
RNF39-201ENST00000244360 INSRP06213 1382 aa29.52■■■□□ 2.32
RNF39-201ENST00000244360 RNF123Q5XPI4 1314 aa29.51■■■□□ 2.31
RNF39-201ENST00000244360 CDCA8Q53HL2 280 aa29.49■■■□□ 2.31
RNF39-201ENST00000244360 NPATQ14207 1427 aa29.48■■■□□ 2.31
RNF39-201ENST00000244360 FANCIQ9NVI1 1328 aa29.45■■■□□ 2.31
RNF39-201ENST00000244360 ABCC3O15438 1527 aa29.45■■■□□ 2.3
RNF39-201ENST00000244360 ADGRF5Q8IZF2 1346 aa29.45■■■□□ 2.3
RNF39-201ENST00000244360 MYOM1P52179 1685 aa29.44■■■□□ 2.3
RNF39-201ENST00000244360 CC2D1BQ5T0F9 858 aaKnown RBP29.44■■■□□ 2.3
RNF39-201ENST00000244360 CFAP70Q5T0N1 1121 aa29.4■■■□□ 2.3
RNF39-201ENST00000244360 MYO3AQ8NEV4 1616 aa29.4■■■□□ 2.3
RNF39-201ENST00000244360 BLMP54132 1417 aaPredicted RBP29.4■■■□□ 2.3
RNF39-201ENST00000244360 DIP2CQ9Y2E4 1556 aa29.4■■■□□ 2.3
RNF39-201ENST00000244360 SETBP1Q9Y6X0 1596 aa29.4■■■□□ 2.3
RNF39-201ENST00000244360 KDM5AP29375 1690 aaKnown RBP29.39■■■□□ 2.3
RNF39-201ENST00000244360 SLC24A1O60721 1099 aa29.39■■■□□ 2.3
RNF39-201ENST00000244360 CAMSAP1Q5T5Y3 1602 aa29.37■■■□□ 2.29
RNF39-201ENST00000244360 PPLO60437 1756 aa29.36■■■□□ 2.29
RNF39-201ENST00000244360 RICTORQ6R327 1708 aa29.36■■■□□ 2.29
RNF39-201ENST00000244360 NOS1P29475 1434 aa29.36■■■□□ 2.29
RNF39-201ENST00000244360 NPC1L1Q9UHC9 1359 aa29.36■■■□□ 2.29
RNF39-201ENST00000244360 AMER1Q5JTC6 1135 aaPredicted RBP29.36■■■□□ 2.29
RNF39-201ENST00000244360 ASXL1Q8IXJ9 1541 aa29.35■■■□□ 2.29
RNF39-201ENST00000244360 ERVK-7P63135 1459 aa29.35■■■□□ 2.29
RNF39-201ENST00000244360 SBNO2Q9Y2G9 1366 aa29.35■■■□□ 2.29
RNF39-201ENST00000244360 GGT6Q6P531 493 aa29.35■■■□□ 2.29
RNF39-201ENST00000244360 KNSTRNQ9Y448 316 aa29.35■■■□□ 2.29
RNF39-201ENST00000244360 PIK3C2GO75747 1445 aa29.33■■■□□ 2.29
RNF39-201ENST00000244360 GLI2P10070 1586 aa29.33■■■□□ 2.29
RNF39-201ENST00000244360 RAPGEF3O95398 923 aa29.32■■■□□ 2.28
RNF39-201ENST00000244360 PDE3BQ13370 1112 aa29.32■■■□□ 2.28
RNF39-201ENST00000244360 PIK3C2BO00750 1634 aa29.31■■■□□ 2.28
RNF39-201ENST00000244360 RPGRIP1LQ68CZ1 1315 aa29.3■■■□□ 2.28
RNF39-201ENST00000244360 SENP3-EIF4A1A0A087X0R7 540 aa29.29■■■□□ 2.28
RNF39-201ENST00000244360 SIGLEC1Q9BZZ2 1709 aa29.29■■■□□ 2.28
RNF39-201ENST00000244360 ARHGAP31Q2M1Z3 1444 aa29.29■■■□□ 2.28
RNF39-201ENST00000244360 ZC3H13Q5T200 1668 aaKnown RBP29.29■■■□□ 2.28
RNF39-201ENST00000244360 ADGRB1O14514 1584 aa29.27■■■□□ 2.28
RNF39-201ENST00000244360 PPP2R1AP30153 589 aa29.26■■■□□ 2.28
RNF39-201ENST00000244360 C14orf93Q9H972 538 aaKnown RBP29.24■■■□□ 2.27
RNF39-201ENST00000244360 B4GALNT3Q6L9W6 998 aa29.24■■■□□ 2.27
RNF39-201ENST00000244360 CFAP65Q6ZU64 1925 aaKnown RBP29.24■■■□□ 2.27
RNF39-201ENST00000244360 CHGAP10645 457 aaKnown RBP29.22■■■□□ 2.27
RNF39-201ENST00000244360 MSH5O43196 834 aa29.2■■■□□ 2.27
RNF39-201ENST00000244360 YEATS2Q9ULM3 1422 aa29.2■■■□□ 2.26
RNF39-201ENST00000244360 CENPJQ9HC77 1338 aaPredicted RBP29.19■■■□□ 2.26
RNF39-201ENST00000244360 NEXMIFQ5QGS0 1516 aa29.18■■■□□ 2.26
RNF39-201ENST00000244360 QRICH2Q9H0J4 1663 aa29.15■■■□□ 2.26
RNF39-201ENST00000244360 ADAMTS8Q9UP79 889 aa29.14■■■□□ 2.26
RNF39-201ENST00000244360 RRP1P56182 461 aaKnown RBP29.14■■■□□ 2.26
RNF39-201ENST00000244360 RCAN3Q9UKA8 241 aa29.14■■■□□ 2.26
RNF39-201ENST00000244360 SALL2Q9Y467 1007 aaPredicted RBP29.13■■■□□ 2.25
RNF39-201ENST00000244360 CARD14Q9BXL6 1004 aa29.1■■■□□ 2.25
RNF39-201ENST00000244360 RIMBP3CA6NJZ7 1639 aa29.1■■■□□ 2.25
RNF39-201ENST00000244360 RIMBP3BA6NNM3 1639 aa29.1■■■□□ 2.25
RNF39-201ENST00000244360 RIMBP3Q9UFD9 1639 aa29.1■■■□□ 2.25
RNF39-201ENST00000244360 DIP2BQ9P265 1576 aa29.1■■■□□ 2.25
RNF39-201ENST00000244360 CYB5RLQ6IPT4 315 aa29.1■■■□□ 2.25
RNF39-201ENST00000244360 ERICH6Q7L0X2 663 aa29.1■■■□□ 2.25
RNF39-201ENST00000244360 ZFYVE9O95405 1425 aa29.1■■■□□ 2.25
RNF39-201ENST00000244360 CDCA7LQ96GN5 454 aa29.09■■■□□ 2.25
RNF39-201ENST00000244360 WDR43Q15061 677 aaKnown RBP eCLIP29.09■■■□□ 2.25
RNF39-201ENST00000244360 TRAK1Q9UPV9 953 aa29.08■■■□□ 2.25
RNF39-201ENST00000244360 VGFO15240 615 aaPredicted RBP29.07■■■□□ 2.24
RNF39-201ENST00000244360 PREX1Q8TCU6 1659 aa29.06■■■□□ 2.24
RNF39-201ENST00000244360 SLC52A1Q9NWF4 448 aa29.06■■■□□ 2.24
RNF39-201ENST00000244360 ARHGEF28Q8N1W1 1705 aaKnown RBP29.04■■■□□ 2.24
RNF39-201ENST00000244360 CCDC136Q96JN2 1154 aa29.04■■■□□ 2.24
RNF39-201ENST00000244360 IDI1Q13907 227 aa29.03■■■□□ 2.24
RNF39-201ENST00000244360 TMEM132EQ6IEE7 984 aa29.03■■■□□ 2.24
RNF39-201ENST00000244360 REREQ9P2R6 1566 aa29.03■■■□□ 2.24
RNF39-201ENST00000244360 PUS7Q96PZ0 661 aaKnown RBP29.02■■■□□ 2.24
RNF39-201ENST00000244360 ZNF521Q96K83 1311 aa29.02■■■□□ 2.24
RNF39-201ENST00000244360 TMEM131LA2VDJ0 1609 aa29.01■■■□□ 2.24
RNF39-201ENST00000244360 USP32Q8NFA0 1604 aa29.01■■■□□ 2.24
RNF39-201ENST00000244360 PLEKHH1Q9ULM0 1364 aa29.01■■■□□ 2.23
RNF39-201ENST00000244360 FAM69CQ0P6D2 419 aa28.98■■■□□ 2.23
RNF39-201ENST00000244360 NSD3Q9BZ95 1437 aa28.97■■■□□ 2.23
RNF39-201ENST00000244360 AGLP35573 1532 aa28.97■■■□□ 2.23
RNF39-201ENST00000244360 TULP4Q9NRJ4 1543 aa28.97■■■□□ 2.23
RNF39-201ENST00000244360 MYO5BQ9ULV0 1848 aa28.95■■■□□ 2.22
RNF39-201ENST00000244360 POLR3AO14802 1390 aaPredicted RBP28.94■■■□□ 2.22
RNF39-201ENST00000244360 EXOC6Q8TAG9 804 aa28.92■■■□□ 2.22
RNF39-201ENST00000244360 NUTM2DQ5VT03 806 aaPredicted RBP28.92■■■□□ 2.22
RNF39-201ENST00000244360 SLC12A5Q9H2X9 1139 aa28.92■■■□□ 2.22
RNF39-201ENST00000244360 EVC2Q86UK5 1308 aa28.91■■■□□ 2.22
RNF39-201ENST00000244360 DUSP27Q5VZP5 1158 aa28.9■■■□□ 2.22
RNF39-201ENST00000244360 PPP6R1Q9UPN7 881 aa28.89■■■□□ 2.21
RNF39-201ENST00000244360 GOLGA2Q08379 1002 aa28.88■■■□□ 2.21
RNF39-201ENST00000244360 ANKRD36BQ8N2N9 1353 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms