RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 RIMS2Q9UQ26 1411 aa22.82■■□□□ 1.24
RAB38-201ENST00000243662 IQGAP1P46940 1657 aa22.82■■□□□ 1.24
RAB38-201ENST00000243662 NEXMIFQ5QGS0 1516 aa22.82■■□□□ 1.24
RAB38-201ENST00000243662 PPLO60437 1756 aa22.8■■□□□ 1.24
RAB38-201ENST00000243662 IFT172Q9UG01 1749 aa22.8■■□□□ 1.24
RAB38-201ENST00000243662 TXNDC2Q86VQ3 553 aa22.79■■□□□ 1.24
RAB38-201ENST00000243662 NPHP4O75161 1426 aaPredicted RBP22.78■■□□□ 1.24
RAB38-201ENST00000243662 DMRT2Q9Y5R5 561 aa22.78■■□□□ 1.24
RAB38-201ENST00000243662 EID1Q9Y6B2 187 aa22.78■■□□□ 1.24
RAB38-201ENST00000243662 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.74■■□□□ 1.23
RAB38-201ENST00000243662 HDGFP51858 240 aaKnown RBP22.73■■□□□ 1.23
RAB38-201ENST00000243662 ZNF326Q5BKZ1 582 aaKnown RBP22.73■■□□□ 1.23
RAB38-201ENST00000243662 RPGRIP1LQ68CZ1 1315 aa22.72■■□□□ 1.23
RAB38-201ENST00000243662 PLEKHG1Q9ULL1 1385 aa22.72■■□□□ 1.23
RAB38-201ENST00000243662 NRXN3Q9Y4C0 1643 aa22.71■■□□□ 1.23
RAB38-201ENST00000243662 NUTM2DQ5VT03 806 aaPredicted RBP22.69■■□□□ 1.22
RAB38-201ENST00000243662 SETBP1Q9Y6X0 1596 aa22.69■■□□□ 1.22
RAB38-201ENST00000243662 RGL3Q3MIN7 710 aa22.68■■□□□ 1.22
RAB38-201ENST00000243662 PPP1R15AO75807 674 aaPredicted RBP22.66■■□□□ 1.22
RAB38-201ENST00000243662 ADAMTS13Q76LX8 1427 aa22.66■■□□□ 1.22
RAB38-201ENST00000243662 DIP2AQ14689 1571 aa22.65■■□□□ 1.22
RAB38-201ENST00000243662 VGFO15240 615 aaPredicted RBP22.64■■□□□ 1.21
RAB38-201ENST00000243662 SETD1AO15047 1707 aaKnown RBP22.64■■□□□ 1.21
RAB38-201ENST00000243662 MYOM2P54296 1465 aa22.63■■□□□ 1.21
RAB38-201ENST00000243662 STRCP1A6NGW2 1772 aa22.63■■□□□ 1.21
RAB38-201ENST00000243662 SIN3AQ96ST3 1273 aa22.63■■□□□ 1.21
RAB38-201ENST00000243662 LTBP4Q8N2S1 1624 aa22.62■■□□□ 1.21
RAB38-201ENST00000243662 NRXN1Q9ULB1 1477 aa22.61■■□□□ 1.21
RAB38-201ENST00000243662 CHD2O14647 1828 aaKnown RBP22.61■■□□□ 1.21
RAB38-201ENST00000243662 SLC26A8Q96RN1 970 aa22.6■■□□□ 1.21
RAB38-201ENST00000243662 ADGRF5Q8IZF2 1346 aa22.6■■□□□ 1.21
RAB38-201ENST00000243662 ZNF335Q9H4Z2 1342 aaPredicted RBP22.59■■□□□ 1.21
RAB38-201ENST00000243662 TBX22Q9Y458 520 aa22.59■■□□□ 1.21
RAB38-201ENST00000243662 SENP3Q9H4L4 574 aaPredicted RBP22.58■■□□□ 1.2
RAB38-201ENST00000243662 ALKQ9UM73 1620 aa22.58■■□□□ 1.2
RAB38-201ENST00000243662 PIK3C2GO75747 1445 aa22.58■■□□□ 1.2
RAB38-201ENST00000243662 NWD1Q149M9 1564 aa22.57■■□□□ 1.2
RAB38-201ENST00000243662 BCANQ96GW7 911 aa22.56■■□□□ 1.2
RAB38-201ENST00000243662 STAC3Q96MF2 364 aa22.55■■□□□ 1.2
RAB38-201ENST00000243662 CLSPNQ9HAW4 1339 aa22.55■■□□□ 1.2
RAB38-201ENST00000243662 PIK3R4Q99570 1358 aa22.54■■□□□ 1.2
RAB38-201ENST00000243662 NEUROD1Q13562 356 aa22.54■■□□□ 1.2
RAB38-201ENST00000243662 DCAF11Q8TEB1 546 aa22.54■■□□□ 1.2
RAB38-201ENST00000243662 LAMC1P11047 1609 aa22.53■■□□□ 1.2
RAB38-201ENST00000243662 CPS1P31327 1500 aa22.53■■□□□ 1.2
RAB38-201ENST00000243662 XRN1Q8IZH2 1706 aaKnown RBP22.52■■□□□ 1.19
RAB38-201ENST00000243662 METP08581 1390 aa22.51■■□□□ 1.19
RAB38-201ENST00000243662 PTPRUQ92729 1446 aa22.51■■□□□ 1.19
RAB38-201ENST00000243662 L3MBTL2Q969R5 705 aa22.5■■□□□ 1.19
RAB38-201ENST00000243662 KCNA6P17658 529 aa22.49■■□□□ 1.19
RAB38-201ENST00000243662 ASXL1Q8IXJ9 1541 aa22.49■■□□□ 1.19
RAB38-201ENST00000243662 XIRP1Q702N8 1843 aaKnown RBP22.48■■□□□ 1.19
RAB38-201ENST00000243662 KDM2AQ9Y2K7 1162 aa22.48■■□□□ 1.19
RAB38-201ENST00000243662 NKTRP30414 1462 aaKnown RBP22.48■■□□□ 1.19
RAB38-201ENST00000243662 C14orf93Q9H972 538 aaKnown RBP22.47■■□□□ 1.19
RAB38-201ENST00000243662 KIAA1210Q9ULL0 1709 aa22.46■■□□□ 1.19
RAB38-201ENST00000243662 LRRC7Q96NW7 1537 aa22.45■■□□□ 1.19
RAB38-201ENST00000243662 PRAG1Q86YV5 1406 aa22.45■■□□□ 1.18
RAB38-201ENST00000243662 CCER1Q8TC90 406 aaPredicted RBP22.45■■□□□ 1.18
RAB38-201ENST00000243662 CFAP70Q5T0N1 1121 aa22.43■■□□□ 1.18
RAB38-201ENST00000243662 IQSEC2Q5JU85 1478 aa22.43■■□□□ 1.18
RAB38-201ENST00000243662 ADGRB1O14514 1584 aa22.43■■□□□ 1.18
RAB38-201ENST00000243662 KNDC1Q76NI1 1749 aa22.42■■□□□ 1.18
RAB38-201ENST00000243662 TONSLQ96HA7 1378 aa22.42■■□□□ 1.18
RAB38-201ENST00000243662 CERKQ8TCT0 537 aa22.41■■□□□ 1.18
RAB38-201ENST00000243662 AMOTL2Q9Y2J4 779 aa22.41■■□□□ 1.18
RAB38-201ENST00000243662 TRPM1Q7Z4N2 1603 aa22.4■■□□□ 1.18
RAB38-201ENST00000243662 TECPR2O15040 1411 aa22.37■■□□□ 1.17
RAB38-201ENST00000243662 LRPPRCP42704 1394 aaKnown RBP22.37■■□□□ 1.17
RAB38-201ENST00000243662 TMEM132EQ6IEE7 984 aa22.37■■□□□ 1.17
RAB38-201ENST00000243662 PTCH1Q13635 1447 aa22.37■■□□□ 1.17
RAB38-201ENST00000243662 YTHDC2Q9H6S0 1430 aaKnown RBP22.37■■□□□ 1.17
RAB38-201ENST00000243662 TMEM94Q12767 1356 aa22.35■■□□□ 1.17
RAB38-201ENST00000243662 ABCC11Q96J66 1382 aa22.35■■□□□ 1.17
RAB38-201ENST00000243662 PROSER2Q86WR7 435 aaPredicted RBP22.34■■□□□ 1.17
RAB38-201ENST00000243662 TIMELESSQ9UNS1 1208 aa22.34■■□□□ 1.17
RAB38-201ENST00000243662 NCOA3Q9Y6Q9 1424 aa22.34■■□□□ 1.17
RAB38-201ENST00000243662 ROBO2Q9HCK4 1378 aa22.33■■□□□ 1.17
RAB38-201ENST00000243662 NBPF8Q3BBV2 869 aa22.33■■□□□ 1.16
RAB38-201ENST00000243662 DLC1Q96QB1 1528 aa22.31■■□□□ 1.16
RAB38-201ENST00000243662 RBM33Q96EV2 1170 aaKnown RBP22.3■■□□□ 1.16
RAB38-201ENST00000243662 NALCNQ8IZF0 1738 aa22.3■■□□□ 1.16
RAB38-201ENST00000243662 ARHGEF28Q8N1W1 1705 aaKnown RBP22.3■■□□□ 1.16
RAB38-201ENST00000243662 NBPF1Q3BBV0 1214 aa22.29■■□□□ 1.16
RAB38-201ENST00000243662 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.28■■□□□ 1.16
RAB38-201ENST00000243662 SIRT1Q96EB6 747 aa22.28■■□□□ 1.16
RAB38-201ENST00000243662 STK26Q9P289 416 aa22.28■■□□□ 1.16
RAB38-201ENST00000243662 FAM135BQ49AJ0 1406 aa22.27■■□□□ 1.16
RAB38-201ENST00000243662 RALGAPBQ86X10 1494 aa22.27■■□□□ 1.16
RAB38-201ENST00000243662 ADGRL3Q9HAR2 1447 aa22.24■■□□□ 1.15
RAB38-201ENST00000243662 GPRASP1Q5JY77 1395 aa22.24■■□□□ 1.15
RAB38-201ENST00000243662 PLEKHH1Q9ULM0 1364 aa22.23■■□□□ 1.15
RAB38-201ENST00000243662 MSH6P52701 1360 aa22.22■■□□□ 1.15
RAB38-201ENST00000243662 WAPLQ7Z5K2 1190 aa22.22■■□□□ 1.15
RAB38-201ENST00000243662 TRAK1Q9UPV9 953 aa22.22■■□□□ 1.15
RAB38-201ENST00000243662 DCCP43146 1447 aa22.21■■□□□ 1.15
RAB38-201ENST00000243662 ROCK2O75116 1388 aaKnown RBP22.21■■□□□ 1.15
RAB38-201ENST00000243662 C19orf44Q9H6X5 657 aa22.21■■□□□ 1.15
RAB38-201ENST00000243662 CDC42BPGQ6DT37 1551 aa22.18■■□□□ 1.14
RAB38-201ENST00000243662 PRAM1Q96QH2 718 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms