RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 UBR1Q8IWV7 1749 aa13.68□□□□□ -0.22
TGFB3-201ENST00000238682 TET3O43151 1660 aa13.67□□□□□ -0.22
TGFB3-201ENST00000238682 RAB3GAP2Q9H2M9 1393 aa13.66□□□□□ -0.22
TGFB3-201ENST00000238682 ANKRD50Q9ULJ7 1429 aa13.66□□□□□ -0.22
TGFB3-201ENST00000238682 NOS1P29475 1434 aa13.66□□□□□ -0.22
TGFB3-201ENST00000238682 SCAF11Q99590 1463 aaKnown RBP13.66□□□□□ -0.22
TGFB3-201ENST00000238682 ADGRB3O60242 1522 aa13.65□□□□□ -0.22
TGFB3-201ENST00000238682 NCKAP5LQ9HCH0 1330 aa13.65□□□□□ -0.22
TGFB3-201ENST00000238682 NPM2Q86SE8 214 aaKnown RBP13.62□□□□□ -0.23
TGFB3-201ENST00000238682 SLC52A1Q9NWF4 448 aa13.62□□□□□ -0.23
TGFB3-201ENST00000238682 IQGAP3Q86VI3 1631 aa13.62□□□□□ -0.23
TGFB3-201ENST00000238682 VSIG10Q8N0Z9 540 aa13.61□□□□□ -0.23
TGFB3-201ENST00000238682 BCL11AQ9H165 835 aa13.61□□□□□ -0.23
TGFB3-201ENST00000238682 C14orf37Q86TY3 774 aa13.6□□□□□ -0.23
TGFB3-201ENST00000238682 ITGAEP38570 1179 aa13.6□□□□□ -0.23
TGFB3-201ENST00000238682 FBXO31Q5XUX0 539 aaPredicted RBP13.6□□□□□ -0.23
TGFB3-201ENST00000238682 PIK3C2BO00750 1634 aa13.59□□□□□ -0.23
TGFB3-201ENST00000238682 HDGFP51858 240 aaKnown RBP13.59□□□□□ -0.23
TGFB3-201ENST00000238682 EID1Q9Y6B2 187 aa13.59□□□□□ -0.23
TGFB3-201ENST00000238682 DIP2AQ14689 1571 aa13.59□□□□□ -0.23
TGFB3-201ENST00000238682 ZEB1P37275 1124 aaPredicted RBP13.59□□□□□ -0.23
TGFB3-201ENST00000238682 TMEM2Q9UHN6 1383 aa13.58□□□□□ -0.23
TGFB3-201ENST00000238682 RRP7BPQ9NSQ0 103 aa13.58□□□□□ -0.23
TGFB3-201ENST00000238682 NWD1Q149M9 1564 aa13.58□□□□□ -0.24
TGFB3-201ENST00000238682 NKTRP30414 1462 aaKnown RBP13.57□□□□□ -0.24
TGFB3-201ENST00000238682 ZNF335Q9H4Z2 1342 aaPredicted RBP13.56□□□□□ -0.24
TGFB3-201ENST00000238682 DHX57Q6P158 1386 aaKnown RBP13.56□□□□□ -0.24
TGFB3-201ENST00000238682 NCOA3Q9Y6Q9 1424 aa13.56□□□□□ -0.24
TGFB3-201ENST00000238682 TOM1O60784 492 aa13.56□□□□□ -0.24
TGFB3-201ENST00000238682 CHIC2Q9UKJ5 165 aa13.56□□□□□ -0.24
TGFB3-201ENST00000238682 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.54□□□□□ -0.24
TGFB3-201ENST00000238682 PIK3R4Q99570 1358 aa13.53□□□□□ -0.24
TGFB3-201ENST00000238682 LRRC7Q96NW7 1537 aa13.53□□□□□ -0.24
TGFB3-201ENST00000238682 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.24
TGFB3-201ENST00000238682 PLEKHG1Q9ULL1 1385 aa13.52□□□□□ -0.25
TGFB3-201ENST00000238682 UBAP1LF5GYI3 381 aa13.5□□□□□ -0.25
TGFB3-201ENST00000238682 EIF5BO60841 1220 aaKnown RBP13.5□□□□□ -0.25
TGFB3-201ENST00000238682 CCER1Q8TC90 406 aaPredicted RBP13.5□□□□□ -0.25
TGFB3-201ENST00000238682 ZFYVE9O95405 1425 aa13.5□□□□□ -0.25
TGFB3-201ENST00000238682 TMEM131LA2VDJ0 1609 aa13.5□□□□□ -0.25
TGFB3-201ENST00000238682 TXNDC2Q86VQ3 553 aa13.49□□□□□ -0.25
TGFB3-201ENST00000238682 PPP4R3CPQ6ZMV5 832 aa13.48□□□□□ -0.25
TGFB3-201ENST00000238682 STAG3Q9UJ98 1225 aa13.48□□□□□ -0.25
TGFB3-201ENST00000238682 E9PCH4 1651 aa13.48□□□□□ -0.25
TGFB3-201ENST00000238682 NUP155O75694 1391 aa13.47□□□□□ -0.25
TGFB3-201ENST00000238682 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.25
TGFB3-201ENST00000238682 KCNA6P17658 529 aa13.46□□□□□ -0.25
TGFB3-201ENST00000238682 MPHOSPH9Q99550 1183 aa13.46□□□□□ -0.25
TGFB3-201ENST00000238682 RIMS2Q9UQ26 1411 aa13.45□□□□□ -0.26
TGFB3-201ENST00000238682 IDI1Q13907 227 aa13.45□□□□□ -0.26
TGFB3-201ENST00000238682 TRPM2O94759 1503 aa13.45□□□□□ -0.26
TGFB3-201ENST00000238682 CENPBP07199 599 aaPredicted RBP13.44□□□□□ -0.26
TGFB3-201ENST00000238682 STRCP1A6NGW2 1772 aa13.44□□□□□ -0.26
TGFB3-201ENST00000238682 TRIM52Q96A61 297 aa13.44□□□□□ -0.26
TGFB3-201ENST00000238682 FAM135BQ49AJ0 1406 aa13.44□□□□□ -0.26
TGFB3-201ENST00000238682 SPHKAPQ2M3C7 1700 aa13.44□□□□□ -0.26
TGFB3-201ENST00000238682 SETBP1Q9Y6X0 1596 aa13.43□□□□□ -0.26
TGFB3-201ENST00000238682 ALKQ9UM73 1620 aa13.43□□□□□ -0.26
TGFB3-201ENST00000238682 TBX22Q9Y458 520 aa13.43□□□□□ -0.26
TGFB3-201ENST00000238682 LTKP29376 864 aa13.42□□□□□ -0.26
TGFB3-201ENST00000238682 ANKRD30BQ9BXX2 1392 aa13.41□□□□□ -0.26
TGFB3-201ENST00000238682 PRAG1Q86YV5 1406 aa13.41□□□□□ -0.26
TGFB3-201ENST00000238682 DCCP43146 1447 aa13.4□□□□□ -0.26
TGFB3-201ENST00000238682 CHD2O14647 1828 aaKnown RBP13.38□□□□□ -0.27
TGFB3-201ENST00000238682 MED1Q15648 1581 aaPredicted RBP13.38□□□□□ -0.27
TGFB3-201ENST00000238682 DISP3Q9P2K9 1392 aa13.38□□□□□ -0.27
TGFB3-201ENST00000238682 STAC3Q96MF2 364 aa13.38□□□□□ -0.27
TGFB3-201ENST00000238682 RPGRIP1LQ68CZ1 1315 aa13.37□□□□□ -0.27
TGFB3-201ENST00000238682 XIRP1Q702N8 1843 aaKnown RBP13.37□□□□□ -0.27
TGFB3-201ENST00000238682 MSH6P52701 1360 aa13.37□□□□□ -0.27
TGFB3-201ENST00000238682 PLEKHG5O94827 1062 aa13.36□□□□□ -0.27
TGFB3-201ENST00000238682 PPP1R15AO75807 674 aaPredicted RBP13.36□□□□□ -0.27
TGFB3-201ENST00000238682 ADAMTS13Q76LX8 1427 aa13.35□□□□□ -0.27
TGFB3-201ENST00000238682 TMEM94Q12767 1356 aa13.34□□□□□ -0.27
TGFB3-201ENST00000238682 XRN1Q8IZH2 1706 aaKnown RBP13.34□□□□□ -0.27
TGFB3-201ENST00000238682 CCDC144AA2RUR9 1427 aa13.32□□□□□ -0.28
TGFB3-201ENST00000238682 KIF1BO60333 1816 aa13.32□□□□□ -0.28
TGFB3-201ENST00000238682 NEXMIFQ5QGS0 1516 aa13.32□□□□□ -0.28
TGFB3-201ENST00000238682 MYO5BQ9ULV0 1848 aa13.31□□□□□ -0.28
TGFB3-201ENST00000238682 CLTCL1P53675 1640 aa13.31□□□□□ -0.28
TGFB3-201ENST00000238682 AHDC1Q5TGY3 1603 aaPredicted RBP13.31□□□□□ -0.28
TGFB3-201ENST00000238682 HSPA1LP34931 641 aa13.31□□□□□ -0.28
TGFB3-201ENST00000238682 PROSER2Q86WR7 435 aaPredicted RBP13.31□□□□□ -0.28
TGFB3-201ENST00000238682 FOXD4L1Q9NU39 408 aa13.31□□□□□ -0.28
TGFB3-201ENST00000238682 CFAP65Q6ZU64 1925 aaKnown RBP13.31□□□□□ -0.28
TGFB3-201ENST00000238682 SOCS7O14512 581 aa13.3□□□□□ -0.28
TGFB3-201ENST00000238682 PTCH1Q13635 1447 aa13.3□□□□□ -0.28
TGFB3-201ENST00000238682 NRXN3Q9Y4C0 1643 aa13.29□□□□□ -0.28
TGFB3-201ENST00000238682 TONSLQ96HA7 1378 aa13.28□□□□□ -0.28
TGFB3-201ENST00000238682 CADPS2Q86UW7 1296 aa13.28□□□□□ -0.28
TGFB3-201ENST00000238682 ROBO1Q9Y6N7 1651 aa13.28□□□□□ -0.28
TGFB3-201ENST00000238682 PIP4K2BP78356 416 aa13.27□□□□□ -0.29
TGFB3-201ENST00000238682 VGFO15240 615 aaPredicted RBP13.26□□□□□ -0.29
TGFB3-201ENST00000238682 SPATA31E1Q6ZUB1 1445 aa13.25□□□□□ -0.29
TGFB3-201ENST00000238682 C19orf44Q9H6X5 657 aa13.25□□□□□ -0.29
TGFB3-201ENST00000238682 JCADQ9P266 1359 aa13.25□□□□□ -0.29
TGFB3-201ENST00000238682 LAMC1P11047 1609 aa13.24□□□□□ -0.29
TGFB3-201ENST00000238682 MYOM2P54296 1465 aa13.24□□□□□ -0.29
TGFB3-201ENST00000238682 SLC26A8Q96RN1 970 aa13.24□□□□□ -0.29
TGFB3-201ENST00000238682 ADGRL3Q9HAR2 1447 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms