RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 PATL2C9JE40 543 aaKnown RBP5.7□□□□□ -1.5
CDH9-201ENST00000231021 NAALADL2Q58DX5 795 aa5.7□□□□□ -1.5
CDH9-201ENST00000231021 GLMNQ92990 594 aa5.7□□□□□ -1.5
CDH9-201ENST00000231021 CALR3Q96L12 384 aaKnown RBP5.7□□□□□ -1.5
CDH9-201ENST00000231021 CLCN6P51797 869 aa5.7□□□□□ -1.5
CDH9-201ENST00000231021 ADAMTS19Q8TE59 1207 aa5.7□□□□□ -1.5
CDH9-201ENST00000231021 ATP1B4Q9UN42 357 aaPredicted RBP5.7□□□□□ -1.5
CDH9-201ENST00000231021 G3BP2Q9UN86 482 aaKnown RBP5.7□□□□□ -1.5
CDH9-201ENST00000231021 KIF4AO95239 1232 aa5.69□□□□□ -1.5
CDH9-201ENST00000231021 SOX12O15370 315 aa5.69□□□□□ -1.5
CDH9-201ENST00000231021 GRIPAP1Q4V328 841 aa5.69□□□□□ -1.5
CDH9-201ENST00000231021 HELBQ8NG08 1087 aaPredicted RBP5.69□□□□□ -1.5
CDH9-201ENST00000231021 BICRAQ9NZM4 1560 aa5.68□□□□□ -1.5
CDH9-201ENST00000231021 DNAJC14Q6Y2X3 702 aaPredicted RBP5.68□□□□□ -1.5
CDH9-201ENST00000231021 POLR3EQ9NVU0 708 aa5.68□□□□□ -1.5
CDH9-201ENST00000231021 GPR37O15354 613 aa5.68□□□□□ -1.5
CDH9-201ENST00000231021 PIP4P2Q8N4L2 257 aa5.68□□□□□ -1.5
CDH9-201ENST00000231021 TTLL12Q14166 644 aaPredicted RBP5.67□□□□□ -1.5
CDH9-201ENST00000231021 RALBP1Q15311 655 aa5.67□□□□□ -1.5
CDH9-201ENST00000231021 NLGN1Q8N2Q7 840 aa5.67□□□□□ -1.5
CDH9-201ENST00000231021 DDRGK1Q96HY6 314 aa5.67□□□□□ -1.5
CDH9-201ENST00000231021 PIF1Q9H611 641 aa5.67□□□□□ -1.5
CDH9-201ENST00000231021 SETQ01105 290 aaPredicted RBP5.66□□□□□ -1.5
CDH9-201ENST00000231021 DHX38Q92620 1227 aaKnown RBP5.66□□□□□ -1.5
CDH9-201ENST00000231021 SPOCK3Q9BQ16 436 aa5.66□□□□□ -1.5
CDH9-201ENST00000231021 BCL2L13Q9BXK5 485 aa5.66□□□□□ -1.5
CDH9-201ENST00000231021 IQSEC3Q9UPP2 1182 aaPredicted RBP5.66□□□□□ -1.5
CDH9-201ENST00000231021 KCNA1Q09470 495 aa5.66□□□□□ -1.5
CDH9-201ENST00000231021 TMX4Q9H1E5 349 aaPredicted RBP5.66□□□□□ -1.5
CDH9-201ENST00000231021 NCKAP5LQ9HCH0 1330 aa5.65□□□□□ -1.5
CDH9-201ENST00000231021 ERICH6BQ5W0A0 696 aa5.65□□□□□ -1.5
CDH9-201ENST00000231021 CCER1Q8TC90 406 aaPredicted RBP5.65□□□□□ -1.5
CDH9-201ENST00000231021 NLRP7Q8WX94 980 aa5.65□□□□□ -1.5
CDH9-201ENST00000231021 LNPKQ9C0E8 428 aa5.65□□□□□ -1.51
CDH9-201ENST00000231021 RECKO95980 971 aa5.64□□□□□ -1.51
CDH9-201ENST00000231021 CHRM1P11229 460 aaPredicted RBP5.64□□□□□ -1.51
CDH9-201ENST00000231021 LARGE2Q8N3Y3 721 aa5.64□□□□□ -1.51
CDH9-201ENST00000231021 PSME1Q06323 249 aa5.64□□□□□ -1.51
CDH9-201ENST00000231021 PRR12Q9ULL5 1215 aa5.64□□□□□ -1.51
CDH9-201ENST00000231021 CREB3O43889 395 aa5.63□□□□□ -1.51
CDH9-201ENST00000231021 ABL2P42684 1182 aa5.63□□□□□ -1.51
CDH9-201ENST00000231021 CFAP70Q5T0N1 1121 aa5.63□□□□□ -1.51
CDH9-201ENST00000231021 TBC1D2Q9BYX2 928 aa5.63□□□□□ -1.51
CDH9-201ENST00000231021 WRNQ14191 1432 aaPredicted RBP eCLIP5.63□□□□□ -1.51
CDH9-201ENST00000231021 CCER2I3L3R5 266 aa5.63□□□□□ -1.51
CDH9-201ENST00000231021 TSNAXIP1Q2TAA8 658 aa5.63□□□□□ -1.51
CDH9-201ENST00000231021 THOC2Q8NI27 1593 aaKnown RBP5.63□□□□□ -1.51
CDH9-201ENST00000231021 TMEM88BA6NKF7 163 aa5.63□□□□□ -1.51
CDH9-201ENST00000231021 ZFYVE27Q5T4F4 411 aa5.63□□□□□ -1.51
CDH9-201ENST00000231021 SPACA7Q96KW9 195 aa5.63□□□□□ -1.51
CDH9-201ENST00000231021 OXER1Q8TDS5 423 aa5.62□□□□□ -1.51
CDH9-201ENST00000231021 PYGBP11216 843 aa5.62□□□□□ -1.51
CDH9-201ENST00000231021 GIGYF2Q6Y7W6 1299 aaKnown RBP5.62□□□□□ -1.51
CDH9-201ENST00000231021 UBXN4Q92575 508 aa5.62□□□□□ -1.51
CDH9-201ENST00000231021 U2SURPO15042 1029 aaKnown RBP5.61□□□□□ -1.51
CDH9-201ENST00000231021 SH3BP5O60239 455 aa5.61□□□□□ -1.51
CDH9-201ENST00000231021 FAM193AP78312 1265 aa5.61□□□□□ -1.51
CDH9-201ENST00000231021 SRPK2P78362 688 aaKnown RBP5.61□□□□□ -1.51
CDH9-201ENST00000231021 DCAF8Q5TAQ9 597 aa5.61□□□□□ -1.51
CDH9-201ENST00000231021 DMGDHQ9UI17 866 aaKnown RBP5.61□□□□□ -1.51
CDH9-201ENST00000231021 TBC1D2BQ9UPU7 963 aa5.61□□□□□ -1.51
CDH9-201ENST00000231021 FARP1Q9Y4F1 1045 aaPredicted RBP5.61□□□□□ -1.51
CDH9-201ENST00000231021 CCDC194A0A1B0GVG4 234 aa5.61□□□□□ -1.51
CDH9-201ENST00000231021 TBC1D12O60347 775 aa5.61□□□□□ -1.51
CDH9-201ENST00000231021 TCEAL1Q15170 157 aa5.61□□□□□ -1.51
CDH9-201ENST00000231021 PCMTD1Q96MG8 357 aaPredicted RBP5.61□□□□□ -1.51
CDH9-201ENST00000231021 FAN1Q9Y2M0 1017 aa5.61□□□□□ -1.51
CDH9-201ENST00000231021 SERPINB4P48594 390 aa5.61□□□□□ -1.51
CDH9-201ENST00000231021 PBXIP1Q96AQ6 731 aa5.61□□□□□ -1.51
CDH9-201ENST00000231021 CHPF2Q9P2E5 772 aa5.61□□□□□ -1.51
CDH9-201ENST00000231021 SUPT16HQ9Y5B9 1047 aaKnown RBP5.61□□□□□ -1.51
CDH9-201ENST00000231021 RIMBP3CA6NJZ7 1639 aa5.6□□□□□ -1.51
CDH9-201ENST00000231021 RIMBP3BA6NNM3 1639 aa5.6□□□□□ -1.51
CDH9-201ENST00000231021 RIMBP3Q9UFD9 1639 aa5.6□□□□□ -1.51
CDH9-201ENST00000231021 VGFO15240 615 aaPredicted RBP5.6□□□□□ -1.51
CDH9-201ENST00000231021 RAVER1Q8IY67 606 aaKnown RBP5.6□□□□□ -1.51
CDH9-201ENST00000231021 LARP6Q9BRS8 491 aaKnown RBP5.6□□□□□ -1.51
CDH9-201ENST00000231021 MFRPQ9BY79 579 aa5.6□□□□□ -1.51
CDH9-201ENST00000231021 MCCP23508 829 aa5.6□□□□□ -1.51
CDH9-201ENST00000231021 LMOD3Q0VAK6 560 aa5.6□□□□□ -1.51
CDH9-201ENST00000231021 ZC3H6P61129 1189 aaKnown RBP5.59□□□□□ -1.51
CDH9-201ENST00000231021 CCDC144BQ3MJ40 725 aa5.59□□□□□ -1.51
CDH9-201ENST00000231021 ZNF467Q7Z7K2 595 aaPredicted RBP5.59□□□□□ -1.51
CDH9-201ENST00000231021 MKRN1Q9UHC7 482 aaKnown RBP5.59□□□□□ -1.51
CDH9-201ENST00000231021 ERBB3P21860 1342 aa5.59□□□□□ -1.51
CDH9-201ENST00000231021 C19orf67A6NJJ6 358 aa5.59□□□□□ -1.51
CDH9-201ENST00000231021 EVA1CP58658 441 aa5.59□□□□□ -1.51
CDH9-201ENST00000231021 PHLDB3Q6NSJ2 640 aa5.59□□□□□ -1.51
CDH9-201ENST00000231021 C11orf96Q7Z7L8 435 aa5.59□□□□□ -1.51
CDH9-201ENST00000231021 STAG1Q8WVM7 1258 aa5.59□□□□□ -1.51
CDH9-201ENST00000231021 VRTNQ9H8Y1 702 aa5.59□□□□□ -1.51
CDH9-201ENST00000231021 LMTK3Q96Q04 1460 aa5.59□□□□□ -1.51
CDH9-201ENST00000231021 CCDC189A1A4V9 331 aa5.59□□□□□ -1.52
CDH9-201ENST00000231021 PRR29P0C7W0 189 aa5.59□□□□□ -1.52
CDH9-201ENST00000231021 CSB-PGBD3P0DP91 1061 aa5.59□□□□□ -1.52
CDH9-201ENST00000231021 TSR1Q2NL82 804 aaKnown RBP5.59□□□□□ -1.52
CDH9-201ENST00000231021 MTMR14Q8NCE2 650 aa5.59□□□□□ -1.52
CDH9-201ENST00000231021 TNNI2P48788 182 aa5.58□□□□□ -1.52
CDH9-201ENST00000231021 RHBDL3P58872 404 aa5.58□□□□□ -1.52
CDH9-201ENST00000231021 PMFBP1Q8TBY8 1022 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms