RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 LTV1Q96GA3 475 aaPredicted RBP10.29□□□□□ -0.76
NANOG-201ENST00000229307 HDAC5Q9UQL6 1122 aa10.29□□□□□ -0.76
NANOG-201ENST00000229307 OS9Q13438 667 aaPredicted RBP10.29□□□□□ -0.76
NANOG-201ENST00000229307 C1orf141Q5JVX7 400 aa10.29□□□□□ -0.76
NANOG-201ENST00000229307 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.29□□□□□ -0.76
NANOG-201ENST00000229307 CCER2I3L3R5 266 aa10.29□□□□□ -0.76
NANOG-201ENST00000229307 CASC1Q6TDU7 716 aa10.29□□□□□ -0.76
NANOG-201ENST00000229307 USP47Q96K76 1375 aa10.28□□□□□ -0.76
NANOG-201ENST00000229307 ANKRD30BQ9BXX2 1392 aa10.28□□□□□ -0.76
NANOG-201ENST00000229307 IPO8O15397 1037 aaKnown RBP10.28□□□□□ -0.76
NANOG-201ENST00000229307 STK31Q9BXU1 1019 aa10.27□□□□□ -0.77
NANOG-201ENST00000229307 CEBPAP49715 358 aaPredicted RBP10.26□□□□□ -0.77
NANOG-201ENST00000229307 MYO5CQ9NQX4 1742 aa10.26□□□□□ -0.77
NANOG-201ENST00000229307 HSPA2P54652 639 aa10.26□□□□□ -0.77
NANOG-201ENST00000229307 ESCO1Q5FWF5 840 aa10.26□□□□□ -0.77
NANOG-201ENST00000229307 PHF23Q9BUL5 403 aaPredicted RBP10.26□□□□□ -0.77
NANOG-201ENST00000229307 NLRP13Q86W25 1043 aa10.25□□□□□ -0.77
NANOG-201ENST00000229307 FRAT1Q92837 279 aaPredicted RBP10.25□□□□□ -0.77
NANOG-201ENST00000229307 ZNF330Q9Y3S2 320 aaPredicted RBP10.25□□□□□ -0.77
NANOG-201ENST00000229307 A2MP01023 1474 aa10.25□□□□□ -0.77
NANOG-201ENST00000229307 PANK3Q9H999 370 aa10.24□□□□□ -0.77
NANOG-201ENST00000229307 ERBINQ96RT1 1412 aa10.24□□□□□ -0.77
NANOG-201ENST00000229307 DHX29Q7Z478 1369 aaKnown RBP10.24□□□□□ -0.77
NANOG-201ENST00000229307 PTPRMP28827 1452 aa10.24□□□□□ -0.77
NANOG-201ENST00000229307 GPATCH8Q9UKJ3 1502 aaKnown RBP10.23□□□□□ -0.77
NANOG-201ENST00000229307 MLH3Q9UHC1 1453 aa10.23□□□□□ -0.77
NANOG-201ENST00000229307 PTPN23Q9H3S7 1636 aa10.23□□□□□ -0.77
NANOG-201ENST00000229307 YEATS2Q9ULM3 1422 aa10.23□□□□□ -0.77
NANOG-201ENST00000229307 ITSN2Q9NZM3 1697 aa10.22□□□□□ -0.77
NANOG-201ENST00000229307 RTEL1-TNFRSF6BF6WH68 1400 aa10.22□□□□□ -0.77
NANOG-201ENST00000229307 ARHGEF40Q8TER5 1519 aa10.22□□□□□ -0.77
NANOG-201ENST00000229307 TMEM132EQ6IEE7 984 aa10.22□□□□□ -0.77
NANOG-201ENST00000229307 RAPGEF4Q8WZA2 1011 aa10.22□□□□□ -0.77
NANOG-201ENST00000229307 ZNF692Q9BU19 519 aaPredicted RBP10.22□□□□□ -0.77
NANOG-201ENST00000229307 TRAPPC8Q9Y2L5 1435 aa10.22□□□□□ -0.77
NANOG-201ENST00000229307 COL17A1Q9UMD9 1497 aaPredicted RBP10.21□□□□□ -0.77
NANOG-201ENST00000229307 TOM1O60784 492 aa10.21□□□□□ -0.77
NANOG-201ENST00000229307 HMGB2P26583 209 aaKnown RBP10.21□□□□□ -0.77
NANOG-201ENST00000229307 TTC5Q8N0Z6 440 aa10.21□□□□□ -0.77
NANOG-201ENST00000229307 TNRQ92752 1358 aa10.21□□□□□ -0.77
NANOG-201ENST00000229307 TEFQ10587 303 aa10.21□□□□□ -0.78
NANOG-201ENST00000229307 CFAP70Q5T0N1 1121 aa10.21□□□□□ -0.78
NANOG-201ENST00000229307 PRAM1Q96QH2 718 aa10.2□□□□□ -0.78
NANOG-201ENST00000229307 TTC37Q6PGP7 1564 aa10.2□□□□□ -0.78
NANOG-201ENST00000229307 HECW2Q9P2P5 1572 aa10.2□□□□□ -0.78
NANOG-201ENST00000229307 ZMYM3Q14202 1370 aa10.2□□□□□ -0.78
NANOG-201ENST00000229307 NLRP6P59044 892 aa10.2□□□□□ -0.78
NANOG-201ENST00000229307 MYBBP1AQ9BQG0 1328 aaKnown RBP10.2□□□□□ -0.78
NANOG-201ENST00000229307 ABCC5O15440 1437 aa10.2□□□□□ -0.78
NANOG-201ENST00000229307 SLC26A8Q96RN1 970 aa10.2□□□□□ -0.78
NANOG-201ENST00000229307 GTF2E1P29083 439 aaPredicted RBP10.2□□□□□ -0.78
NANOG-201ENST00000229307 DIAPH1O60610 1272 aaKnown RBP10.19□□□□□ -0.78
NANOG-201ENST00000229307 SYCP2Q9BX26 1530 aa10.19□□□□□ -0.78
NANOG-201ENST00000229307 ABTB2Q8N961 1025 aa10.19□□□□□ -0.78
NANOG-201ENST00000229307 FBXO41Q8TF61 875 aa10.19□□□□□ -0.78
NANOG-201ENST00000229307 SMG6Q86US8 1419 aaKnown RBP10.19□□□□□ -0.78
NANOG-201ENST00000229307 FAM135AQ9P2D6 1515 aa10.19□□□□□ -0.78
NANOG-201ENST00000229307 SF3B2Q13435 895 aaKnown RBP10.18□□□□□ -0.78
NANOG-201ENST00000229307 CABP2Q9NPB3 220 aa10.18□□□□□ -0.78
NANOG-201ENST00000229307 UBAP1LF5GYI3 381 aa10.18□□□□□ -0.78
NANOG-201ENST00000229307 PIP4K2BP78356 416 aa10.18□□□□□ -0.78
NANOG-201ENST00000229307 CFAP44Q96MT7 982 aa10.18□□□□□ -0.78
NANOG-201ENST00000229307 NLRP2Q9NX02 1062 aa10.17□□□□□ -0.78
NANOG-201ENST00000229307 ATP7AQ04656 1500 aa10.17□□□□□ -0.78
NANOG-201ENST00000229307 G3V3G9 751 aa10.17□□□□□ -0.78
NANOG-201ENST00000229307 DCAF8Q5TAQ9 597 aa10.17□□□□□ -0.78
NANOG-201ENST00000229307 DCAF8L1A6NGE4 600 aa10.17□□□□□ -0.78
NANOG-201ENST00000229307 MSH5O43196 834 aa10.17□□□□□ -0.78
NANOG-201ENST00000229307 TAF7LQ5H9L4 462 aa10.17□□□□□ -0.78
NANOG-201ENST00000229307 CERKQ8TCT0 537 aa10.17□□□□□ -0.78
NANOG-201ENST00000229307 ZMYM4Q5VZL5 1548 aa10.16□□□□□ -0.78
NANOG-201ENST00000229307 NGEFQ8N5V2 710 aa10.16□□□□□ -0.78
NANOG-201ENST00000229307 LRPPRCP42704 1394 aaKnown RBP10.16□□□□□ -0.78
NANOG-201ENST00000229307 DUOX2Q9NRD8 1548 aa10.16□□□□□ -0.78
NANOG-201ENST00000229307 ATAD2Q6PL18 1390 aa10.16□□□□□ -0.78
NANOG-201ENST00000229307 CDK19Q9BWU1 502 aa10.15□□□□□ -0.78
NANOG-201ENST00000229307 ABCC1P33527 1531 aa10.15□□□□□ -0.78
NANOG-201ENST00000229307 WASHC2AQ641Q2 1341 aa10.15□□□□□ -0.78
NANOG-201ENST00000229307 SENP3-EIF4A1A0A087X0R7 540 aa10.15□□□□□ -0.79
NANOG-201ENST00000229307 SYTL4Q96C24 671 aaPredicted RBP10.14□□□□□ -0.79
NANOG-201ENST00000229307 PDE3BQ13370 1112 aa10.14□□□□□ -0.79
NANOG-201ENST00000229307 PREX2Q70Z35 1606 aa10.14□□□□□ -0.79
NANOG-201ENST00000229307 NUTM2BA6NNL0 878 aaPredicted RBP10.14□□□□□ -0.79
NANOG-201ENST00000229307 NUTM2EB1AL46 878 aaPredicted RBP10.14□□□□□ -0.79
NANOG-201ENST00000229307 NCOA1Q15788 1441 aa10.14□□□□□ -0.79
NANOG-201ENST00000229307 NUTM2AQ8IVF1 878 aaPredicted RBP10.14□□□□□ -0.79
NANOG-201ENST00000229307 ANP32EQ9BTT0 268 aa10.14□□□□□ -0.79
NANOG-201ENST00000229307 NPATQ14207 1427 aa10.13□□□□□ -0.79
NANOG-201ENST00000229307 PMFBP1Q8TBY8 1022 aa10.13□□□□□ -0.79
NANOG-201ENST00000229307 NAIPQ13075 1403 aa10.13□□□□□ -0.79
NANOG-201ENST00000229307 HMMRO75330 724 aa10.12□□□□□ -0.79
NANOG-201ENST00000229307 FBXO31Q5XUX0 539 aaPredicted RBP10.12□□□□□ -0.79
NANOG-201ENST00000229307 NUTM2GQ5VZR2 741 aa10.12□□□□□ -0.79
NANOG-201ENST00000229307 LMTK3Q96Q04 1460 aa10.12□□□□□ -0.79
NANOG-201ENST00000229307 RIMS1Q86UR5 1692 aaKnown RBP10.11□□□□□ -0.79
NANOG-201ENST00000229307 PLEKHO1Q53GL0 409 aaPredicted RBP10.11□□□□□ -0.79
NANOG-201ENST00000229307 SMC4Q9NTJ3 1288 aa10.11□□□□□ -0.79
NANOG-201ENST00000229307 CHMP3Q9Y3E7 222 aa10.11□□□□□ -0.79
NANOG-201ENST00000229307 AGLP35573 1532 aa10.11□□□□□ -0.79
NANOG-201ENST00000229307 NCKAP5LQ9HCH0 1330 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms