RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 TSR2Q969E8 191 aaKnown RBP18.18■□□□□ 0.5
PRDM4-201ENST00000228437 DISP3Q9P2K9 1392 aa18.17■□□□□ 0.5
PRDM4-201ENST00000228437 DZIP1LQ8IYY4 767 aaKnown RBP18.17■□□□□ 0.5
PRDM4-201ENST00000228437 PRG4Q92954 1404 aaPredicted RBP18.17■□□□□ 0.5
PRDM4-201ENST00000228437 PRDM10Q9NQV6 1147 aa18.17■□□□□ 0.5
PRDM4-201ENST00000228437 PDE3AQ14432 1141 aa18.17■□□□□ 0.5
PRDM4-201ENST00000228437 DMRT2Q9Y5R5 561 aa18.17■□□□□ 0.5
PRDM4-201ENST00000228437 GAPVD1Q14C86 1478 aa18.17■□□□□ 0.5
PRDM4-201ENST00000228437 PER1O15534 1290 aaPredicted RBP18.16■□□□□ 0.5
PRDM4-201ENST00000228437 KDM6BO15054 1643 aa18.16■□□□□ 0.5
PRDM4-201ENST00000228437 CAVIN1Q6NZI2 390 aaKnown RBP18.16■□□□□ 0.5
PRDM4-201ENST00000228437 PODXL2Q9NZ53 605 aa18.15■□□□□ 0.5
PRDM4-201ENST00000228437 TBC1D32Q96NH3 1257 aa18.15■□□□□ 0.5
PRDM4-201ENST00000228437 POLA1P09884 1462 aaPredicted RBP18.15■□□□□ 0.5
PRDM4-201ENST00000228437 TEX14Q8IWB6 1497 aa18.14■□□□□ 0.49
PRDM4-201ENST00000228437 NUTM2DQ5VT03 806 aaPredicted RBP18.14■□□□□ 0.49
PRDM4-201ENST00000228437 TRAK1Q9UPV9 953 aa18.14■□□□□ 0.49
PRDM4-201ENST00000228437 BCL11BQ9C0K0 894 aaPredicted RBP18.13■□□□□ 0.49
PRDM4-201ENST00000228437 C1orf115Q9H7X2 142 aa18.13■□□□□ 0.49
PRDM4-201ENST00000228437 CFAP43Q8NDM7 1665 aa18.13■□□□□ 0.49
PRDM4-201ENST00000228437 EPRSP07814 1512 aaKnown RBP18.13■□□□□ 0.49
PRDM4-201ENST00000228437 PARD3Q8TEW0 1356 aa18.12■□□□□ 0.49
PRDM4-201ENST00000228437 WWC1Q8IX03 1113 aa18.12■□□□□ 0.49
PRDM4-201ENST00000228437 TNPO1Q92973 898 aaKnown RBP18.12■□□□□ 0.49
PRDM4-201ENST00000228437 RLBP1P12271 317 aa18.11■□□□□ 0.49
PRDM4-201ENST00000228437 KDM5BQ9UGL1 1544 aa18.11■□□□□ 0.49
PRDM4-201ENST00000228437 XPCQ01831 940 aaPredicted RBP18.11■□□□□ 0.49
PRDM4-201ENST00000228437 SKOR2Q2VWA4 1001 aaPredicted RBP18.09■□□□□ 0.49
PRDM4-201ENST00000228437 TPM2P07951 284 aa18.09■□□□□ 0.49
PRDM4-201ENST00000228437 ERBINQ96RT1 1412 aa18.09■□□□□ 0.49
PRDM4-201ENST00000228437 SNAPC4Q5SXM2 1469 aa18.08■□□□□ 0.49
PRDM4-201ENST00000228437 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.08■□□□□ 0.48
PRDM4-201ENST00000228437 EIF3AQ14152 1382 aaKnown RBP18.07■□□□□ 0.48
PRDM4-201ENST00000228437 RARSP54136 660 aaKnown RBP18.07■□□□□ 0.48
PRDM4-201ENST00000228437 EXOSC9Q06265 439 aaKnown RBP18.07■□□□□ 0.48
PRDM4-201ENST00000228437 SSFA2P28290 1259 aa18.07■□□□□ 0.48
PRDM4-201ENST00000228437 PRDM2Q13029 1718 aa18.07■□□□□ 0.48
PRDM4-201ENST00000228437 ROCK1Q13464 1354 aa18.07■□□□□ 0.48
PRDM4-201ENST00000228437 DENND4BO75064 1496 aaPredicted RBP18.07■□□□□ 0.48
PRDM4-201ENST00000228437 MTHFSP49914 203 aa18.06■□□□□ 0.48
PRDM4-201ENST00000228437 RUNDC1Q96C34 613 aa18.06■□□□□ 0.48
PRDM4-201ENST00000228437 CC2D2AQ9P2K1 1620 aa18.06■□□□□ 0.48
PRDM4-201ENST00000228437 PRPF40AO75400 957 aaKnown RBP18.06■□□□□ 0.48
PRDM4-201ENST00000228437 STK26Q9P289 416 aa18.06■□□□□ 0.48
PRDM4-201ENST00000228437 ZHX1Q9UKY1 873 aaPredicted RBP18.06■□□□□ 0.48
PRDM4-201ENST00000228437 UGGT2Q9NYU1 1516 aa18.05■□□□□ 0.48
PRDM4-201ENST00000228437 UQCRHLA0A096LP55 91 aa18.05■□□□□ 0.48
PRDM4-201ENST00000228437 UQCRHP07919 91 aa18.05■□□□□ 0.48
PRDM4-201ENST00000228437 RBM42Q9BTD8 480 aaKnown RBP18.05■□□□□ 0.48
PRDM4-201ENST00000228437 IPO8O15397 1037 aaKnown RBP18.04■□□□□ 0.48
PRDM4-201ENST00000228437 CFAP70Q5T0N1 1121 aa18.04■□□□□ 0.48
PRDM4-201ENST00000228437 GRIN2BQ13224 1484 aa18.04■□□□□ 0.48
PRDM4-201ENST00000228437 DDX19BQ9UMR2 479 aa18.03■□□□□ 0.48
PRDM4-201ENST00000228437 NKTRP30414 1462 aaKnown RBP18.03■□□□□ 0.48
PRDM4-201ENST00000228437 CCDC173Q0VFZ6 552 aa18.03■□□□□ 0.48
PRDM4-201ENST00000228437 ZSCAN30Q86W11 494 aa18.03■□□□□ 0.48
PRDM4-201ENST00000228437 MVPQ14764 893 aaKnown RBP18.03■□□□□ 0.48
PRDM4-201ENST00000228437 TESK2Q96S53 571 aa18.03■□□□□ 0.48
PRDM4-201ENST00000228437 TOPBP1Q92547 1522 aa18.02■□□□□ 0.48
PRDM4-201ENST00000228437 SLC12A5Q9H2X9 1139 aa18.02■□□□□ 0.48
PRDM4-201ENST00000228437 USP19O94966 1318 aa18.02■□□□□ 0.47
PRDM4-201ENST00000228437 THOC2Q8NI27 1593 aaKnown RBP18.01■□□□□ 0.47
PRDM4-201ENST00000228437 SRPK2P78362 688 aaKnown RBP18.01■□□□□ 0.47
PRDM4-201ENST00000228437 PDCL3Q9H2J4 239 aa18.01■□□□□ 0.47
PRDM4-201ENST00000228437 NOB1Q9ULX3 412 aaKnown RBP18.01■□□□□ 0.47
PRDM4-201ENST00000228437 KIAA2012Q0VF49 1180 aa18.01■□□□□ 0.47
PRDM4-201ENST00000228437 CASC1Q6TDU7 716 aa18.01■□□□□ 0.47
PRDM4-201ENST00000228437 GAS2L3Q86XJ1 694 aa18.01■□□□□ 0.47
PRDM4-201ENST00000228437 JPH4Q96JJ6 628 aa18■□□□□ 0.47
PRDM4-201ENST00000228437 PTMSP20962 102 aa17.99■□□□□ 0.47
PRDM4-201ENST00000228437 MAGI3Q5TCQ9 1506 aa17.98■□□□□ 0.47
PRDM4-201ENST00000228437 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
PRDM4-201ENST00000228437 C9orf84Q5VXU9 1444 aa17.97■□□□□ 0.47
PRDM4-201ENST00000228437 PZPP20742 1482 aa17.97■□□□□ 0.47
PRDM4-201ENST00000228437 TMEM57Q8N5G2 664 aa17.97■□□□□ 0.47
PRDM4-201ENST00000228437 RBM27Q9P2N5 1060 aaKnown RBP17.97■□□□□ 0.47
PRDM4-201ENST00000228437 ANTXR1Q9H6X2 564 aa17.97■□□□□ 0.47
PRDM4-201ENST00000228437 K7ELQ4 463 aaPredicted RBP17.96■□□□□ 0.47
PRDM4-201ENST00000228437 RIPK4P57078 832 aa17.96■□□□□ 0.47
PRDM4-201ENST00000228437 TMEM132EQ6IEE7 984 aa17.96■□□□□ 0.47
PRDM4-201ENST00000228437 RALGAPBQ86X10 1494 aa17.96■□□□□ 0.47
PRDM4-201ENST00000228437 ABCA10Q8WWZ4 1543 aa17.95■□□□□ 0.46
PRDM4-201ENST00000228437 PLPPR3Q6T4P5 718 aa17.95■□□□□ 0.46
PRDM4-201ENST00000228437 HECW1Q76N89 1606 aa17.95■□□□□ 0.46
PRDM4-201ENST00000228437 KIF3BO15066 747 aa17.94■□□□□ 0.46
PRDM4-201ENST00000228437 BCORL1Q5H9F3 1711 aa17.94■□□□□ 0.46
PRDM4-201ENST00000228437 SSH1Q8WYL5 1049 aa17.94■□□□□ 0.46
PRDM4-201ENST00000228437 SYCE3A1L190 88 aa17.93■□□□□ 0.46
PRDM4-201ENST00000228437 GGNBP2Q9H3C7 697 aa17.93■□□□□ 0.46
PRDM4-201ENST00000228437 CAMSAP2Q08AD1 1489 aa17.93■□□□□ 0.46
PRDM4-201ENST00000228437 SOX12O15370 315 aa17.92■□□□□ 0.46
PRDM4-201ENST00000228437 ST18O60284 1047 aa17.92■□□□□ 0.46
PRDM4-201ENST00000228437 TRIM27P14373 513 aa17.92■□□□□ 0.46
PRDM4-201ENST00000228437 HMGXB3Q12766 1538 aa17.91■□□□□ 0.46
PRDM4-201ENST00000228437 FAM177BA6PVY3 158 aa17.91■□□□□ 0.46
PRDM4-201ENST00000228437 PLEKHG5O94827 1062 aa17.91■□□□□ 0.46
PRDM4-201ENST00000228437 ATF7IPQ6VMQ6 1270 aa17.91■□□□□ 0.46
PRDM4-201ENST00000228437 FSD2A1L4K1 749 aa17.91■□□□□ 0.46
PRDM4-201ENST00000228437 CHAF1AQ13111 956 aaPredicted RBP17.91■□□□□ 0.46
PRDM4-201ENST00000228437 CHD1LQ86WJ1 897 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms