RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 RIMS2Q9UQ26 1411 aa21.82■■□□□ 1.08
RPA3-201ENST00000223129 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
RPA3-201ENST00000223129 ZFYVE9O95405 1425 aa21.8■■□□□ 1.08
RPA3-201ENST00000223129 STRCQ7RTU9 1775 aa21.8■■□□□ 1.08
RPA3-201ENST00000223129 EID1Q9Y6B2 187 aa21.8■■□□□ 1.08
RPA3-201ENST00000223129 NEXMIFQ5QGS0 1516 aa21.77■■□□□ 1.08
RPA3-201ENST00000223129 SCAF11Q99590 1463 aaKnown RBP21.77■■□□□ 1.08
RPA3-201ENST00000223129 HDGFP51858 240 aaKnown RBP21.77■■□□□ 1.07
RPA3-201ENST00000223129 NEURL4Q96JN8 1562 aa21.76■■□□□ 1.07
RPA3-201ENST00000223129 PPP1R15AO75807 674 aaPredicted RBP21.76■■□□□ 1.07
RPA3-201ENST00000223129 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.76■■□□□ 1.07
RPA3-201ENST00000223129 RPGRIP1LQ68CZ1 1315 aa21.76■■□□□ 1.07
RPA3-201ENST00000223129 POLR1AO95602 1720 aaPredicted RBP21.76■■□□□ 1.07
RPA3-201ENST00000223129 CLSPNQ9HAW4 1339 aa21.74■■□□□ 1.07
RPA3-201ENST00000223129 PPLO60437 1756 aa21.73■■□□□ 1.07
RPA3-201ENST00000223129 DCAF11Q8TEB1 546 aa21.73■■□□□ 1.07
RPA3-201ENST00000223129 KDM2AQ9Y2K7 1162 aa21.73■■□□□ 1.07
RPA3-201ENST00000223129 BCANQ96GW7 911 aa21.72■■□□□ 1.07
RPA3-201ENST00000223129 NPHP4O75161 1426 aaPredicted RBP21.71■■□□□ 1.07
RPA3-201ENST00000223129 IFT172Q9UG01 1749 aa21.71■■□□□ 1.07
RPA3-201ENST00000223129 VGFO15240 615 aaPredicted RBP21.71■■□□□ 1.07
RPA3-201ENST00000223129 MED14O60244 1454 aa21.7■■□□□ 1.07
RPA3-201ENST00000223129 L3MBTL2Q969R5 705 aa21.7■■□□□ 1.06
RPA3-201ENST00000223129 ADGRF5Q8IZF2 1346 aa21.7■■□□□ 1.06
RPA3-201ENST00000223129 PLEKHG1Q9ULL1 1385 aa21.68■■□□□ 1.06
RPA3-201ENST00000223129 IQGAP1P46940 1657 aa21.67■■□□□ 1.06
RPA3-201ENST00000223129 SLC26A8Q96RN1 970 aa21.67■■□□□ 1.06
RPA3-201ENST00000223129 DMRT2Q9Y5R5 561 aa21.67■■□□□ 1.06
RPA3-201ENST00000223129 TONSLQ96HA7 1378 aa21.66■■□□□ 1.06
RPA3-201ENST00000223129 MYOM2P54296 1465 aa21.63■■□□□ 1.05
RPA3-201ENST00000223129 NRXN3Q9Y4C0 1643 aa21.62■■□□□ 1.05
RPA3-201ENST00000223129 ADAMTS13Q76LX8 1427 aa21.62■■□□□ 1.05
RPA3-201ENST00000223129 SETBP1Q9Y6X0 1596 aa21.6■■□□□ 1.05
RPA3-201ENST00000223129 STAC3Q96MF2 364 aa21.6■■□□□ 1.05
RPA3-201ENST00000223129 NRXN1Q9ULB1 1477 aa21.6■■□□□ 1.05
RPA3-201ENST00000223129 PIK3C2GO75747 1445 aa21.59■■□□□ 1.05
RPA3-201ENST00000223129 TBX22Q9Y458 520 aa21.58■■□□□ 1.05
RPA3-201ENST00000223129 CFAP70Q5T0N1 1121 aa21.57■■□□□ 1.04
RPA3-201ENST00000223129 ALKQ9UM73 1620 aa21.56■■□□□ 1.04
RPA3-201ENST00000223129 C14orf93Q9H972 538 aaKnown RBP21.55■■□□□ 1.04
RPA3-201ENST00000223129 ZNF335Q9H4Z2 1342 aaPredicted RBP21.54■■□□□ 1.04
RPA3-201ENST00000223129 METP08581 1390 aa21.54■■□□□ 1.04
RPA3-201ENST00000223129 PRAG1Q86YV5 1406 aa21.54■■□□□ 1.04
RPA3-201ENST00000223129 NBPF8Q3BBV2 869 aa21.53■■□□□ 1.04
RPA3-201ENST00000223129 TIMELESSQ9UNS1 1208 aa21.53■■□□□ 1.04
RPA3-201ENST00000223129 TMEM132EQ6IEE7 984 aa21.53■■□□□ 1.04
RPA3-201ENST00000223129 DIP2AQ14689 1571 aa21.52■■□□□ 1.04
RPA3-201ENST00000223129 SETD1AO15047 1707 aaKnown RBP21.52■■□□□ 1.04
RPA3-201ENST00000223129 PTPRUQ92729 1446 aa21.49■■□□□ 1.03
RPA3-201ENST00000223129 NBPF1Q3BBV0 1214 aa21.48■■□□□ 1.03
RPA3-201ENST00000223129 STRCP1A6NGW2 1772 aa21.48■■□□□ 1.03
RPA3-201ENST00000223129 KCNA6P17658 529 aa21.48■■□□□ 1.03
RPA3-201ENST00000223129 AMOTL2Q9Y2J4 779 aa21.48■■□□□ 1.03
RPA3-201ENST00000223129 CHD2O14647 1828 aaKnown RBP21.47■■□□□ 1.03
RPA3-201ENST00000223129 ASXL1Q8IXJ9 1541 aa21.47■■□□□ 1.03
RPA3-201ENST00000223129 LAMC1P11047 1609 aa21.47■■□□□ 1.03
RPA3-201ENST00000223129 PIK3R4Q99570 1358 aa21.46■■□□□ 1.03
RPA3-201ENST00000223129 STK26Q9P289 416 aa21.46■■□□□ 1.03
RPA3-201ENST00000223129 KIAA1210Q9ULL0 1709 aa21.43■■□□□ 1.02
RPA3-201ENST00000223129 TRPM1Q7Z4N2 1603 aa21.43■■□□□ 1.02
RPA3-201ENST00000223129 ADGRB1O14514 1584 aa21.43■■□□□ 1.02
RPA3-201ENST00000223129 LTBP4Q8N2S1 1624 aa21.42■■□□□ 1.02
RPA3-201ENST00000223129 RBM33Q96EV2 1170 aaKnown RBP21.42■■□□□ 1.02
RPA3-201ENST00000223129 YTHDC2Q9H6S0 1430 aaKnown RBP21.41■■□□□ 1.02
RPA3-201ENST00000223129 NWD1Q149M9 1564 aa21.41■■□□□ 1.02
RPA3-201ENST00000223129 LRPPRCP42704 1394 aaKnown RBP21.4■■□□□ 1.02
RPA3-201ENST00000223129 XRN1Q8IZH2 1706 aaKnown RBP21.39■■□□□ 1.02
RPA3-201ENST00000223129 ROCK2O75116 1388 aaKnown RBP21.39■■□□□ 1.02
RPA3-201ENST00000223129 PROSER2Q86WR7 435 aaPredicted RBP21.39■■□□□ 1.01
RPA3-201ENST00000223129 TRAK1Q9UPV9 953 aa21.39■■□□□ 1.01
RPA3-201ENST00000223129 ABCC11Q96J66 1382 aa21.37■■□□□ 1.01
RPA3-201ENST00000223129 ROBO2Q9HCK4 1378 aa21.37■■□□□ 1.01
RPA3-201ENST00000223129 RALGAPBQ86X10 1494 aa21.36■■□□□ 1.01
RPA3-201ENST00000223129 CPS1P31327 1500 aa21.36■■□□□ 1.01
RPA3-201ENST00000223129 LRRC7Q96NW7 1537 aa21.36■■□□□ 1.01
RPA3-201ENST00000223129 NKTRP30414 1462 aaKnown RBP21.35■■□□□ 1.01
RPA3-201ENST00000223129 WAPLQ7Z5K2 1190 aa21.35■■□□□ 1.01
RPA3-201ENST00000223129 CARD11Q9BXL7 1154 aa21.34■■□□□ 1.01
RPA3-201ENST00000223129 TMEM94Q12767 1356 aa21.33■■□□□ 1.01
RPA3-201ENST00000223129 TECPR2O15040 1411 aa21.33■■□□□ 1
RPA3-201ENST00000223129 KNDC1Q76NI1 1749 aa21.32■■□□□ 1
RPA3-201ENST00000223129 GPRASP1Q5JY77 1395 aa21.32■■□□□ 1
RPA3-201ENST00000223129 PLEKHH1Q9ULM0 1364 aa21.32■■□□□ 1
RPA3-201ENST00000223129 PTCH1Q13635 1447 aa21.32■■□□□ 1
RPA3-201ENST00000223129 PRAM1Q96QH2 718 aa21.31■■□□□ 1
RPA3-201ENST00000223129 SAFB2Q14151 953 aaKnown RBP eCLIP21.31■■□□□ 1
RPA3-201ENST00000223129 XIRP1Q702N8 1843 aaKnown RBP21.3■■□□□ 1
RPA3-201ENST00000223129 CERKQ8TCT0 537 aa21.29■■□□□ 1
RPA3-201ENST00000223129 SIRT1Q96EB6 747 aa21.29■■□□□ 1
RPA3-201ENST00000223129 POGKQ9P215 609 aa21.29■■□□□ 1
RPA3-201ENST00000223129 C14orf37Q86TY3 774 aa21.28■■□□□ 1
RPA3-201ENST00000223129 DLC1Q96QB1 1528 aa21.28■■□□□ 1
RPA3-201ENST00000223129 ARHGEF28Q8N1W1 1705 aaKnown RBP21.27■■□□□ 1
RPA3-201ENST00000223129 FAM135BQ49AJ0 1406 aa21.27■■□□□ 1
RPA3-201ENST00000223129 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.24■□□□□ 0.99
RPA3-201ENST00000223129 NCOA3Q9Y6Q9 1424 aa21.22■□□□□ 0.99
RPA3-201ENST00000223129 C19orf44Q9H6X5 657 aa21.22■□□□□ 0.99
RPA3-201ENST00000223129 MINK1Q8N4C8 1332 aaPredicted RBP21.22■□□□□ 0.99
RPA3-201ENST00000223129 NALCNQ8IZF0 1738 aa21.22■□□□□ 0.99
RPA3-201ENST00000223129 HIRIP3Q9BW71 556 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms