RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 ZNF326Q5BKZ1 582 aaKnown RBP28.29■■■□□ 2.12
SNAPC2-201ENST00000221573 ZFYVE9O95405 1425 aa28.28■■■□□ 2.12
SNAPC2-201ENST00000221573 RIMS2Q9UQ26 1411 aa28.27■■■□□ 2.12
SNAPC2-201ENST00000221573 STRCQ7RTU9 1775 aa28.25■■■□□ 2.11
SNAPC2-201ENST00000221573 NUTM2DQ5VT03 806 aaPredicted RBP28.23■■■□□ 2.11
SNAPC2-201ENST00000221573 LTKP29376 864 aa28.21■■■□□ 2.11
SNAPC2-201ENST00000221573 SCAF11Q99590 1463 aaKnown RBP28.21■■■□□ 2.11
SNAPC2-201ENST00000221573 TXNDC2Q86VQ3 553 aa28.18■■■□□ 2.1
SNAPC2-201ENST00000221573 RPGRIP1LQ68CZ1 1315 aa28.18■■■□□ 2.1
SNAPC2-201ENST00000221573 ANKLE2Q86XL3 938 aa28.18■■■□□ 2.1
SNAPC2-201ENST00000221573 NCKAP5LQ9HCH0 1330 aa28.17■■■□□ 2.1
SNAPC2-201ENST00000221573 EID1Q9Y6B2 187 aa28.17■■■□□ 2.1
SNAPC2-201ENST00000221573 TONSLQ96HA7 1378 aa28.15■■■□□ 2.1
SNAPC2-201ENST00000221573 PPP1R15AO75807 674 aaPredicted RBP28.14■■■□□ 2.1
SNAPC2-201ENST00000221573 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.14■■■□□ 2.1
SNAPC2-201ENST00000221573 IQGAP1P46940 1657 aa28.14■■■□□ 2.09
SNAPC2-201ENST00000221573 MYOM2P54296 1465 aa28.13■■■□□ 2.09
SNAPC2-201ENST00000221573 DCAF11Q8TEB1 546 aa28.13■■■□□ 2.09
SNAPC2-201ENST00000221573 L3MBTL2Q969R5 705 aa28.13■■■□□ 2.09
SNAPC2-201ENST00000221573 HDGFP51858 240 aaKnown RBP28.13■■■□□ 2.09
SNAPC2-201ENST00000221573 SENP3Q9H4L4 574 aaPredicted RBP28.13■■■□□ 2.09
SNAPC2-201ENST00000221573 MED14O60244 1454 aa28.12■■■□□ 2.09
SNAPC2-201ENST00000221573 NRXN3Q9Y4C0 1643 aa28.11■■■□□ 2.09
SNAPC2-201ENST00000221573 KDM2AQ9Y2K7 1162 aa28.11■■■□□ 2.09
SNAPC2-201ENST00000221573 ADGRF5Q8IZF2 1346 aa28.1■■■□□ 2.09
SNAPC2-201ENST00000221573 NPHP4O75161 1426 aaPredicted RBP28.1■■■□□ 2.09
SNAPC2-201ENST00000221573 PLEKHG1Q9ULL1 1385 aa28.1■■■□□ 2.09
SNAPC2-201ENST00000221573 VGFO15240 615 aaPredicted RBP28.09■■■□□ 2.09
SNAPC2-201ENST00000221573 NRXN1Q9ULB1 1477 aa28.08■■■□□ 2.09
SNAPC2-201ENST00000221573 SETBP1Q9Y6X0 1596 aa28.07■■■□□ 2.08
SNAPC2-201ENST00000221573 PIK3C2GO75747 1445 aa28.04■■■□□ 2.08
SNAPC2-201ENST00000221573 SETD1AO15047 1707 aaKnown RBP28.04■■■□□ 2.08
SNAPC2-201ENST00000221573 BCANQ96GW7 911 aa28.02■■■□□ 2.08
SNAPC2-201ENST00000221573 ADAMTS13Q76LX8 1427 aa28.01■■■□□ 2.08
SNAPC2-201ENST00000221573 PRAG1Q86YV5 1406 aa28■■■□□ 2.07
SNAPC2-201ENST00000221573 STAC3Q96MF2 364 aa28■■■□□ 2.07
SNAPC2-201ENST00000221573 ALKQ9UM73 1620 aa28■■■□□ 2.07
SNAPC2-201ENST00000221573 DIP2AQ14689 1571 aa27.99■■■□□ 2.07
SNAPC2-201ENST00000221573 SLC26A8Q96RN1 970 aa27.98■■■□□ 2.07
SNAPC2-201ENST00000221573 TIMELESSQ9UNS1 1208 aa27.98■■■□□ 2.07
SNAPC2-201ENST00000221573 LAMC1P11047 1609 aa27.98■■■□□ 2.07
SNAPC2-201ENST00000221573 TRPM1Q7Z4N2 1603 aa27.94■■■□□ 2.06
SNAPC2-201ENST00000221573 KIAA1210Q9ULL0 1709 aa27.94■■■□□ 2.06
SNAPC2-201ENST00000221573 ASXL1Q8IXJ9 1541 aa27.93■■■□□ 2.06
SNAPC2-201ENST00000221573 NBPF8Q3BBV2 869 aa27.92■■■□□ 2.06
SNAPC2-201ENST00000221573 DMRT2Q9Y5R5 561 aa27.92■■■□□ 2.06
SNAPC2-201ENST00000221573 CFAP70Q5T0N1 1121 aa27.92■■■□□ 2.06
SNAPC2-201ENST00000221573 TBX22Q9Y458 520 aa27.9■■■□□ 2.06
SNAPC2-201ENST00000221573 METP08581 1390 aa27.89■■■□□ 2.06
SNAPC2-201ENST00000221573 C14orf93Q9H972 538 aaKnown RBP27.89■■■□□ 2.06
SNAPC2-201ENST00000221573 CHD2O14647 1828 aaKnown RBP27.89■■■□□ 2.06
SNAPC2-201ENST00000221573 STRCP1A6NGW2 1772 aa27.87■■■□□ 2.05
SNAPC2-201ENST00000221573 ADGRB1O14514 1584 aa27.86■■■□□ 2.05
SNAPC2-201ENST00000221573 PTPRUQ92729 1446 aa27.84■■■□□ 2.05
SNAPC2-201ENST00000221573 TMEM132EQ6IEE7 984 aa27.83■■■□□ 2.05
SNAPC2-201ENST00000221573 XRN1Q8IZH2 1706 aaKnown RBP27.83■■■□□ 2.05
SNAPC2-201ENST00000221573 RALGAPBQ86X10 1494 aa27.82■■■□□ 2.04
SNAPC2-201ENST00000221573 NWD1Q149M9 1564 aa27.82■■■□□ 2.04
SNAPC2-201ENST00000221573 NBPF1Q3BBV0 1214 aa27.82■■■□□ 2.04
SNAPC2-201ENST00000221573 PIK3R4Q99570 1358 aa27.81■■■□□ 2.04
SNAPC2-201ENST00000221573 ZNF335Q9H4Z2 1342 aaPredicted RBP27.8■■■□□ 2.04
SNAPC2-201ENST00000221573 KNDC1Q76NI1 1749 aa27.78■■■□□ 2.04
SNAPC2-201ENST00000221573 ROCK2O75116 1388 aaKnown RBP27.77■■■□□ 2.04
SNAPC2-201ENST00000221573 YTHDC2Q9H6S0 1430 aaKnown RBP27.77■■■□□ 2.04
SNAPC2-201ENST00000221573 AMOTL2Q9Y2J4 779 aa27.75■■■□□ 2.03
SNAPC2-201ENST00000221573 KCNA6P17658 529 aa27.74■■■□□ 2.03
SNAPC2-201ENST00000221573 LRPPRCP42704 1394 aaKnown RBP27.74■■■□□ 2.03
SNAPC2-201ENST00000221573 STK26Q9P289 416 aa27.73■■■□□ 2.03
SNAPC2-201ENST00000221573 GPRASP1Q5JY77 1395 aa27.72■■■□□ 2.03
SNAPC2-201ENST00000221573 CPS1P31327 1500 aa27.72■■■□□ 2.03
SNAPC2-201ENST00000221573 ARHGEF28Q8N1W1 1705 aaKnown RBP27.72■■■□□ 2.03
SNAPC2-201ENST00000221573 LTBP4Q8N2S1 1624 aa27.72■■■□□ 2.03
SNAPC2-201ENST00000221573 NKTRP30414 1462 aaKnown RBP27.71■■■□□ 2.03
SNAPC2-201ENST00000221573 TECPR2O15040 1411 aa27.7■■■□□ 2.02
SNAPC2-201ENST00000221573 ABCC11Q96J66 1382 aa27.68■■■□□ 2.02
SNAPC2-201ENST00000221573 PTCH1Q13635 1447 aa27.68■■■□□ 2.02
SNAPC2-201ENST00000221573 ROBO2Q9HCK4 1378 aa27.68■■■□□ 2.02
SNAPC2-201ENST00000221573 TRAK1Q9UPV9 953 aa27.67■■■□□ 2.02
SNAPC2-201ENST00000221573 XIRP1Q702N8 1843 aaKnown RBP27.67■■■□□ 2.02
SNAPC2-201ENST00000221573 DLC1Q96QB1 1528 aa27.67■■■□□ 2.02
SNAPC2-201ENST00000221573 CARD11Q9BXL7 1154 aa27.67■■■□□ 2.02
SNAPC2-201ENST00000221573 ZEB1P37275 1124 aaPredicted RBP27.64■■■□□ 2.02
SNAPC2-201ENST00000221573 LRRC7Q96NW7 1537 aa27.63■■■□□ 2.01
SNAPC2-201ENST00000221573 RBM33Q96EV2 1170 aaKnown RBP27.62■■■□□ 2.01
SNAPC2-201ENST00000221573 PLEKHH1Q9ULM0 1364 aa27.61■■■□□ 2.01
SNAPC2-201ENST00000221573 PROSER2Q86WR7 435 aaPredicted RBP27.61■■■□□ 2.01
SNAPC2-201ENST00000221573 FAM135BQ49AJ0 1406 aa27.6■■■□□ 2.01
SNAPC2-201ENST00000221573 NALCNQ8IZF0 1738 aa27.59■■■□□ 2.01
SNAPC2-201ENST00000221573 WAPLQ7Z5K2 1190 aa27.59■■■□□ 2.01
SNAPC2-201ENST00000221573 PRAM1Q96QH2 718 aa27.58■■■□□ 2.01
SNAPC2-201ENST00000221573 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.58■■■□□ 2.01
SNAPC2-201ENST00000221573 TMEM94Q12767 1356 aa27.58■■■□□ 2.01
SNAPC2-201ENST00000221573 QRICH2Q9H0J4 1663 aa27.58■■■□□ 2
SNAPC2-201ENST00000221573 USP47Q96K76 1375 aa27.55■■■□□ 2
SNAPC2-201ENST00000221573 SAFB2Q14151 953 aaKnown RBP eCLIP27.55■■■□□ 2
SNAPC2-201ENST00000221573 SIRT1Q96EB6 747 aa27.55■■■□□ 2
SNAPC2-201ENST00000221573 EIF3AQ14152 1382 aaKnown RBP27.54■■■□□ 2
SNAPC2-201ENST00000221573 POGKQ9P215 609 aa27.53■■■□□ 2
SNAPC2-201ENST00000221573 CENPJQ9HC77 1338 aaPredicted RBP27.51■■□□□ 1.99
SNAPC2-201ENST00000221573 ADGRL3Q9HAR2 1447 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms