RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 PNISRQ8TF01 805 aaKnown RBP10.84□□□□□ -0.67
HMGXB4-201ENST00000216106 ADGRF5Q8IZF2 1346 aa10.84□□□□□ -0.67
HMGXB4-201ENST00000216106 WASHC2CQ9Y4E1 1318 aa10.84□□□□□ -0.67
HMGXB4-201ENST00000216106 SENP3-EIF4A1A0A087X0R7 540 aa10.84□□□□□ -0.67
HMGXB4-201ENST00000216106 CHGAP10645 457 aaKnown RBP10.84□□□□□ -0.67
HMGXB4-201ENST00000216106 PANK3Q9H999 370 aa10.84□□□□□ -0.67
HMGXB4-201ENST00000216106 ADGRB3O60242 1522 aa10.83□□□□□ -0.68
HMGXB4-201ENST00000216106 CAMSAP1Q5T5Y3 1602 aa10.83□□□□□ -0.68
HMGXB4-201ENST00000216106 CFAP70Q5T0N1 1121 aa10.83□□□□□ -0.68
HMGXB4-201ENST00000216106 BRD4O60885 1362 aaPredicted RBP10.83□□□□□ -0.68
HMGXB4-201ENST00000216106 PARD3Q8TEW0 1356 aa10.83□□□□□ -0.68
HMGXB4-201ENST00000216106 IRX6P78412 446 aaPredicted RBP10.83□□□□□ -0.68
HMGXB4-201ENST00000216106 CC2D1BQ5T0F9 858 aaKnown RBP10.82□□□□□ -0.68
HMGXB4-201ENST00000216106 SIGLEC1Q9BZZ2 1709 aa10.82□□□□□ -0.68
HMGXB4-201ENST00000216106 YEATS2Q9ULM3 1422 aa10.82□□□□□ -0.68
HMGXB4-201ENST00000216106 NOS1P29475 1434 aa10.81□□□□□ -0.68
HMGXB4-201ENST00000216106 EIF3AQ14152 1382 aaKnown RBP10.81□□□□□ -0.68
HMGXB4-201ENST00000216106 GLI2P10070 1586 aa10.81□□□□□ -0.68
HMGXB4-201ENST00000216106 TSPOAP1O95153 1857 aa10.81□□□□□ -0.68
HMGXB4-201ENST00000216106 NLRP13Q86W25 1043 aa10.8□□□□□ -0.68
HMGXB4-201ENST00000216106 PPLO60437 1756 aa10.8□□□□□ -0.68
HMGXB4-201ENST00000216106 DIP2BQ9P265 1576 aa10.8□□□□□ -0.68
HMGXB4-201ENST00000216106 FAM69CQ0P6D2 419 aa10.8□□□□□ -0.68
HMGXB4-201ENST00000216106 LRPPRCP42704 1394 aaKnown RBP10.79□□□□□ -0.68
HMGXB4-201ENST00000216106 NRXN1Q9ULB1 1477 aa10.79□□□□□ -0.68
HMGXB4-201ENST00000216106 MYOM1P52179 1685 aa10.79□□□□□ -0.68
HMGXB4-201ENST00000216106 SYNMO15061 1565 aa10.79□□□□□ -0.68
HMGXB4-201ENST00000216106 KDM5AP29375 1690 aaKnown RBP10.78□□□□□ -0.68
HMGXB4-201ENST00000216106 ZC3H13Q5T200 1668 aaKnown RBP10.77□□□□□ -0.68
HMGXB4-201ENST00000216106 CDCA8Q53HL2 280 aa10.77□□□□□ -0.68
HMGXB4-201ENST00000216106 PIK3C2BO00750 1634 aa10.77□□□□□ -0.69
HMGXB4-201ENST00000216106 PIK3C2GO75747 1445 aa10.76□□□□□ -0.69
HMGXB4-201ENST00000216106 SMG6Q86US8 1419 aaKnown RBP10.76□□□□□ -0.69
HMGXB4-201ENST00000216106 KNSTRNQ9Y448 316 aa10.75□□□□□ -0.69
HMGXB4-201ENST00000216106 ERVK-7P63135 1459 aa10.75□□□□□ -0.69
HMGXB4-201ENST00000216106 SETBP1Q9Y6X0 1596 aa10.75□□□□□ -0.69
HMGXB4-201ENST00000216106 ZMYM4Q5VZL5 1548 aa10.75□□□□□ -0.69
HMGXB4-201ENST00000216106 MYO3AQ8NEV4 1616 aa10.75□□□□□ -0.69
HMGXB4-201ENST00000216106 NUTM2DQ5VT03 806 aaPredicted RBP10.75□□□□□ -0.69
HMGXB4-201ENST00000216106 NUDCQ9Y266 331 aa10.74□□□□□ -0.69
HMGXB4-201ENST00000216106 ARHGAP31Q2M1Z3 1444 aa10.74□□□□□ -0.69
HMGXB4-201ENST00000216106 TRAK1Q9UPV9 953 aa10.74□□□□□ -0.69
HMGXB4-201ENST00000216106 TSHZ2Q9NRE2 1034 aa10.73□□□□□ -0.69
HMGXB4-201ENST00000216106 ADGRB1O14514 1584 aa10.73□□□□□ -0.69
HMGXB4-201ENST00000216106 AMER1Q5JTC6 1135 aaPredicted RBP10.73□□□□□ -0.69
HMGXB4-201ENST00000216106 TMEM132EQ6IEE7 984 aa10.73□□□□□ -0.69
HMGXB4-201ENST00000216106 SALL2Q9Y467 1007 aaPredicted RBP10.73□□□□□ -0.69
HMGXB4-201ENST00000216106 MYO5BQ9ULV0 1848 aa10.73□□□□□ -0.69
HMGXB4-201ENST00000216106 PREX1Q8TCU6 1659 aa10.73□□□□□ -0.69
HMGXB4-201ENST00000216106 NEXMIFQ5QGS0 1516 aa10.73□□□□□ -0.69
HMGXB4-201ENST00000216106 ASXL1Q8IXJ9 1541 aa10.73□□□□□ -0.69
HMGXB4-201ENST00000216106 RPGRIP1LQ68CZ1 1315 aa10.72□□□□□ -0.69
HMGXB4-201ENST00000216106 QRICH2Q9H0J4 1663 aa10.72□□□□□ -0.69
HMGXB4-201ENST00000216106 C14orf93Q9H972 538 aaKnown RBP10.72□□□□□ -0.69
HMGXB4-201ENST00000216106 CENPJQ9HC77 1338 aaPredicted RBP10.72□□□□□ -0.69
HMGXB4-201ENST00000216106 IDI1Q13907 227 aa10.72□□□□□ -0.69
HMGXB4-201ENST00000216106 SENP3Q9H4L4 574 aaPredicted RBP10.71□□□□□ -0.7
HMGXB4-201ENST00000216106 SBNO2Q9Y2G9 1366 aa10.7□□□□□ -0.7
HMGXB4-201ENST00000216106 SLC24A1O60721 1099 aa10.7□□□□□ -0.7
HMGXB4-201ENST00000216106 PPP2R1AP30153 589 aa10.7□□□□□ -0.7
HMGXB4-201ENST00000216106 VGFO15240 615 aaPredicted RBP10.69□□□□□ -0.7
HMGXB4-201ENST00000216106 BLMP54132 1417 aaPredicted RBP10.69□□□□□ -0.7
HMGXB4-201ENST00000216106 ERICH6BQ5W0A0 696 aa10.68□□□□□ -0.7
HMGXB4-201ENST00000216106 SLC52A1Q9NWF4 448 aa10.68□□□□□ -0.7
HMGXB4-201ENST00000216106 TMEM131LA2VDJ0 1609 aa10.68□□□□□ -0.7
HMGXB4-201ENST00000216106 FBXO31Q5XUX0 539 aaPredicted RBP10.68□□□□□ -0.7
HMGXB4-201ENST00000216106 ARHGEF28Q8N1W1 1705 aaKnown RBP10.68□□□□□ -0.7
HMGXB4-201ENST00000216106 KIF13AQ9H1H9 1805 aa10.68□□□□□ -0.7
HMGXB4-201ENST00000216106 PPP4R2Q9NY27 417 aa10.68□□□□□ -0.7
HMGXB4-201ENST00000216106 CARD14Q9BXL6 1004 aa10.67□□□□□ -0.7
HMGXB4-201ENST00000216106 CLTCQ00610 1675 aaKnown RBP10.67□□□□□ -0.7
HMGXB4-201ENST00000216106 NPC1L1Q9UHC9 1359 aa10.67□□□□□ -0.7
HMGXB4-201ENST00000216106 REREQ9P2R6 1566 aa10.67□□□□□ -0.7
HMGXB4-201ENST00000216106 ADAMTS8Q9UP79 889 aa10.66□□□□□ -0.7
HMGXB4-201ENST00000216106 B4GALNT3Q6L9W6 998 aa10.65□□□□□ -0.7
HMGXB4-201ENST00000216106 INSRP06213 1382 aa10.65□□□□□ -0.7
HMGXB4-201ENST00000216106 RNF123Q5XPI4 1314 aa10.65□□□□□ -0.7
HMGXB4-201ENST00000216106 MLECQ14165 292 aa10.65□□□□□ -0.7
HMGXB4-201ENST00000216106 WDR43Q15061 677 aaKnown RBP eCLIP10.65□□□□□ -0.71
HMGXB4-201ENST00000216106 AGLP35573 1532 aa10.65□□□□□ -0.71
HMGXB4-201ENST00000216106 CDCA7LQ96GN5 454 aa10.64□□□□□ -0.71
HMGXB4-201ENST00000216106 SAFB2Q14151 953 aaKnown RBP eCLIP10.64□□□□□ -0.71
HMGXB4-201ENST00000216106 SLC12A5Q9H2X9 1139 aa10.64□□□□□ -0.71
HMGXB4-201ENST00000216106 ZFYVE9O95405 1425 aa10.64□□□□□ -0.71
HMGXB4-201ENST00000216106 NSD3Q9BZ95 1437 aa10.63□□□□□ -0.71
HMGXB4-201ENST00000216106 TULP4Q9NRJ4 1543 aa10.63□□□□□ -0.71
HMGXB4-201ENST00000216106 STK26Q9P289 416 aa10.63□□□□□ -0.71
HMGXB4-201ENST00000216106 ARHGEF40Q8TER5 1519 aa10.63□□□□□ -0.71
HMGXB4-201ENST00000216106 PDE3BQ13370 1112 aa10.63□□□□□ -0.71
HMGXB4-201ENST00000216106 STAG3Q9UJ98 1225 aa10.62□□□□□ -0.71
HMGXB4-201ENST00000216106 EVC2Q86UK5 1308 aa10.61□□□□□ -0.71
HMGXB4-201ENST00000216106 RCAN3Q9UKA8 241 aa10.61□□□□□ -0.71
HMGXB4-201ENST00000216106 CABP2Q9NPB3 220 aa10.6□□□□□ -0.71
HMGXB4-201ENST00000216106 SPATA31D1Q6ZQQ2 1576 aa10.6□□□□□ -0.71
HMGXB4-201ENST00000216106 PPP6R1Q9UPN7 881 aa10.6□□□□□ -0.71
HMGXB4-201ENST00000216106 TNNT2P45379 298 aaPredicted RBP10.59□□□□□ -0.71
HMGXB4-201ENST00000216106 RRP1P56182 461 aaKnown RBP10.59□□□□□ -0.71
HMGXB4-201ENST00000216106 CCDC146Q8IYE0 955 aa10.59□□□□□ -0.71
HMGXB4-201ENST00000216106 PLEKHH1Q9ULM0 1364 aa10.59□□□□□ -0.71
HMGXB4-201ENST00000216106 PTPRMP28827 1452 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms