RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 GGT6Q6P531 493 aa24.45■■□□□ 1.5
SLC22A4-201ENST00000200652 ADGRF5Q8IZF2 1346 aa24.44■■□□□ 1.5
SLC22A4-201ENST00000200652 NPATQ14207 1427 aa24.44■■□□□ 1.5
SLC22A4-201ENST00000200652 RAPGEF3O95398 923 aa24.44■■□□□ 1.5
SLC22A4-201ENST00000200652 CC2D1BQ5T0F9 858 aaKnown RBP24.43■■□□□ 1.5
SLC22A4-201ENST00000200652 CFAP65Q6ZU64 1925 aaKnown RBP24.42■■□□□ 1.5
SLC22A4-201ENST00000200652 CFAP70Q5T0N1 1121 aa24.42■■□□□ 1.5
SLC22A4-201ENST00000200652 EIF3AQ14152 1382 aaKnown RBP24.42■■□□□ 1.5
SLC22A4-201ENST00000200652 ADGRB3O60242 1522 aa24.42■■□□□ 1.5
SLC22A4-201ENST00000200652 NUDCQ9Y266 331 aa24.41■■□□□ 1.5
SLC22A4-201ENST00000200652 CDCA8Q53HL2 280 aa24.41■■□□□ 1.5
SLC22A4-201ENST00000200652 NRXN1Q9ULB1 1477 aa24.41■■□□□ 1.5
SLC22A4-201ENST00000200652 ABCC3O15438 1527 aa24.4■■□□□ 1.5
SLC22A4-201ENST00000200652 RICTORQ6R327 1708 aa24.39■■□□□ 1.49
SLC22A4-201ENST00000200652 DIP2CQ9Y2E4 1556 aa24.39■■□□□ 1.49
SLC22A4-201ENST00000200652 SENP3-EIF4A1A0A087X0R7 540 aa24.38■■□□□ 1.49
SLC22A4-201ENST00000200652 SYNMO15061 1565 aa24.38■■□□□ 1.49
SLC22A4-201ENST00000200652 CAMSAP1Q5T5Y3 1602 aa24.36■■□□□ 1.49
SLC22A4-201ENST00000200652 NOS1P29475 1434 aa24.35■■□□□ 1.49
SLC22A4-201ENST00000200652 CHGAP10645 457 aaKnown RBP24.35■■□□□ 1.49
SLC22A4-201ENST00000200652 CYB5RLQ6IPT4 315 aa24.35■■□□□ 1.49
SLC22A4-201ENST00000200652 MYOM1P52179 1685 aa24.34■■□□□ 1.49
SLC22A4-201ENST00000200652 PPLO60437 1756 aa24.34■■□□□ 1.49
SLC22A4-201ENST00000200652 PPP4R2Q9NY27 417 aa24.34■■□□□ 1.49
SLC22A4-201ENST00000200652 GLI2P10070 1586 aa24.33■■□□□ 1.49
SLC22A4-201ENST00000200652 KDM5AP29375 1690 aaKnown RBP24.33■■□□□ 1.48
SLC22A4-201ENST00000200652 KNSTRNQ9Y448 316 aa24.33■■□□□ 1.48
SLC22A4-201ENST00000200652 SIGLEC1Q9BZZ2 1709 aa24.32■■□□□ 1.48
SLC22A4-201ENST00000200652 SLC24A1O60721 1099 aa24.3■■□□□ 1.48
SLC22A4-201ENST00000200652 SETBP1Q9Y6X0 1596 aa24.3■■□□□ 1.48
SLC22A4-201ENST00000200652 ERVK-7P63135 1459 aa24.29■■□□□ 1.48
SLC22A4-201ENST00000200652 AMER1Q5JTC6 1135 aaPredicted RBP24.29■■□□□ 1.48
SLC22A4-201ENST00000200652 RNF123Q5XPI4 1314 aa24.29■■□□□ 1.48
SLC22A4-201ENST00000200652 MYO3AQ8NEV4 1616 aa24.29■■□□□ 1.48
SLC22A4-201ENST00000200652 INSRP06213 1382 aa24.27■■□□□ 1.48
SLC22A4-201ENST00000200652 PIK3C2GO75747 1445 aa24.27■■□□□ 1.48
SLC22A4-201ENST00000200652 YEATS2Q9ULM3 1422 aa24.27■■□□□ 1.48
SLC22A4-201ENST00000200652 RIMBP3CA6NJZ7 1639 aa24.27■■□□□ 1.48
SLC22A4-201ENST00000200652 RIMBP3BA6NNM3 1639 aa24.27■■□□□ 1.48
SLC22A4-201ENST00000200652 RIMBP3Q9UFD9 1639 aa24.27■■□□□ 1.48
SLC22A4-201ENST00000200652 RPGRIP1LQ68CZ1 1315 aa24.27■■□□□ 1.48
SLC22A4-201ENST00000200652 ZMYM4Q5VZL5 1548 aa24.27■■□□□ 1.48
SLC22A4-201ENST00000200652 ASXL1Q8IXJ9 1541 aa24.26■■□□□ 1.47
SLC22A4-201ENST00000200652 PIK3C2BO00750 1634 aa24.26■■□□□ 1.47
SLC22A4-201ENST00000200652 C14orf93Q9H972 538 aaKnown RBP24.25■■□□□ 1.47
SLC22A4-201ENST00000200652 ZC3H13Q5T200 1668 aaKnown RBP24.25■■□□□ 1.47
SLC22A4-201ENST00000200652 BLMP54132 1417 aaPredicted RBP24.24■■□□□ 1.47
SLC22A4-201ENST00000200652 ARHGAP31Q2M1Z3 1444 aa24.24■■□□□ 1.47
SLC22A4-201ENST00000200652 SBNO2Q9Y2G9 1366 aa24.23■■□□□ 1.47
SLC22A4-201ENST00000200652 PPP2R1AP30153 589 aa24.23■■□□□ 1.47
SLC22A4-201ENST00000200652 NPC1L1Q9UHC9 1359 aa24.22■■□□□ 1.47
SLC22A4-201ENST00000200652 ADGRB1O14514 1584 aa24.21■■□□□ 1.47
SLC22A4-201ENST00000200652 SALL2Q9Y467 1007 aaPredicted RBP24.2■■□□□ 1.47
SLC22A4-201ENST00000200652 CENPJQ9HC77 1338 aaPredicted RBP24.2■■□□□ 1.46
SLC22A4-201ENST00000200652 PDE3BQ13370 1112 aa24.19■■□□□ 1.46
SLC22A4-201ENST00000200652 FAM69CQ0P6D2 419 aa24.19■■□□□ 1.46
SLC22A4-201ENST00000200652 DIP2BQ9P265 1576 aa24.19■■□□□ 1.46
SLC22A4-201ENST00000200652 TRAK1Q9UPV9 953 aa24.18■■□□□ 1.46
SLC22A4-201ENST00000200652 B4GALNT3Q6L9W6 998 aa24.17■■□□□ 1.46
SLC22A4-201ENST00000200652 NEXMIFQ5QGS0 1516 aa24.17■■□□□ 1.46
SLC22A4-201ENST00000200652 TMEM132EQ6IEE7 984 aa24.15■■□□□ 1.46
SLC22A4-201ENST00000200652 QRICH2Q9H0J4 1663 aa24.15■■□□□ 1.46
SLC22A4-201ENST00000200652 IDI1Q13907 227 aa24.14■■□□□ 1.46
SLC22A4-201ENST00000200652 ADAMTS8Q9UP79 889 aa24.14■■□□□ 1.46
SLC22A4-201ENST00000200652 VGFO15240 615 aaPredicted RBP24.14■■□□□ 1.45
SLC22A4-201ENST00000200652 CARD14Q9BXL6 1004 aa24.13■■□□□ 1.45
SLC22A4-201ENST00000200652 RBM19Q9Y4C8 960 aaKnown RBP24.12■■□□□ 1.45
SLC22A4-201ENST00000200652 TSPOAP1O95153 1857 aa24.12■■□□□ 1.45
SLC22A4-201ENST00000200652 NUTM2DQ5VT03 806 aaPredicted RBP24.12■■□□□ 1.45
SLC22A4-201ENST00000200652 SLC52A1Q9NWF4 448 aa24.12■■□□□ 1.45
SLC22A4-201ENST00000200652 PREX1Q8TCU6 1659 aa24.12■■□□□ 1.45
SLC22A4-201ENST00000200652 CDCA7LQ96GN5 454 aa24.1■■□□□ 1.45
SLC22A4-201ENST00000200652 WDR43Q15061 677 aaKnown RBP eCLIP24.08■■□□□ 1.45
SLC22A4-201ENST00000200652 MYO5BQ9ULV0 1848 aa24.08■■□□□ 1.45
SLC22A4-201ENST00000200652 RCAN3Q9UKA8 241 aa24.08■■□□□ 1.45
SLC22A4-201ENST00000200652 ZFYVE9O95405 1425 aa24.07■■□□□ 1.44
SLC22A4-201ENST00000200652 ARHGEF28Q8N1W1 1705 aaKnown RBP24.06■■□□□ 1.44
SLC22A4-201ENST00000200652 RRP1P56182 461 aaKnown RBP24.06■■□□□ 1.44
SLC22A4-201ENST00000200652 TMEM131LA2VDJ0 1609 aa24.05■■□□□ 1.44
SLC22A4-201ENST00000200652 REREQ9P2R6 1566 aa24.03■■□□□ 1.44
SLC22A4-201ENST00000200652 SLC12A5Q9H2X9 1139 aa24.02■■□□□ 1.44
SLC22A4-201ENST00000200652 FBXO31Q5XUX0 539 aaPredicted RBP24■■□□□ 1.43
SLC22A4-201ENST00000200652 AGLP35573 1532 aa24■■□□□ 1.43
SLC22A4-201ENST00000200652 NSD3Q9BZ95 1437 aa24■■□□□ 1.43
SLC22A4-201ENST00000200652 CCDC136Q96JN2 1154 aa23.99■■□□□ 1.43
SLC22A4-201ENST00000200652 PLEKHH1Q9ULM0 1364 aa23.99■■□□□ 1.43
SLC22A4-201ENST00000200652 PUS7Q96PZ0 661 aaKnown RBP23.98■■□□□ 1.43
SLC22A4-201ENST00000200652 TULP4Q9NRJ4 1543 aa23.98■■□□□ 1.43
SLC22A4-201ENST00000200652 EVC2Q86UK5 1308 aa23.97■■□□□ 1.43
SLC22A4-201ENST00000200652 PPP6R1Q9UPN7 881 aa23.96■■□□□ 1.43
SLC22A4-201ENST00000200652 ZNF521Q96K83 1311 aa23.95■■□□□ 1.42
SLC22A4-201ENST00000200652 USP32Q8NFA0 1604 aa23.94■■□□□ 1.42
SLC22A4-201ENST00000200652 CLTCQ00610 1675 aaKnown RBP23.93■■□□□ 1.42
SLC22A4-201ENST00000200652 EXOC6Q8TAG9 804 aa23.92■■□□□ 1.42
SLC22A4-201ENST00000200652 SENP3Q9H4L4 574 aaPredicted RBP23.92■■□□□ 1.42
SLC22A4-201ENST00000200652 POLR3AO14802 1390 aaPredicted RBP23.92■■□□□ 1.42
SLC22A4-201ENST00000200652 MORC1Q86VD1 984 aa23.91■■□□□ 1.42
SLC22A4-201ENST00000200652 CCDC146Q8IYE0 955 aa23.91■■□□□ 1.42
SLC22A4-201ENST00000200652 STK26Q9P289 416 aa23.91■■□□□ 1.42
SLC22A4-201ENST00000200652 KIF13AQ9H1H9 1805 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms