RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 TESK2Q96S53 571 aa15.55■□□□□ 0.08
GPATCH1-201ENST00000170564 NOS1P29475 1434 aa15.55■□□□□ 0.08
GPATCH1-201ENST00000170564 ZC3H13Q5T200 1668 aaKnown RBP15.55■□□□□ 0.08
GPATCH1-201ENST00000170564 PPLO60437 1756 aa15.53■□□□□ 0.08
GPATCH1-201ENST00000170564 ADGRF5Q8IZF2 1346 aa15.53■□□□□ 0.08
GPATCH1-201ENST00000170564 NRXN1Q9ULB1 1477 aa15.53■□□□□ 0.08
GPATCH1-201ENST00000170564 MYOM2P54296 1465 aa15.52■□□□□ 0.08
GPATCH1-201ENST00000170564 DISP3Q9P2K9 1392 aa15.52■□□□□ 0.08
GPATCH1-201ENST00000170564 PRKRIP1Q9H875 184 aaPredicted RBP15.52■□□□□ 0.08
GPATCH1-201ENST00000170564 REREQ9P2R6 1566 aa15.52■□□□□ 0.08
GPATCH1-201ENST00000170564 KIAA1210Q9ULL0 1709 aa15.52■□□□□ 0.07
GPATCH1-201ENST00000170564 ARID4BQ4LE39 1312 aaPredicted RBP15.51■□□□□ 0.07
GPATCH1-201ENST00000170564 ARHGAP31Q2M1Z3 1444 aa15.5■□□□□ 0.07
GPATCH1-201ENST00000170564 PREX1Q8TCU6 1659 aa15.5■□□□□ 0.07
GPATCH1-201ENST00000170564 MYO5BQ9ULV0 1848 aa15.5■□□□□ 0.07
GPATCH1-201ENST00000170564 POLR3GLQ9BT43 218 aa15.49■□□□□ 0.07
GPATCH1-201ENST00000170564 ARHGEF40Q8TER5 1519 aa15.48■□□□□ 0.07
GPATCH1-201ENST00000170564 AGLP35573 1532 aa15.47■□□□□ 0.07
GPATCH1-201ENST00000170564 CFAP70Q5T0N1 1121 aa15.47■□□□□ 0.07
GPATCH1-201ENST00000170564 CLTCQ00610 1675 aaKnown RBP15.46■□□□□ 0.06
GPATCH1-201ENST00000170564 NEXMIFQ5QGS0 1516 aa15.45■□□□□ 0.06
GPATCH1-201ENST00000170564 PIK3C2GO75747 1445 aa15.45■□□□□ 0.06
GPATCH1-201ENST00000170564 SCAF11Q99590 1463 aaKnown RBP15.45■□□□□ 0.06
GPATCH1-201ENST00000170564 FBXO31Q5XUX0 539 aaPredicted RBP15.44■□□□□ 0.06
GPATCH1-201ENST00000170564 STAC3Q96MF2 364 aa15.44■□□□□ 0.06
GPATCH1-201ENST00000170564 TMEM131LA2VDJ0 1609 aa15.44■□□□□ 0.06
GPATCH1-201ENST00000170564 IDI1Q13907 227 aa15.43■□□□□ 0.06
GPATCH1-201ENST00000170564 ADGRB1O14514 1584 aa15.43■□□□□ 0.06
GPATCH1-201ENST00000170564 MSH5O43196 834 aa15.42■□□□□ 0.06
GPATCH1-201ENST00000170564 CHGAP10645 457 aaKnown RBP15.42■□□□□ 0.06
GPATCH1-201ENST00000170564 MYOM1P52179 1685 aa15.41■□□□□ 0.06
GPATCH1-201ENST00000170564 CNGB1Q14028 1251 aaPredicted RBP15.41■□□□□ 0.06
GPATCH1-201ENST00000170564 PER1O15534 1290 aaPredicted RBP15.41■□□□□ 0.06
GPATCH1-201ENST00000170564 HNRNPUQ00839 825 aaKnown RBP eCLIP15.4■□□□□ 0.06
GPATCH1-201ENST00000170564 ERVK-7P63135 1459 aa15.4■□□□□ 0.06
GPATCH1-201ENST00000170564 NUTM2DQ5VT03 806 aaPredicted RBP15.4■□□□□ 0.06
GPATCH1-201ENST00000170564 SETBP1Q9Y6X0 1596 aa15.4■□□□□ 0.06
GPATCH1-201ENST00000170564 MYO3AQ8NEV4 1616 aa15.39■□□□□ 0.05
GPATCH1-201ENST00000170564 SPATA31D1Q6ZQQ2 1576 aa15.36■□□□□ 0.05
GPATCH1-201ENST00000170564 MLECQ14165 292 aa15.36■□□□□ 0.05
GPATCH1-201ENST00000170564 C14orf93Q9H972 538 aaKnown RBP15.36■□□□□ 0.05
GPATCH1-201ENST00000170564 ASXL1Q8IXJ9 1541 aa15.35■□□□□ 0.05
GPATCH1-201ENST00000170564 TMF1P82094 1093 aa15.34■□□□□ 0.05
GPATCH1-201ENST00000170564 TMEM132EQ6IEE7 984 aa15.34■□□□□ 0.05
GPATCH1-201ENST00000170564 RPGRIP1LQ68CZ1 1315 aa15.34■□□□□ 0.05
GPATCH1-201ENST00000170564 MRS2Q9HD23 443 aa15.34■□□□□ 0.05
GPATCH1-201ENST00000170564 SLC52A1Q9NWF4 448 aa15.33■□□□□ 0.05
GPATCH1-201ENST00000170564 PANK3Q9H999 370 aa15.33■□□□□ 0.04
GPATCH1-201ENST00000170564 ARHGEF28Q8N1W1 1705 aaKnown RBP15.32■□□□□ 0.04
GPATCH1-201ENST00000170564 QRICH2Q9H0J4 1663 aa15.32■□□□□ 0.04
GPATCH1-201ENST00000170564 PARD3Q8TEW0 1356 aa15.32■□□□□ 0.04
GPATCH1-201ENST00000170564 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
GPATCH1-201ENST00000170564 KDM5AP29375 1690 aaKnown RBP15.31■□□□□ 0.04
GPATCH1-201ENST00000170564 ZFYVE9O95405 1425 aa15.31■□□□□ 0.04
GPATCH1-201ENST00000170564 FAM9BQ8IZU0 186 aa15.3■□□□□ 0.04
GPATCH1-201ENST00000170564 NBR1Q14596 966 aa15.3■□□□□ 0.04
GPATCH1-201ENST00000170564 PPP6R1Q9UPN7 881 aa15.3■□□□□ 0.04
GPATCH1-201ENST00000170564 EIF3AQ14152 1382 aaKnown RBP15.3■□□□□ 0.04
GPATCH1-201ENST00000170564 A2ML1A8K2U0 1454 aa15.29■□□□□ 0.04
GPATCH1-201ENST00000170564 TRAK1Q9UPV9 953 aa15.29■□□□□ 0.04
GPATCH1-201ENST00000170564 ZMYM3Q14202 1370 aa15.28■□□□□ 0.04
GPATCH1-201ENST00000170564 SBNO2Q9Y2G9 1366 aa15.27■□□□□ 0.03
GPATCH1-201ENST00000170564 SETD1AO15047 1707 aaKnown RBP15.27■□□□□ 0.03
GPATCH1-201ENST00000170564 VGFO15240 615 aaPredicted RBP15.27■□□□□ 0.03
GPATCH1-201ENST00000170564 PNISRQ8TF01 805 aaKnown RBP15.26■□□□□ 0.03
GPATCH1-201ENST00000170564 MYBBP1AQ9BQG0 1328 aaKnown RBP15.25■□□□□ 0.03
GPATCH1-201ENST00000170564 CC2D1BQ5T0F9 858 aaKnown RBP15.25■□□□□ 0.03
GPATCH1-201ENST00000170564 PTPRMP28827 1452 aa15.24■□□□□ 0.03
GPATCH1-201ENST00000170564 CENPJQ9HC77 1338 aaPredicted RBP15.24■□□□□ 0.03
GPATCH1-201ENST00000170564 ALKQ9UM73 1620 aa15.24■□□□□ 0.03
GPATCH1-201ENST00000170564 NRXN3Q9Y4C0 1643 aa15.24■□□□□ 0.03
GPATCH1-201ENST00000170564 TULP4Q9NRJ4 1543 aa15.24■□□□□ 0.03
GPATCH1-201ENST00000170564 KTN1Q86UP2 1357 aaKnown RBP15.24■□□□□ 0.03
GPATCH1-201ENST00000170564 DEKP35659 375 aaKnown RBP15.24■□□□□ 0.03
GPATCH1-201ENST00000170564 RALBP1Q15311 655 aa15.23■□□□□ 0.03
GPATCH1-201ENST00000170564 AMER1Q5JTC6 1135 aaPredicted RBP15.23■□□□□ 0.03
GPATCH1-201ENST00000170564 B4GALNT3Q6L9W6 998 aa15.23■□□□□ 0.03
GPATCH1-201ENST00000170564 LRPPRCP42704 1394 aaKnown RBP15.23■□□□□ 0.03
GPATCH1-201ENST00000170564 CARD14Q9BXL6 1004 aa15.22■□□□□ 0.03
GPATCH1-201ENST00000170564 BRD4O60885 1362 aaPredicted RBP15.21■□□□□ 0.03
GPATCH1-201ENST00000170564 SENP3-EIF4A1A0A087X0R7 540 aa15.21■□□□□ 0.03
GPATCH1-201ENST00000170564 UBR1Q8IWV7 1749 aa15.2■□□□□ 0.02
GPATCH1-201ENST00000170564 FANCIQ9NVI1 1328 aa15.2■□□□□ 0.02
GPATCH1-201ENST00000170564 RIMS2Q9UQ26 1411 aa15.19■□□□□ 0.02
GPATCH1-201ENST00000170564 C3P01024 1663 aa15.18■□□□□ 0.02
GPATCH1-201ENST00000170564 TRHP20396 242 aaPredicted RBP15.18■□□□□ 0.02
GPATCH1-201ENST00000170564 CDCA8Q53HL2 280 aa15.18■□□□□ 0.02
GPATCH1-201ENST00000170564 TMC1Q8TDI8 760 aa15.18■□□□□ 0.02
GPATCH1-201ENST00000170564 YTHDC2Q9H6S0 1430 aaKnown RBP15.18■□□□□ 0.02
GPATCH1-201ENST00000170564 ZBED9Q6R2W3 1325 aa15.17■□□□□ 0.02
GPATCH1-201ENST00000170564 CEBPAP49715 358 aaPredicted RBP15.17■□□□□ 0.02
GPATCH1-201ENST00000170564 NLRP13Q86W25 1043 aa15.17■□□□□ 0.02
GPATCH1-201ENST00000170564 STK26Q9P289 416 aa15.17■□□□□ 0.02
GPATCH1-201ENST00000170564 SAFB2Q14151 953 aaKnown RBP eCLIP15.16■□□□□ 0.02
GPATCH1-201ENST00000170564 TNRQ92752 1358 aa15.15■□□□□ 0.02
GPATCH1-201ENST00000170564 FER1L4A9Z1Z3 1794 aa15.15■□□□□ 0.02
GPATCH1-201ENST00000170564 SLC12A5Q9H2X9 1139 aa15.15■□□□□ 0.02
GPATCH1-201ENST00000170564 STAG3Q9UJ98 1225 aa15.15■□□□□ 0.02
GPATCH1-201ENST00000170564 PPP4R2Q9NY27 417 aa15.14■□□□□ 0.01
GPATCH1-201ENST00000170564 KNSTRNQ9Y448 316 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms