RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 CCDC141Q6ZP82 1450 aa21.45■■□□□ 1.02
CTDP1-201ENST00000075430 MBD5Q9P267 1494 aa21.44■■□□□ 1.02
CTDP1-201ENST00000075430 RRAGDQ9NQL2 400 aaPredicted RBP21.44■■□□□ 1.02
CTDP1-201ENST00000075430 ERBINQ96RT1 1412 aa21.44■■□□□ 1.02
CTDP1-201ENST00000075430 SAFB2Q14151 953 aaKnown RBP eCLIP21.43■■□□□ 1.02
CTDP1-201ENST00000075430 ITSN2Q9NZM3 1697 aa21.41■■□□□ 1.02
CTDP1-201ENST00000075430 SYCP2Q9BX26 1530 aa21.4■■□□□ 1.02
CTDP1-201ENST00000075430 ADGRL2O95490 1459 aa21.39■■□□□ 1.02
CTDP1-201ENST00000075430 ABCC10Q5T3U5 1492 aa21.39■■□□□ 1.02
CTDP1-201ENST00000075430 NPM1P06748 294 aaKnown RBP eCLIP21.39■■□□□ 1.01
CTDP1-201ENST00000075430 CFAP70Q5T0N1 1121 aa21.39■■□□□ 1.01
CTDP1-201ENST00000075430 PDZRN3Q9UPQ7 1066 aa21.39■■□□□ 1.01
CTDP1-201ENST00000075430 RLBP1P12271 317 aa21.38■■□□□ 1.01
CTDP1-201ENST00000075430 AMER1Q5JTC6 1135 aaPredicted RBP21.38■■□□□ 1.01
CTDP1-201ENST00000075430 PCDHB15Q9Y5E8 787 aa21.38■■□□□ 1.01
CTDP1-201ENST00000075430 FTSJ3Q8IY81 847 aaKnown RBP21.37■■□□□ 1.01
CTDP1-201ENST00000075430 HSP90AA1P07900 732 aaKnown RBP21.36■■□□□ 1.01
CTDP1-201ENST00000075430 TBC1D2Q9BYX2 928 aa21.36■■□□□ 1.01
CTDP1-201ENST00000075430 PRAG1Q86YV5 1406 aa21.36■■□□□ 1.01
CTDP1-201ENST00000075430 E9PSI1 815 aa21.35■■□□□ 1.01
CTDP1-201ENST00000075430 TRAK1Q9UPV9 953 aa21.35■■□□□ 1.01
CTDP1-201ENST00000075430 GOLGA6L3A6NEY3 463 aa21.35■■□□□ 1.01
CTDP1-201ENST00000075430 FAM135AQ9P2D6 1515 aa21.35■■□□□ 1.01
CTDP1-201ENST00000075430 MORC1Q86VD1 984 aa21.34■■□□□ 1.01
CTDP1-201ENST00000075430 UHRF1BP1Q6BDS2 1440 aa21.34■■□□□ 1.01
CTDP1-201ENST00000075430 FAM43AQ8N2R8 423 aa21.33■■□□□ 1.01
CTDP1-201ENST00000075430 USP19O94966 1318 aa21.33■■□□□ 1
CTDP1-201ENST00000075430 U2SURPO15042 1029 aaKnown RBP21.33■■□□□ 1
CTDP1-201ENST00000075430 ARID3AQ99856 593 aa21.33■■□□□ 1
CTDP1-201ENST00000075430 PNNQ9H307 717 aaKnown RBP21.33■■□□□ 1
CTDP1-201ENST00000075430 ZBTB7CA1YPR0 619 aa21.32■■□□□ 1
CTDP1-201ENST00000075430 TSR2Q969E8 191 aaKnown RBP21.32■■□□□ 1
CTDP1-201ENST00000075430 RSPH6AQ9H0K4 717 aa21.32■■□□□ 1
CTDP1-201ENST00000075430 WWC1Q8IX03 1113 aa21.31■■□□□ 1
CTDP1-201ENST00000075430 ABCA8O94911 1581 aa21.3■■□□□ 1
CTDP1-201ENST00000075430 U2AF1L5P0DN76 240 aaPredicted RBP21.3■■□□□ 1
CTDP1-201ENST00000075430 U2AF1Q01081 240 aaKnown RBP eCLIP21.3■■□□□ 1
CTDP1-201ENST00000075430 TCP11L2Q8N4U5 519 aa21.3■■□□□ 1
CTDP1-201ENST00000075430 VSIG10Q8N0Z9 540 aa21.3■■□□□ 1
CTDP1-201ENST00000075430 XRCC6P12956 609 aaKnown RBP eCLIP21.29■■□□□ 1
CTDP1-201ENST00000075430 TMEM132EQ6IEE7 984 aa21.29■■□□□ 1
CTDP1-201ENST00000075430 ITPRIPQ8IWB1 547 aa21.29■■□□□ 1
CTDP1-201ENST00000075430 TRAPPC8Q9Y2L5 1435 aa21.29■■□□□ 1
CTDP1-201ENST00000075430 CGNL1Q0VF96 1302 aa21.29■■□□□ 1
CTDP1-201ENST00000075430 SLC12A5Q9H2X9 1139 aa21.29■■□□□ 1
CTDP1-201ENST00000075430 SCAPERQ9BY12 1400 aa21.29■■□□□ 1
CTDP1-201ENST00000075430 CDCA8Q53HL2 280 aa21.28■■□□□ 1
CTDP1-201ENST00000075430 CDC42BPAQ5VT25 1732 aa21.28■■□□□ 1
CTDP1-201ENST00000075430 UBE2Q2Q8WVN8 375 aa21.28■■□□□ 1
CTDP1-201ENST00000075430 ERCC6L2Q5T890 1561 aa21.27■■□□□ 1
CTDP1-201ENST00000075430 BLMP54132 1417 aaPredicted RBP21.27■■□□□ 1
CTDP1-201ENST00000075430 L1TD1Q5T7N2 865 aaKnown RBP21.27■■□□□ 1
CTDP1-201ENST00000075430 STK26Q9P289 416 aa21.27■■□□□ 1
CTDP1-201ENST00000075430 KANK1Q14678 1352 aa21.26■□□□□ 0.99
CTDP1-201ENST00000075430 MAGI2Q86UL8 1455 aa21.26■□□□□ 0.99
CTDP1-201ENST00000075430 ADGBQ8N7X0 1667 aa21.26■□□□□ 0.99
CTDP1-201ENST00000075430 MAPK8IP3Q9UPT6 1336 aa21.25■□□□□ 0.99
CTDP1-201ENST00000075430 A2MP01023 1474 aa21.25■□□□□ 0.99
CTDP1-201ENST00000075430 TPRNQ4KMQ1 711 aa21.25■□□□□ 0.99
CTDP1-201ENST00000075430 CARD14Q9BXL6 1004 aa21.25■□□□□ 0.99
CTDP1-201ENST00000075430 POLR1AO95602 1720 aaPredicted RBP21.24■□□□□ 0.99
CTDP1-201ENST00000075430 TRAK2O60296 914 aa21.24■□□□□ 0.99
CTDP1-201ENST00000075430 SMC4Q9NTJ3 1288 aa21.24■□□□□ 0.99
CTDP1-201ENST00000075430 NCLP19338 710 aaKnown RBP21.23■□□□□ 0.99
CTDP1-201ENST00000075430 C22orf23Q9BZE7 217 aa21.23■□□□□ 0.99
CTDP1-201ENST00000075430 SAMD9LQ8IVG5 1584 aa21.23■□□□□ 0.99
CTDP1-201ENST00000075430 SHANK2Q9UPX8 1470 aa21.23■□□□□ 0.99
CTDP1-201ENST00000075430 ZMYM4Q5VZL5 1548 aa21.23■□□□□ 0.99
CTDP1-201ENST00000075430 RWDD1Q9H446 243 aaPredicted RBP21.22■□□□□ 0.99
CTDP1-201ENST00000075430 PLA2R1Q13018 1463 aa21.22■□□□□ 0.99
CTDP1-201ENST00000075430 MCM4P33991 863 aa21.22■□□□□ 0.99
CTDP1-201ENST00000075430 MTHFSP49914 203 aa21.22■□□□□ 0.99
CTDP1-201ENST00000075430 RARSP54136 660 aaKnown RBP21.22■□□□□ 0.99
CTDP1-201ENST00000075430 LNPKQ9C0E8 428 aa21.22■□□□□ 0.99
CTDP1-201ENST00000075430 ZNF521Q96K83 1311 aa21.22■□□□□ 0.99
CTDP1-201ENST00000075430 ELL2O00472 640 aaPredicted RBP21.22■□□□□ 0.99
CTDP1-201ENST00000075430 COL17A1Q9UMD9 1497 aaPredicted RBP21.22■□□□□ 0.99
CTDP1-201ENST00000075430 PMFBP1Q8TBY8 1022 aa21.21■□□□□ 0.99
CTDP1-201ENST00000075430 TRIM44Q96DX7 344 aaPredicted RBP21.21■□□□□ 0.99
CTDP1-201ENST00000075430 ADGRF5Q8IZF2 1346 aa21.21■□□□□ 0.99
CTDP1-201ENST00000075430 NKTRP30414 1462 aaKnown RBP21.2■□□□□ 0.99
CTDP1-201ENST00000075430 HSCBQ8IWL3 235 aa21.2■□□□□ 0.98
CTDP1-201ENST00000075430 HSP90AB1P08238 724 aaKnown RBP21.19■□□□□ 0.98
CTDP1-201ENST00000075430 PDE3AQ14432 1141 aa21.18■□□□□ 0.98
CTDP1-201ENST00000075430 MYH16Q9H6N6 1097 aa21.18■□□□□ 0.98
CTDP1-201ENST00000075430 TTC37Q6PGP7 1564 aa21.17■□□□□ 0.98
CTDP1-201ENST00000075430 APBB1O00213 710 aa21.17■□□□□ 0.98
CTDP1-201ENST00000075430 TBC1D32Q96NH3 1257 aa21.17■□□□□ 0.98
CTDP1-201ENST00000075430 C1orf115Q9H7X2 142 aa21.17■□□□□ 0.98
CTDP1-201ENST00000075430 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.16■□□□□ 0.98
CTDP1-201ENST00000075430 ARHGEF12Q9NZN5 1544 aa21.16■□□□□ 0.98
CTDP1-201ENST00000075430 HSP90AA2PQ14568 343 aaPredicted RBP21.15■□□□□ 0.98
CTDP1-201ENST00000075430 EXOSC9Q06265 439 aaKnown RBP21.14■□□□□ 0.97
CTDP1-201ENST00000075430 STAG3Q9UJ98 1225 aa21.14■□□□□ 0.97
CTDP1-201ENST00000075430 PLCH2O75038 1416 aa21.13■□□□□ 0.97
CTDP1-201ENST00000075430 DZIP1LQ8IYY4 767 aaKnown RBP21.13■□□□□ 0.97
CTDP1-201ENST00000075430 FOXD4L5Q5VV16 416 aaPredicted RBP21.12■□□□□ 0.97
CTDP1-201ENST00000075430 FOXD4L4Q8WXT5 416 aaPredicted RBP21.12■□□□□ 0.97
CTDP1-201ENST00000075430 EIF3AQ14152 1382 aaKnown RBP21.12■□□□□ 0.97
CTDP1-201ENST00000075430 RAPGEF3O95398 923 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms