RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 TBC1D2Q9BYX2 928 aa25.66■■□□□ 1.7
PPP1R3F-201ENST00000055335 MAGI2Q86UL8 1455 aa25.66■■□□□ 1.7
PPP1R3F-201ENST00000055335 MAPK8IP3Q9UPT6 1336 aa25.66■■□□□ 1.7
PPP1R3F-201ENST00000055335 MFAP1P55081 439 aaKnown RBP25.65■■□□□ 1.7
PPP1R3F-201ENST00000055335 FAM135AQ9P2D6 1515 aa25.64■■□□□ 1.7
PPP1R3F-201ENST00000055335 KDM5DQ9BY66 1539 aa25.64■■□□□ 1.69
PPP1R3F-201ENST00000055335 ITSN2Q9NZM3 1697 aa25.64■■□□□ 1.69
PPP1R3F-201ENST00000055335 PNNQ9H307 717 aaKnown RBP25.63■■□□□ 1.69
PPP1R3F-201ENST00000055335 PDZRN3Q9UPQ7 1066 aa25.63■■□□□ 1.69
PPP1R3F-201ENST00000055335 CEP170Q5SW79 1584 aa25.63■■□□□ 1.69
PPP1R3F-201ENST00000055335 NKTRP30414 1462 aaKnown RBP25.63■■□□□ 1.69
PPP1R3F-201ENST00000055335 XRCC6P12956 609 aaKnown RBP eCLIP25.63■■□□□ 1.69
PPP1R3F-201ENST00000055335 PCDHB15Q9Y5E8 787 aa25.62■■□□□ 1.69
PPP1R3F-201ENST00000055335 CDCA8Q53HL2 280 aa25.62■■□□□ 1.69
PPP1R3F-201ENST00000055335 EIF3AQ14152 1382 aaKnown RBP25.61■■□□□ 1.69
PPP1R3F-201ENST00000055335 CARMIL2Q6F5E8 1435 aa25.59■■□□□ 1.69
PPP1R3F-201ENST00000055335 GPRASP1Q5JY77 1395 aa25.59■■□□□ 1.69
PPP1R3F-201ENST00000055335 RLBP1P12271 317 aa25.59■■□□□ 1.69
PPP1R3F-201ENST00000055335 MAGI1Q96QZ7 1491 aaPredicted RBP25.58■■□□□ 1.69
PPP1R3F-201ENST00000055335 PDE3AQ14432 1141 aa25.58■■□□□ 1.69
PPP1R3F-201ENST00000055335 PLA2R1Q13018 1463 aa25.58■■□□□ 1.68
PPP1R3F-201ENST00000055335 WWC1Q8IX03 1113 aa25.57■■□□□ 1.68
PPP1R3F-201ENST00000055335 GRIN2AQ12879 1464 aa25.57■■□□□ 1.68
PPP1R3F-201ENST00000055335 TRMT2AQ8IZ69 625 aaKnown RBP25.56■■□□□ 1.68
PPP1R3F-201ENST00000055335 TRPM1Q7Z4N2 1603 aa25.56■■□□□ 1.68
PPP1R3F-201ENST00000055335 ANTXR1Q9H6X2 564 aa25.54■■□□□ 1.68
PPP1R3F-201ENST00000055335 INSRP06213 1382 aa25.54■■□□□ 1.68
PPP1R3F-201ENST00000055335 MCM4P33991 863 aa25.54■■□□□ 1.68
PPP1R3F-201ENST00000055335 PMFBP1Q8TBY8 1022 aa25.54■■□□□ 1.68
PPP1R3F-201ENST00000055335 TBC1D32Q96NH3 1257 aa25.54■■□□□ 1.68
PPP1R3F-201ENST00000055335 PTPRGP23470 1445 aa25.54■■□□□ 1.68
PPP1R3F-201ENST00000055335 VSIG10Q8N0Z9 540 aa25.52■■□□□ 1.68
PPP1R3F-201ENST00000055335 TRAK2O60296 914 aa25.52■■□□□ 1.68
PPP1R3F-201ENST00000055335 ATP10BO94823 1461 aa25.51■■□□□ 1.67
PPP1R3F-201ENST00000055335 CROCC2H7BZ55 1655 aa25.51■■□□□ 1.67
PPP1R3F-201ENST00000055335 WDR7Q9Y4E6 1490 aa25.51■■□□□ 1.67
PPP1R3F-201ENST00000055335 FTSJ3Q8IY81 847 aaKnown RBP25.51■■□□□ 1.67
PPP1R3F-201ENST00000055335 FOXD4L1Q9NU39 408 aa25.5■■□□□ 1.67
PPP1R3F-201ENST00000055335 SENP3Q9H4L4 574 aaPredicted RBP25.5■■□□□ 1.67
PPP1R3F-201ENST00000055335 RARSP54136 660 aaKnown RBP25.49■■□□□ 1.67
PPP1R3F-201ENST00000055335 RWDD1Q9H446 243 aaPredicted RBP25.49■■□□□ 1.67
PPP1R3F-201ENST00000055335 C22orf23Q9BZE7 217 aa25.49■■□□□ 1.67
PPP1R3F-201ENST00000055335 TCP11L2Q8N4U5 519 aa25.48■■□□□ 1.67
PPP1R3F-201ENST00000055335 SHANK2Q9UPX8 1470 aa25.48■■□□□ 1.67
PPP1R3F-201ENST00000055335 MORC1Q86VD1 984 aa25.47■■□□□ 1.67
PPP1R3F-201ENST00000055335 CFAP70Q5T0N1 1121 aa25.47■■□□□ 1.67
PPP1R3F-201ENST00000055335 CCDC141Q6ZP82 1450 aa25.47■■□□□ 1.67
PPP1R3F-201ENST00000055335 CARD14Q9BXL6 1004 aa25.46■■□□□ 1.67
PPP1R3F-201ENST00000055335 HSP90AA1P07900 732 aaKnown RBP25.46■■□□□ 1.67
PPP1R3F-201ENST00000055335 GLIPR1L2Q4G1C9 344 aa25.46■■□□□ 1.67
PPP1R3F-201ENST00000055335 MYH16Q9H6N6 1097 aa25.45■■□□□ 1.66
PPP1R3F-201ENST00000055335 CDC42BPAQ5VT25 1732 aa25.45■■□□□ 1.66
PPP1R3F-201ENST00000055335 PRDM15P57071 1507 aaPredicted RBP25.45■■□□□ 1.66
PPP1R3F-201ENST00000055335 CHGAP10645 457 aaKnown RBP25.45■■□□□ 1.66
PPP1R3F-201ENST00000055335 HSP90AA2PQ14568 343 aaPredicted RBP25.45■■□□□ 1.66
PPP1R3F-201ENST00000055335 EIF4G3O43432 1585 aaKnown RBP25.44■■□□□ 1.66
PPP1R3F-201ENST00000055335 ABCC10Q5T3U5 1492 aa25.44■■□□□ 1.66
PPP1R3F-201ENST00000055335 RSPH4AQ5TD94 716 aa25.44■■□□□ 1.66
PPP1R3F-201ENST00000055335 MRC2Q9UBG0 1479 aa25.43■■□□□ 1.66
PPP1R3F-201ENST00000055335 CHMP5Q9NZZ3 219 aa25.43■■□□□ 1.66
PPP1R3F-201ENST00000055335 HSCBQ8IWL3 235 aa25.43■■□□□ 1.66
PPP1R3F-201ENST00000055335 TRIM44Q96DX7 344 aaPredicted RBP25.42■■□□□ 1.66
PPP1R3F-201ENST00000055335 ASXL1Q8IXJ9 1541 aa25.41■■□□□ 1.66
PPP1R3F-201ENST00000055335 ITPRIPQ8IWB1 547 aa25.4■■□□□ 1.66
PPP1R3F-201ENST00000055335 TSR2Q969E8 191 aaKnown RBP25.4■■□□□ 1.66
PPP1R3F-201ENST00000055335 IFT140Q96RY7 1462 aa25.39■■□□□ 1.65
PPP1R3F-201ENST00000055335 PIK3C2GO75747 1445 aa25.38■■□□□ 1.65
PPP1R3F-201ENST00000055335 ADCY10Q96PN6 1610 aa25.37■■□□□ 1.65
PPP1R3F-201ENST00000055335 U2AF1L5P0DN76 240 aaPredicted RBP25.37■■□□□ 1.65
PPP1R3F-201ENST00000055335 U2AF1Q01081 240 aaKnown RBP eCLIP25.37■■□□□ 1.65
PPP1R3F-201ENST00000055335 GRPEL1Q9HAV7 217 aa25.37■■□□□ 1.65
PPP1R3F-201ENST00000055335 PKNOX2Q96KN3 472 aa25.36■■□□□ 1.65
PPP1R3F-201ENST00000055335 RUNDC1Q96C34 613 aa25.36■■□□□ 1.65
PPP1R3F-201ENST00000055335 SMC4Q9NTJ3 1288 aa25.36■■□□□ 1.65
PPP1R3F-201ENST00000055335 SLC12A5Q9H2X9 1139 aa25.35■■□□□ 1.65
PPP1R3F-201ENST00000055335 MRE11P49959 708 aa25.35■■□□□ 1.65
PPP1R3F-201ENST00000055335 CLCN1P35523 988 aa25.34■■□□□ 1.65
PPP1R3F-201ENST00000055335 SYCP2Q9BX26 1530 aa25.34■■□□□ 1.65
PPP1R3F-201ENST00000055335 HSP90AB1P08238 724 aaKnown RBP25.34■■□□□ 1.65
PPP1R3F-201ENST00000055335 MTHFSP49914 203 aa25.34■■□□□ 1.65
PPP1R3F-201ENST00000055335 FSD2A1L4K1 749 aa25.34■■□□□ 1.65
PPP1R3F-201ENST00000055335 TRAK1Q9UPV9 953 aa25.34■■□□□ 1.65
PPP1R3F-201ENST00000055335 ARHGAP5Q13017 1502 aa25.33■■□□□ 1.65
PPP1R3F-201ENST00000055335 DZIP1LQ8IYY4 767 aaKnown RBP25.33■■□□□ 1.65
PPP1R3F-201ENST00000055335 ZKSCAN2Q63HK3 967 aa25.32■■□□□ 1.64
PPP1R3F-201ENST00000055335 NLRP1Q9C000 1473 aa25.31■■□□□ 1.64
PPP1R3F-201ENST00000055335 MVPQ14764 893 aaKnown RBP25.31■■□□□ 1.64
PPP1R3F-201ENST00000055335 ESPNB1AK53 854 aa25.31■■□□□ 1.64
PPP1R3F-201ENST00000055335 U2SURPO15042 1029 aaKnown RBP25.31■■□□□ 1.64
PPP1R3F-201ENST00000055335 LNPKQ9C0E8 428 aa25.3■■□□□ 1.64
PPP1R3F-201ENST00000055335 ZMYND15Q9H091 742 aa25.29■■□□□ 1.64
PPP1R3F-201ENST00000055335 SCAF11Q99590 1463 aaKnown RBP25.29■■□□□ 1.64
PPP1R3F-201ENST00000055335 AFAP1Q8N556 730 aa25.28■■□□□ 1.64
PPP1R3F-201ENST00000055335 NUP160Q12769 1436 aa25.28■■□□□ 1.64
PPP1R3F-201ENST00000055335 SYNJ2O15056 1496 aa25.27■■□□□ 1.64
PPP1R3F-201ENST00000055335 ERBB4Q15303 1308 aa25.27■■□□□ 1.64
PPP1R3F-201ENST00000055335 DDX11L8A8MPP1 907 aa25.27■■□□□ 1.64
PPP1R3F-201ENST00000055335 SAMD9LQ8IVG5 1584 aa25.26■■□□□ 1.63
PPP1R3F-201ENST00000055335 EXOSC9Q06265 439 aaKnown RBP25.25■■□□□ 1.63
PPP1R3F-201ENST00000055335 ADGRF5Q8IZF2 1346 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms