RNA–Protein interactions for RNA: ENST00000025008.9

RB1CC1-201, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-201ENST00000025008 ROCK1Q13464 1354 aa19.4■□□□□ 0.7
RB1CC1-201ENST00000025008 CPLX2Q6PUV4 134 aaKnown RBP19.4■□□□□ 0.7
RB1CC1-201ENST00000025008 KIF3BO15066 747 aa19.39■□□□□ 0.7
RB1CC1-201ENST00000025008 TOMM22Q9NS69 142 aa19.39■□□□□ 0.7
RB1CC1-201ENST00000025008 IFT57Q9NWB7 429 aa19.39■□□□□ 0.69
RB1CC1-201ENST00000025008 NOM1Q5C9Z4 860 aaKnown RBP19.38■□□□□ 0.69
RB1CC1-201ENST00000025008 CSB-PGBD3P0DP91 1061 aa19.38■□□□□ 0.69
RB1CC1-201ENST00000025008 MLECQ14165 292 aa19.38■□□□□ 0.69
RB1CC1-201ENST00000025008 UACAQ9BZF9 1416 aa19.38■□□□□ 0.69
RB1CC1-201ENST00000025008 SASS6Q6UVJ0 657 aa19.37■□□□□ 0.69
RB1CC1-201ENST00000025008 HNRNPMP52272 730 aaKnown RBP eCLIP19.37■□□□□ 0.691e-6■■■■■ 29.1
RB1CC1-201ENST00000025008 ACBD3Q9H3P7 528 aa19.37■□□□□ 0.69
RB1CC1-201ENST00000025008 ERCC6Q03468 1493 aa19.37■□□□□ 0.69
RB1CC1-201ENST00000025008 MNS1Q8NEH6 495 aa19.37■□□□□ 0.69
RB1CC1-201ENST00000025008 ANO2Q9NQ90 1003 aa19.36■□□□□ 0.69
RB1CC1-201ENST00000025008 SMC3Q9UQE7 1217 aa19.36■□□□□ 0.69
RB1CC1-201ENST00000025008 AMPHP49418 695 aa19.36■□□□□ 0.69
RB1CC1-201ENST00000025008 TRAK1Q9UPV9 953 aa19.36■□□□□ 0.69
RB1CC1-201ENST00000025008 HMGN5P82970 282 aaKnown RBP19.36■□□□□ 0.69
RB1CC1-201ENST00000025008 ANKRD20A12PQ8NF67 263 aa19.36■□□□□ 0.69
RB1CC1-201ENST00000025008 PKNOX2Q96KN3 472 aa19.36■□□□□ 0.69
RB1CC1-201ENST00000025008 KIF7Q2M1P5 1343 aa19.36■□□□□ 0.69
RB1CC1-201ENST00000025008 MBD3O95983 291 aa19.35■□□□□ 0.69
RB1CC1-201ENST00000025008 LRRFIP1Q32MZ4 808 aaKnown RBP19.35■□□□□ 0.69
RB1CC1-201ENST00000025008 RNF20Q5VTR2 975 aa19.35■□□□□ 0.69
RB1CC1-201ENST00000025008 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.34■□□□□ 0.698e-7■■■□□ 17.9
RB1CC1-201ENST00000025008 CCDC173Q0VFZ6 552 aa19.34■□□□□ 0.69
RB1CC1-201ENST00000025008 IL27Q8NEV9 243 aa19.34■□□□□ 0.69
RB1CC1-201ENST00000025008 CCDC66A2RUB6 948 aa19.34■□□□□ 0.69
RB1CC1-201ENST00000025008 FRAT2O75474 233 aaPredicted RBP19.34■□□□□ 0.69
RB1CC1-201ENST00000025008 HOOK1Q9UJC3 728 aaKnown RBP19.34■□□□□ 0.69
RB1CC1-201ENST00000025008 VPS37CA5D8V6 355 aaPredicted RBP19.33■□□□□ 0.69
RB1CC1-201ENST00000025008 ANO8Q9HCE9 1232 aaPredicted RBP19.33■□□□□ 0.69
RB1CC1-201ENST00000025008 BRD4O60885 1362 aaPredicted RBP19.33■□□□□ 0.69
RB1CC1-201ENST00000025008 AKAP17AQ02040 695 aaKnown RBP19.33■□□□□ 0.69
RB1CC1-201ENST00000025008 CDC45O75419 566 aa19.33■□□□□ 0.68
RB1CC1-201ENST00000025008 RUNDC1Q96C34 613 aa19.33■□□□□ 0.68
RB1CC1-201ENST00000025008 TOP2AP11388 1531 aaKnown RBP19.32■□□□□ 0.68
RB1CC1-201ENST00000025008 LNPKQ9C0E8 428 aa19.32■□□□□ 0.68
RB1CC1-201ENST00000025008 HSP90B2PQ58FF3 399 aa19.32■□□□□ 0.68
RB1CC1-201ENST00000025008 CCDC73Q6ZRK6 1079 aa19.32■□□□□ 0.68
RB1CC1-201ENST00000025008 EVC2Q86UK5 1308 aa19.32■□□□□ 0.68
RB1CC1-201ENST00000025008 SYNE3Q6ZMZ3 975 aa19.31■□□□□ 0.68
RB1CC1-201ENST00000025008 PDE4CQ08493 712 aa19.31■□□□□ 0.68
RB1CC1-201ENST00000025008 TRIM29Q14134 588 aa19.31■□□□□ 0.68
RB1CC1-201ENST00000025008 LETM1O95202 739 aaPredicted RBP19.3■□□□□ 0.68
RB1CC1-201ENST00000025008 TDRD9Q8NDG6 1382 aaKnown RBP19.3■□□□□ 0.68
RB1CC1-201ENST00000025008 MARCH6O60337 910 aa19.3■□□□□ 0.68
RB1CC1-201ENST00000025008 SMARCA2P51531 1590 aa19.3■□□□□ 0.68
RB1CC1-201ENST00000025008 CWC15Q9P013 229 aaKnown RBP19.29■□□□□ 0.68
RB1CC1-201ENST00000025008 CPLX1O14810 134 aa19.29■□□□□ 0.68
RB1CC1-201ENST00000025008 NGDNQ8NEJ9 315 aaKnown RBP19.29■□□□□ 0.68
RB1CC1-201ENST00000025008 AK7Q96M32 723 aa19.28■□□□□ 0.68
RB1CC1-201ENST00000025008 DIAPH1O60610 1272 aaKnown RBP19.28■□□□□ 0.68
RB1CC1-201ENST00000025008 IFIT2P09913 472 aaKnown RBP19.27■□□□□ 0.68
RB1CC1-201ENST00000025008 RIPK4P57078 832 aa19.27■□□□□ 0.68
RB1CC1-201ENST00000025008 RNF214Q8ND24 703 aa19.27■□□□□ 0.68
RB1CC1-201ENST00000025008 CCDC47Q96A33 483 aaKnown RBP19.27■□□□□ 0.68
RB1CC1-201ENST00000025008 COG3Q96JB2 828 aa19.27■□□□□ 0.68
RB1CC1-201ENST00000025008 CDR1P51861 262 aa19.27■□□□□ 0.68
RB1CC1-201ENST00000025008 CAVIN1Q6NZI2 390 aaKnown RBP19.27■□□□□ 0.67
RB1CC1-201ENST00000025008 BACH2Q9BYV9 841 aa19.27■□□□□ 0.67
RB1CC1-201ENST00000025008 PANK1Q8TE04 598 aa19.26■□□□□ 0.67
RB1CC1-201ENST00000025008 RUFY1Q96T51 708 aa19.26■□□□□ 0.67
RB1CC1-201ENST00000025008 NAT10Q9H0A0 1025 aaKnown RBP19.26■□□□□ 0.67
RB1CC1-201ENST00000025008 HSP90AB4PQ58FF6 505 aa19.25■□□□□ 0.67
RB1CC1-201ENST00000025008 WASHC2CQ9Y4E1 1318 aa19.24■□□□□ 0.67
RB1CC1-201ENST00000025008 GNAI1P63096 354 aa19.24■□□□□ 0.67
RB1CC1-201ENST00000025008 PCMTD1Q96MG8 357 aaPredicted RBP19.24■□□□□ 0.67
RB1CC1-201ENST00000025008 TSPY26PQ9H489 355 aa19.24■□□□□ 0.67
RB1CC1-201ENST00000025008 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.24■□□□□ 0.67
RB1CC1-201ENST00000025008 NEXNQ0ZGT2 675 aa19.24■□□□□ 0.67
RB1CC1-201ENST00000025008 MIA2Q96PC5 1412 aa19.24■□□□□ 0.67
RB1CC1-201ENST00000025008 MCM2P49736 904 aa19.23■□□□□ 0.67
RB1CC1-201ENST00000025008 C9orf78Q9NZ63 289 aaPredicted RBP19.23■□□□□ 0.67
RB1CC1-201ENST00000025008 WASHC2AQ641Q2 1341 aa19.23■□□□□ 0.67
RB1CC1-201ENST00000025008 RRP9O43818 475 aaKnown RBP19.23■□□□□ 0.67
RB1CC1-201ENST00000025008 RABEP1Q15276 862 aa19.22■□□□□ 0.67
RB1CC1-201ENST00000025008 LTV1Q96GA3 475 aaPredicted RBP19.22■□□□□ 0.67
RB1CC1-201ENST00000025008 ERC2O15083 957 aa19.22■□□□□ 0.67
RB1CC1-201ENST00000025008 ERCC4Q92889 916 aaPredicted RBP19.21■□□□□ 0.67
RB1CC1-201ENST00000025008 VGFO15240 615 aaPredicted RBP19.21■□□□□ 0.67
RB1CC1-201ENST00000025008 PATL2C9JE40 543 aaKnown RBP19.21■□□□□ 0.67
RB1CC1-201ENST00000025008 NUTM2DQ5VT03 806 aaPredicted RBP19.21■□□□□ 0.67
RB1CC1-201ENST00000025008 PRM3Q9NNZ6 103 aa19.21■□□□□ 0.67
RB1CC1-201ENST00000025008 TRIM5Q9C035 493 aa19.2■□□□□ 0.66
RB1CC1-201ENST00000025008 PDE3AQ14432 1141 aa19.2■□□□□ 0.66
RB1CC1-201ENST00000025008 TEFQ10587 303 aa19.2■□□□□ 0.66
RB1CC1-201ENST00000025008 PDS5BQ9NTI5 1447 aa19.2■□□□□ 0.66
RB1CC1-201ENST00000025008 STAC3Q96MF2 364 aa19.2■□□□□ 0.66
RB1CC1-201ENST00000025008 TRDNQ13061 729 aa19.19■□□□□ 0.66
RB1CC1-201ENST00000025008 GRPEL1Q9HAV7 217 aa19.19■□□□□ 0.66
RB1CC1-201ENST00000025008 CCP110O43303 1012 aa19.19■□□□□ 0.66
RB1CC1-201ENST00000025008 CALRP27797 417 aaKnown RBP19.18■□□□□ 0.66
RB1CC1-201ENST00000025008 FKBP5Q13451 457 aaPredicted RBP19.18■□□□□ 0.66
RB1CC1-201ENST00000025008 PRPF40AO75400 957 aaKnown RBP19.18■□□□□ 0.66
RB1CC1-201ENST00000025008 PDZRN3Q9UPQ7 1066 aa19.18■□□□□ 0.66
RB1CC1-201ENST00000025008 CCDC9Q9Y3X0 531 aaKnown RBP19.18■□□□□ 0.66
RB1CC1-201ENST00000025008 G3BP1Q13283 466 aaKnown RBP eCLIP19.18■□□□□ 0.66
RB1CC1-201ENST00000025008 TMX4Q9H1E5 349 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms