RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Atp2b2Q9R0K7 1198 aa16.9■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 Ccdc60Q8C4J0 545 aa16.88■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Tnnt1O88346 262 aa16.88■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Ttc21bQ0HA38 1315 aa16.88■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Nup160Q9Z0W3 1402 aaKnown RBP16.88■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Dnai1Q8C0M8 701 aa16.86■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Atp7aQ64430 1491 aa16.86■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Fancd2Q80V62 1450 aa16.86■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Rab3gap2Q8BMG7 1366 aa16.85■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Wdr7Q920I9 1489 aa16.85■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Zranb1Q7M760 708 aa16.85■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Adcy10Q8C0T9 1614 aa16.85■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Ccar1Q8CH18 1146 aaKnown RBP16.85■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Polr3aB2RXC6 1390 aa16.84■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Caskin1Q6P9K8 1431 aa16.84■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Iqcf3Q9D498 203 aa16.84■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Ralbp1Q62172 648 aa16.83■□□□□ 0.29
Pdgfra-205ENSMUST00000201711 Ssh2Q5SW75 1423 aa16.83■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Nectin2P32507 530 aa16.83■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Nutm1Q8BHP2 1126 aa16.83■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Peg3Q3URU2 1571 aa16.82■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Mfap1aC0HKD8 439 aaKnown RBP16.82■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Mfap1bC0HKD9 439 aaKnown RBP16.82■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Ttll13A4Q9F6 804 aa16.81■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Gsto1O09131 240 aa16.81■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Asxl1P59598 1514 aa16.8■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Plcb2A3KGF7 1181 aa16.8■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 GorabQ8BRM2 368 aa16.8■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Ythdc2B2RR83 1445 aaKnown RBP16.8■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Rtf1A2AQ19 715 aaKnown RBP16.79■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Kdm3bQ6ZPY7 1562 aa16.79■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Mug2P28666 1451 aa16.79■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Cabp4Q8VHC5 271 aa16.79■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Prkrip1Q9CWV6 186 aaKnown RBP16.79■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Ipo8Q7TMY7 1010 aa16.77■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Igf1rQ60751 1373 aa16.77■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Abca5Q8K448 1642 aa16.77■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Gtf3c3Q3TMP1 882 aa16.77■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Atxn3Q9CVD2 355 aa16.77■□□□□ 0.28
Pdgfra-205ENSMUST00000201711 Rtn4Q99P72 1162 aaKnown RBP16.76■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Map7O88735 730 aa16.76■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Cdk13Q69ZA1 1511 aaKnown RBP16.75■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Cc2d1aQ8K1A6 943 aa16.75■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Eif2s2Q99L45 331 aaKnown RBP16.75■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Q3TQI7 289 aaKnown RBP16.75■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Camsap2Q8C1B1 1461 aa16.75■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 G3bp1P97855 465 aaKnown RBP16.74■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 AI481877A2ALV5 1481 aa16.74■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Trim58Q5NCC9 485 aa16.73■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Adamts12Q811B3 1600 aa16.73■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Gm156Q58A37 223 aa16.73■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 KarsQ99MN1 595 aaKnown RBP16.73■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Sart3Q9JLI8 962 aaKnown RBP16.73■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Mapkbp1Q6NS57 1503 aa16.73■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Ak7Q9D2H2 614 aa16.72■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Tspyl2Q7TQI8 677 aa16.72■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Plekhh1Q80TI1 1356 aa16.72■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Cdk19Q8BWD8 501 aa16.71■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Stk31Q99MW1 1018 aa16.71■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Ccdc146E9Q9F7 977 aa16.71■□□□□ 0.27
Pdgfra-205ENSMUST00000201711 Dusp27Q148W8 1138 aa16.7■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 Kdm6bQ5NCY0 1641 aa16.7■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 Gm21190A0A0G2JGJ6 266 aa16.69■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 KnstrnQ9D9Z1 312 aaKnown RBP16.69■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 Liat1Q810M6 228 aa16.69■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 Rbm25B2RY56 838 aaKnown RBP16.69■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 Cald1E9QA15 768 aaKnown RBP16.69■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 AlkP97793 1621 aa16.68■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 Htatsf1Q8BGC0 757 aa16.68■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 Arhgef12Q8R4H2 1543 aaKnown RBP16.68■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 Hsp90b1P08113 802 aaKnown RBP16.68■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 Rsph4aQ8BYM7 716 aa16.67■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 Ap3b2Q9JME5 1082 aa16.67■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 Usp16Q99LG0 825 aa16.66■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 Dennd4bQ3U1Y4 1499 aa16.66■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 RalgapbQ8BQZ4 1484 aa16.66■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 Arhgef11Q68FM7 1552 aa16.66■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 Abcc1O35379 1528 aa16.65■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 Ylpm1Q9R0I7 1386 aaKnown RBP16.64■□□□□ 0.26
Pdgfra-205ENSMUST00000201711 HnrnpmQ9D0E1 729 aaKnown RBP16.64■□□□□ 0.25
Pdgfra-205ENSMUST00000201711 Chmp4bQ9D8B3 224 aaKnown RBP16.64■□□□□ 0.25
Pdgfra-205ENSMUST00000201711 MpripP97434 1024 aa16.63■□□□□ 0.25
Pdgfra-205ENSMUST00000201711 Naip6Q9JIB6 1403 aa16.63■□□□□ 0.25
Pdgfra-205ENSMUST00000201711 Gcc2Q8CHG3 1679 aa16.62■□□□□ 0.25
Pdgfra-205ENSMUST00000201711 Triml2E9PW10 424 aa16.62■□□□□ 0.25
Pdgfra-205ENSMUST00000201711 Swt1Q9DBQ9 907 aa16.61■□□□□ 0.25
Pdgfra-205ENSMUST00000201711 HnrnpuQ8VEK3 800 aaKnown RBP16.6■□□□□ 0.25
Pdgfra-205ENSMUST00000201711 OvosQ3UU35 1456 aa16.6■□□□□ 0.25
Pdgfra-205ENSMUST00000201711 PalmQ9Z0P4 383 aa16.6■□□□□ 0.25
Pdgfra-205ENSMUST00000201711 Pip4k2bQ80XI4 416 aa16.59■□□□□ 0.25
Pdgfra-205ENSMUST00000201711 Cabp2Q9JLK4 216 aa16.59■□□□□ 0.25
Pdgfra-205ENSMUST00000201711 Abca16E9PWJ7 1678 aa16.59■□□□□ 0.25
Pdgfra-205ENSMUST00000201711 Cavin4A2AMM0 362 aa16.59■□□□□ 0.25
Pdgfra-205ENSMUST00000201711 FanciQ8K368 1330 aa16.58■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Ccdc183A2AJB1 534 aa16.58■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 SphkapQ6NSW3 1687 aa16.58■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 DroshaQ5HZJ0 1373 aaKnown RBP16.58■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Lrriq1Q0P5X1 1673 aa16.57■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 Slc52a2Q9D8F3 450 aa16.57■□□□□ 0.24
Pdgfra-205ENSMUST00000201711 PtprgQ05909 1442 aa16.56■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms