RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 Sept7O55131 436 aa9.23□□□□□ -0.93
Pcdh9-204ENSMUST00000193901 Ubl4bQ9CQ84 188 aa9.23□□□□□ -0.93
Pcdh9-204ENSMUST00000193901 Phldb2Q8K1N2 1249 aa9.23□□□□□ -0.93
Pcdh9-204ENSMUST00000193901 Ccp110Q7TSH4 1004 aa9.23□□□□□ -0.93
Pcdh9-204ENSMUST00000193901 Eif3j1Q3UGC7 261 aaKnown RBP9.22□□□□□ -0.93
Pcdh9-204ENSMUST00000193901 Eif3j2Q66JS6 263 aa9.22□□□□□ -0.93
Pcdh9-204ENSMUST00000193901 MyclP10166 368 aa9.22□□□□□ -0.93
Pcdh9-204ENSMUST00000193901 Nf2P46662 596 aa9.22□□□□□ -0.93
Pcdh9-204ENSMUST00000193901 SltmQ8CH25 1031 aaKnown RBP9.22□□□□□ -0.93
Pcdh9-204ENSMUST00000193901 CenpqQ9CPQ5 267 aa9.22□□□□□ -0.93
Pcdh9-204ENSMUST00000193901 U2af1Q9D883 239 aaKnown RBP9.22□□□□□ -0.93
Pcdh9-204ENSMUST00000193901 Ccdc96Q9CR92 584 aa9.22□□□□□ -0.93
Pcdh9-204ENSMUST00000193901 Dhx16G3X8X0 1044 aaKnown RBP9.22□□□□□ -0.93
Pcdh9-204ENSMUST00000193901 Cfap99A0A140LIX9 648 aa9.21□□□□□ -0.93
Pcdh9-204ENSMUST00000193901 Zfp853A0A1D5RM95 733 aa9.21□□□□□ -0.93
Pcdh9-204ENSMUST00000193901 IqcgQ80W32 419 aa9.21□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Cnksr2Q80YA9 1032 aa9.21□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Golga2Q921M4 999 aa9.21□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Cfap57Q9D180 1249 aa9.21□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Pmfbp1Q9WVQ0 1022 aa9.21□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Trap1aP19473 224 aa9.21□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Zscan21Q07231 555 aa9.21□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Homer1Q9Z2Y3 366 aa9.2□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Acbd3Q8BMP6 525 aa9.2□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Cchcr1Q8K2I2 770 aa9.2□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Mipol1Q9D9F8 279 aa9.2□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Tmf1B9EKI3 1091 aa9.2□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Znf710Q3U288 666 aa9.2□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Skor2A7M7C7 1008 aa9.2□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Slc4a3P16283 1227 aa9.2□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Ppm1fQ8CGA0 452 aa9.2□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Fam13bQ8K2H3 851 aa9.2□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Rrp9Q91WM3 475 aaKnown RBP9.2□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Stk24Q99KH8 431 aa9.2□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Rab11fip3Q8CHD8 1047 aa9.2□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Cep164Q5DU05 1446 aa9.19□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Smc3Q9CW03 1217 aaKnown RBP9.19□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Cetn2Q9R1K9 172 aa9.19□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 AcrbpQ3V140 540 aa9.19□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 IncenpQ9WU62 880 aa9.19□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 IbspQ61711 324 aa9.18□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Ccdc112A0AUP1 442 aa9.18□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 PdcQ9QW08 244 aa9.18□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Kcnj4P52189 445 aa9.18□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Nop14Q8R3N1 860 aaKnown RBP9.18□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Cdr1E9Q0B4 517 aa9.18□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Map2k1P31938 393 aa9.18□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Slc4a10Q5DTL9 1118 aa9.18□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Gigyf2Q6Y7W8 1291 aaKnown RBP9.18□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Ccdc181Q80ZU5 509 aa9.18□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Smc1aQ9CU62 1233 aaKnown RBP9.18□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Gm44503E9PYU5 387 aa9.17□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 CrcpO35427 148 aa9.17□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Dnaaf4Q8R368 420 aa9.17□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 CenphQ9QYM8 241 aa9.17□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Hdgfl1Q2VPR5 283 aa9.17□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Cfap53Q9D439 514 aa9.17□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Mtus2Q3UHD3 1353 aa9.17□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Samd1D3YXK1 519 aa9.17□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Ccdc146E9Q9F7 977 aa9.17□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Cnga1P29974 684 aa9.17□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Setd5Q5XJV7 1441 aa9.16□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Zrsr1Q64707 428 aa9.16□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Gtf2e1Q9D0D5 440 aa9.16□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Gprasp1Q5U4C1 1347 aa9.16□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Hoxa7P02830 229 aa9.16□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 DesP31001 469 aaKnown RBP9.16□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Stim1P70302 685 aa9.16□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 NefhP19246 1090 aa9.16□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 SelenooQ9DBC0 667 aa9.16□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Mia2Q91ZV0 1396 aa9.15□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Hnrnpul1Q8VDM6 859 aaKnown RBP9.15□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Eif3aP23116 1344 aaKnown RBP9.15□□□□□ -0.94
Pcdh9-204ENSMUST00000193901 Mcm3P25206 812 aaKnown RBP9.15□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Bag1Q60739 355 aa9.14□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Slc13a4Q8BZ82 625 aa9.14□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Tango6Q8C3S2 1079 aa9.14□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Tceal9Q9DD24 104 aa9.14□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Rrp7aQ9D1C9 280 aaKnown RBP9.14□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Trim30cD3YVI9 513 aa9.14□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Znf330Q922H9 316 aa9.14□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Hmgb1P63158 215 aaKnown RBP9.13□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Me1P06801 572 aa9.13□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Rsf1E9PWW9 1441 aaKnown RBP9.13□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 4933428M09RikQ9D3X3 192 aa9.13□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Psma5Q9Z2U1 241 aaKnown RBP9.13□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Erc2Q6PH08 957 aa9.13□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Ppp1r9bQ6R891 817 aaKnown RBP9.13□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Tspyl3Q3UYP3 334 aa9.12□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Dydc1Q9D9T0 175 aa9.12□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Ccdc102aQ3TMW1 549 aa9.12□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Pafah1b1P63005 410 aaKnown RBP9.12□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Ksr2Q3UVC0 959 aa9.12□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Nol7Q9D7Z3 254 aaKnown RBP9.12□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 ZfxP17012 799 aa9.12□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Kif16bB1AVY7 1312 aa9.11□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Birc3O08863 600 aa9.11□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 Rsph4aQ8BYM7 716 aa9.11□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 MicalclQ9D5U9 680 aa9.11□□□□□ -0.95
Pcdh9-204ENSMUST00000193901 SlmapQ3URD3 845 aa9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms