RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Kdm2aP59997 1161 aa14.93□□□□□ -0.02
Lig3-212ENSMUST00000173727 Tecpr2Q3UH45 1423 aa14.93□□□□□ -0.02
Lig3-212ENSMUST00000173727 Afap1Q80YS6 731 aa14.92□□□□□ -0.02
Lig3-212ENSMUST00000173727 Ino80Q6ZPV2 1559 aa14.92□□□□□ -0.02
Lig3-212ENSMUST00000173727 Efcab6Q6P1E8 1516 aa14.92□□□□□ -0.02
Lig3-212ENSMUST00000173727 AatkQ80YE4 1365 aa14.92□□□□□ -0.02
Lig3-212ENSMUST00000173727 Os9Q8K2C7 672 aa14.92□□□□□ -0.02
Lig3-212ENSMUST00000173727 Knl1Q66JQ7 1612 aa14.91□□□□□ -0.02
Lig3-212ENSMUST00000173727 Rock2P70336 1388 aa14.91□□□□□ -0.02
Lig3-212ENSMUST00000173727 Fam71e1A1L3C1 212 aa14.9□□□□□ -0.02
Lig3-212ENSMUST00000173727 Zbtb4Q5F293 982 aa14.89□□□□□ -0.03
Lig3-212ENSMUST00000173727 Cep152A2AUM9 1736 aaKnown RBP14.88□□□□□ -0.03
Lig3-212ENSMUST00000173727 Gm20521D3Z5F7 333 aa14.87□□□□□ -0.03
Lig3-212ENSMUST00000173727 Plekhg5Q66T02 1073 aa14.87□□□□□ -0.03
Lig3-212ENSMUST00000173727 Hfm1D3Z4R1 1434 aa14.87□□□□□ -0.03
Lig3-212ENSMUST00000173727 Myom2Q14BI5 1463 aa14.87□□□□□ -0.03
Lig3-212ENSMUST00000173727 Srpk2O54781 681 aaKnown RBP14.87□□□□□ -0.03
Lig3-212ENSMUST00000173727 CltcQ68FD5 1675 aaKnown RBP14.86□□□□□ -0.03
Lig3-212ENSMUST00000173727 Plppr3Q7TPB0 716 aa14.86□□□□□ -0.03
Lig3-212ENSMUST00000173727 Rims1Q99NE5 1463 aa14.86□□□□□ -0.03
Lig3-212ENSMUST00000173727 Skint5A7XUY5 1461 aa14.86□□□□□ -0.03
Lig3-212ENSMUST00000173727 Slc24a1Q91WD8 1130 aa14.85□□□□□ -0.03
Lig3-212ENSMUST00000173727 Smg6P61406 1418 aaKnown RBP14.85□□□□□ -0.03
Lig3-212ENSMUST00000173727 Setd1aE9PYH6 1716 aa14.84□□□□□ -0.03
Lig3-212ENSMUST00000173727 Uggt1Q6P5E4 1551 aa14.84□□□□□ -0.03
Lig3-212ENSMUST00000173727 Dnajc5P60904 198 aa14.84□□□□□ -0.03
Lig3-212ENSMUST00000173727 Dnajc5gQ8C632 165 aa14.84□□□□□ -0.03
Lig3-212ENSMUST00000173727 Myo3aQ8K3H5 1613 aa14.83□□□□□ -0.04
Lig3-212ENSMUST00000173727 Fan1Q69ZT1 1020 aa14.83□□□□□ -0.04
Lig3-212ENSMUST00000173727 Srcin1Q9QWI6 1250 aa14.83□□□□□ -0.04
Lig3-212ENSMUST00000173727 Ahdc1Q6PAL7 1594 aaKnown RBP14.82□□□□□ -0.04
Lig3-212ENSMUST00000173727 Mroh1E0CZ22 1640 aa14.82□□□□□ -0.04
Lig3-212ENSMUST00000173727 DiexfQ8BTT6 772 aaKnown RBP14.82□□□□□ -0.04
Lig3-212ENSMUST00000173727 RictorQ6QI06 1708 aa14.8□□□□□ -0.04
Lig3-212ENSMUST00000173727 Plxnc1Q9QZC2 1574 aa14.8□□□□□ -0.04
Lig3-212ENSMUST00000173727 Arhgap23Q69ZH9 1483 aa14.79□□□□□ -0.04
Lig3-212ENSMUST00000173727 Cdk5rap2Q8K389 1822 aa14.79□□□□□ -0.04
Lig3-212ENSMUST00000173727 AU022751B1B0V2 589 aa14.79□□□□□ -0.04
Lig3-212ENSMUST00000173727 Stard8Q8K031 1019 aa14.78□□□□□ -0.04
Lig3-212ENSMUST00000173727 Safb2Q80YR5 991 aaKnown RBP14.77□□□□□ -0.04
Lig3-212ENSMUST00000173727 Usp40Q8BWR4 1235 aa14.77□□□□□ -0.04
Lig3-212ENSMUST00000173727 Gtf2e1Q9D0D5 440 aa14.77□□□□□ -0.04
Lig3-212ENSMUST00000173727 Prrc2bQ7TPM1 1486 aaKnown RBP14.77□□□□□ -0.05
Lig3-212ENSMUST00000173727 Adamtsl3G3UXC7 1706 aa14.77□□□□□ -0.05
Lig3-212ENSMUST00000173727 Puf60Q3UEB3 564 aaKnown RBP14.77□□□□□ -0.05
Lig3-212ENSMUST00000173727 Gm13695A2AK44 830 aa14.76□□□□□ -0.05
Lig3-212ENSMUST00000173727 Pcdh10E9PXQ7 1057 aa14.75□□□□□ -0.05
Lig3-212ENSMUST00000173727 Atp1b4Q99ME6 356 aa14.74□□□□□ -0.05
Lig3-212ENSMUST00000173727 Pola1P33609 1465 aa14.74□□□□□ -0.05
Lig3-212ENSMUST00000173727 Slc52a2Q9D8F3 450 aa14.74□□□□□ -0.05
Lig3-212ENSMUST00000173727 Nphp4P59240 1425 aa14.74□□□□□ -0.05
Lig3-212ENSMUST00000173727 Kif13aQ9EQW7 1749 aa14.74□□□□□ -0.05
Lig3-212ENSMUST00000173727 Myom1Q62234 1667 aaKnown RBP14.73□□□□□ -0.05
Lig3-212ENSMUST00000173727 PtprmP28828 1452 aa14.72□□□□□ -0.05
Lig3-212ENSMUST00000173727 Bcl11aQ9QYE3 773 aa14.72□□□□□ -0.05
Lig3-212ENSMUST00000173727 Sipa1l1Q8C0T5 1782 aa14.72□□□□□ -0.05
Lig3-212ENSMUST00000173727 Stra8P70278 393 aa14.71□□□□□ -0.05
Lig3-212ENSMUST00000173727 Itsn2Q9Z0R6 1659 aa14.71□□□□□ -0.05
Lig3-212ENSMUST00000173727 Naip7Q9JIB3 1402 aa14.71□□□□□ -0.05
Lig3-212ENSMUST00000173727 Ercc6l2Q9JIM3 1537 aa14.71□□□□□ -0.05
Lig3-212ENSMUST00000173727 Itsn1Q9Z0R4 1714 aa14.71□□□□□ -0.06
Lig3-212ENSMUST00000173727 DnmbpQ6TXD4 1580 aa14.7□□□□□ -0.06
Lig3-212ENSMUST00000173727 Lrrc7Q80TE7 1490 aa14.7□□□□□ -0.06
Lig3-212ENSMUST00000173727 Tnnt3Q9QZ47 272 aa14.7□□□□□ -0.06
Lig3-212ENSMUST00000173727 IqubQ8CDK3 788 aa14.69□□□□□ -0.06
Lig3-212ENSMUST00000173727 P3h3Q8CG70 732 aa14.69□□□□□ -0.06
Lig3-212ENSMUST00000173727 Stag3O70576 1240 aa14.69□□□□□ -0.06
Lig3-212ENSMUST00000173727 Shq1Q7TMX5 569 aa14.69□□□□□ -0.06
Lig3-212ENSMUST00000173727 Tubgcp6G5E8P0 1769 aa14.69□□□□□ -0.06
Lig3-212ENSMUST00000173727 Med14A2ABV5 1459 aaKnown RBP14.68□□□□□ -0.06
Lig3-212ENSMUST00000173727 Wwc2Q6NXJ0 1187 aa14.68□□□□□ -0.06
Lig3-212ENSMUST00000173727 PrxO55103 1391 aa14.68□□□□□ -0.06
Lig3-212ENSMUST00000173727 Mrs2Q5NCE8 434 aa14.68□□□□□ -0.06
Lig3-212ENSMUST00000173727 Pank3Q8R2W9 370 aa14.68□□□□□ -0.06
Lig3-212ENSMUST00000173727 PalldQ9ET54 1408 aa14.68□□□□□ -0.06
Lig3-212ENSMUST00000173727 Exoc6Q8R313 802 aa14.68□□□□□ -0.06
Lig3-212ENSMUST00000173727 Sbno1Q689Z5 1390 aa14.67□□□□□ -0.06
Lig3-212ENSMUST00000173727 Tmf1B9EKI3 1091 aa14.67□□□□□ -0.06
Lig3-212ENSMUST00000173727 Slc4a1apE9PX68 744 aa14.66□□□□□ -0.06
Lig3-212ENSMUST00000173727 Stk26Q99JT2 416 aa14.65□□□□□ -0.06
Lig3-212ENSMUST00000173727 Inpp5dQ9ES52 1191 aa14.65□□□□□ -0.06
Lig3-212ENSMUST00000173727 Arid4bA2CG63 1314 aaKnown RBP14.64□□□□□ -0.07
Lig3-212ENSMUST00000173727 Zc3h13E9Q784 1729 aaKnown RBP14.64□□□□□ -0.07
Lig3-212ENSMUST00000173727 Q9D9H8 365 aa14.64□□□□□ -0.07
Lig3-212ENSMUST00000173727 Arhgef28P97433 1693 aa14.64□□□□□ -0.07
Lig3-212ENSMUST00000173727 Ift172Q6VH22 1749 aa14.63□□□□□ -0.07
Lig3-212ENSMUST00000173727 Txndc2Q6P902 515 aa14.63□□□□□ -0.07
Lig3-212ENSMUST00000173727 NrdcQ8BHG1 1161 aa14.63□□□□□ -0.07
Lig3-212ENSMUST00000173727 Fam184bQ0KK56 942 aa14.62□□□□□ -0.07
Lig3-212ENSMUST00000173727 Anp32bQ9EST5 272 aaKnown RBP14.62□□□□□ -0.07
Lig3-212ENSMUST00000173727 Zscan10Q3URR7 782 aa14.62□□□□□ -0.07
Lig3-212ENSMUST00000173727 Psme1P97371 249 aa14.61□□□□□ -0.07
Lig3-212ENSMUST00000173727 Kdm5aQ3UXZ9 1690 aa14.6□□□□□ -0.07
Lig3-212ENSMUST00000173727 CenpjQ569L8 1344 aa14.6□□□□□ -0.07
Lig3-212ENSMUST00000173727 PplQ9R269 1755 aa14.6□□□□□ -0.07
Lig3-212ENSMUST00000173727 Eif2ak4Q9QZ05 1648 aa14.6□□□□□ -0.07
Lig3-212ENSMUST00000173727 Chd2E9PZM4 1827 aaKnown RBP14.6□□□□□ -0.07
Lig3-212ENSMUST00000173727 PnisrA2AJT4 805 aaKnown RBP14.6□□□□□ -0.07
Lig3-212ENSMUST00000173727 Utp14aQ640M1 767 aaKnown RBP14.59□□□□□ -0.07
Lig3-212ENSMUST00000173727 Gm16486A0A1D5RMD1 1434 aa14.58□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms