RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Kidins220E9Q9B7 1793 aa8.43□□□□□ -1.06
Lig4-202ENSMUST00000170033 Stag3O70576 1240 aa8.43□□□□□ -1.06
Lig4-202ENSMUST00000170033 ShprhQ7TPQ3 1674 aa8.42□□□□□ -1.06
Lig4-202ENSMUST00000170033 Plch2A2AP18 1501 aa8.42□□□□□ -1.06
Lig4-202ENSMUST00000170033 AI481877A2ALV5 1481 aa8.42□□□□□ -1.06
Lig4-202ENSMUST00000170033 Gpatch11Q3UFS4 262 aa8.42□□□□□ -1.06
Lig4-202ENSMUST00000170033 Itsn2Q9Z0R6 1659 aa8.42□□□□□ -1.06
Lig4-202ENSMUST00000170033 Clasp1Q80TV8 1535 aaKnown RBP8.42□□□□□ -1.06
Lig4-202ENSMUST00000170033 Pola1P33609 1465 aa8.42□□□□□ -1.06
Lig4-202ENSMUST00000170033 Zfyve16Q80U44 1528 aa8.42□□□□□ -1.06
Lig4-202ENSMUST00000170033 Dhx9O70133 1380 aaKnown RBP8.41□□□□□ -1.06
Lig4-202ENSMUST00000170033 Sin3aQ60520 1274 aaKnown RBP8.41□□□□□ -1.06
Lig4-202ENSMUST00000170033 Zfp644E9QA22 1323 aa8.41□□□□□ -1.06
Lig4-202ENSMUST00000170033 Abcc1O35379 1528 aa8.41□□□□□ -1.06
Lig4-202ENSMUST00000170033 Map4P27546 1125 aaKnown RBP8.4□□□□□ -1.06
Lig4-202ENSMUST00000170033 Pak3Q61036 559 aa8.4□□□□□ -1.06
Lig4-202ENSMUST00000170033 Akap12Q9WTQ5 1684 aa8.4□□□□□ -1.06
Lig4-202ENSMUST00000170033 Cd109Q8R422 1442 aa8.4□□□□□ -1.07
Lig4-202ENSMUST00000170033 Ttc41Q692V3 1318 aa8.39□□□□□ -1.07
Lig4-202ENSMUST00000170033 Card11Q8CIS0 1159 aa8.39□□□□□ -1.07
Lig4-202ENSMUST00000170033 Trpm1Q2TV84 1622 aa8.39□□□□□ -1.07
Lig4-202ENSMUST00000170033 Atp7aQ64430 1491 aa8.39□□□□□ -1.07
Lig4-202ENSMUST00000170033 Xrn1P97789 1719 aaKnown RBP8.39□□□□□ -1.07
Lig4-202ENSMUST00000170033 Tarbp1E9Q368 1579 aa8.39□□□□□ -1.07
Lig4-202ENSMUST00000170033 Depdc5P61460 1591 aa8.39□□□□□ -1.07
Lig4-202ENSMUST00000170033 Tmem131lQ3U3D7 1597 aa8.39□□□□□ -1.07
Lig4-202ENSMUST00000170033 Anp32bQ9EST5 272 aaKnown RBP8.38□□□□□ -1.07
Lig4-202ENSMUST00000170033 Slc4a2P13808 1237 aaKnown RBP8.38□□□□□ -1.07
Lig4-202ENSMUST00000170033 Rundc1Q0VDN7 615 aa8.38□□□□□ -1.07
Lig4-202ENSMUST00000170033 Usp54Q8BL06 1588 aaKnown RBP8.38□□□□□ -1.07
Lig4-202ENSMUST00000170033 Adamts13Q769J6 1426 aa8.37□□□□□ -1.07
Lig4-202ENSMUST00000170033 Zmym3Q9JLM4 1370 aa8.37□□□□□ -1.07
Lig4-202ENSMUST00000170033 Trak1Q6PD31 939 aa8.37□□□□□ -1.07
Lig4-202ENSMUST00000170033 Prdm2A2A7B5 1709 aaKnown RBP8.37□□□□□ -1.07
Lig4-202ENSMUST00000170033 Fndc1E9Q043 1732 aa8.37□□□□□ -1.07
Lig4-202ENSMUST00000170033 Ylpm1Q9R0I7 1386 aaKnown RBP8.37□□□□□ -1.07
Lig4-202ENSMUST00000170033 Mrs2Q5NCE8 434 aa8.37□□□□□ -1.07
Lig4-202ENSMUST00000170033 Stard8Q8K031 1019 aa8.37□□□□□ -1.07
Lig4-202ENSMUST00000170033 Sipa1l1Q8C0T5 1782 aa8.36□□□□□ -1.07
Lig4-202ENSMUST00000170033 Topbp1Q6ZQF0 1515 aa8.36□□□□□ -1.07
Lig4-202ENSMUST00000170033 Abca8aQ8K442 1620 aa8.36□□□□□ -1.07
Lig4-202ENSMUST00000170033 Kank1E9Q238 1360 aa8.35□□□□□ -1.07
Lig4-202ENSMUST00000170033 TnikP83510 1323 aa8.35□□□□□ -1.07
Lig4-202ENSMUST00000170033 DnmbpQ6TXD4 1580 aa8.35□□□□□ -1.07
Lig4-202ENSMUST00000170033 Trappc8E9PWG2 1437 aa8.35□□□□□ -1.07
Lig4-202ENSMUST00000170033 Edc4Q3UJB9 1406 aaKnown RBP8.35□□□□□ -1.07
Lig4-202ENSMUST00000170033 Zcwpw1Q6IR42 630 aa8.35□□□□□ -1.07
Lig4-202ENSMUST00000170033 Exoc6Q8R313 802 aa8.35□□□□□ -1.07
Lig4-202ENSMUST00000170033 Ehbp1l1Q99MS7 1716 aa8.35□□□□□ -1.07
Lig4-202ENSMUST00000170033 Tulp4Q9JIL5 1547 aa8.35□□□□□ -1.07
Lig4-202ENSMUST00000170033 Tex14Q7M6U3 1450 aa8.34□□□□□ -1.07
Lig4-202ENSMUST00000170033 Iqgap3F8VQ29 1632 aa8.34□□□□□ -1.07
Lig4-202ENSMUST00000170033 Atp10dQ8K2X1 1416 aa8.34□□□□□ -1.07
Lig4-202ENSMUST00000170033 Nos1Q9Z0J4 1429 aa8.34□□□□□ -1.07
Lig4-202ENSMUST00000170033 BbxQ8VBW5 907 aa8.34□□□□□ -1.07
Lig4-202ENSMUST00000170033 Kiaa0556Q8C753 1610 aa8.34□□□□□ -1.07
Lig4-202ENSMUST00000170033 Atf7ipQ7TT18 1306 aa8.33□□□□□ -1.08
Lig4-202ENSMUST00000170033 Kdm5aQ3UXZ9 1690 aa8.33□□□□□ -1.08
Lig4-202ENSMUST00000170033 DaxxO35613 739 aa8.33□□□□□ -1.08
Lig4-202ENSMUST00000170033 Rangap1P46061 589 aaKnown RBP8.33□□□□□ -1.08
Lig4-202ENSMUST00000170033 AknaQ80VW7 1404 aa8.33□□□□□ -1.08
Lig4-202ENSMUST00000170033 Znf518aB2RRF6 1478 aaKnown RBP8.33□□□□□ -1.08
Lig4-202ENSMUST00000170033 Sh3bp1P55194 680 aa8.33□□□□□ -1.08
Lig4-202ENSMUST00000170033 Dnajc5bQ9CQ94 199 aa8.33□□□□□ -1.08
Lig4-202ENSMUST00000170033 Tecpr2Q3UH45 1423 aa8.33□□□□□ -1.08
Lig4-202ENSMUST00000170033 Efcab6Q6P1E8 1516 aa8.33□□□□□ -1.08
Lig4-202ENSMUST00000170033 Arid4aF8VPQ2 1261 aaKnown RBP8.32□□□□□ -1.08
Lig4-202ENSMUST00000170033 Spag9Q58A65 1321 aaKnown RBP8.32□□□□□ -1.08
Lig4-202ENSMUST00000170033 B4galnt3Q6L8S8 986 aa8.32□□□□□ -1.08
Lig4-202ENSMUST00000170033 Plcd3Q8K2J0 785 aa8.32□□□□□ -1.08
Lig4-202ENSMUST00000170033 DmtnQ9WV69 405 aa8.32□□□□□ -1.08
Lig4-202ENSMUST00000170033 Myom2Q14BI5 1463 aa8.32□□□□□ -1.08
Lig4-202ENSMUST00000170033 Rgl3Q3UYI5 709 aa8.32□□□□□ -1.08
Lig4-202ENSMUST00000170033 Ccdc27Q3V036 639 aa8.32□□□□□ -1.08
Lig4-202ENSMUST00000170033 IbspQ61711 324 aa8.32□□□□□ -1.08
Lig4-202ENSMUST00000170033 Mbd3Q9Z2D8 285 aaKnown RBP8.32□□□□□ -1.08
Lig4-202ENSMUST00000170033 Abca9Q8K449 1623 aa8.32□□□□□ -1.08
Lig4-202ENSMUST00000170033 Eif2ak4Q9QZ05 1648 aa8.32□□□□□ -1.08
Lig4-202ENSMUST00000170033 Wdr43Q6ZQL4 677 aaKnown RBP8.32□□□□□ -1.08
Lig4-202ENSMUST00000170033 Uggt1Q6P5E4 1551 aa8.31□□□□□ -1.08
Lig4-202ENSMUST00000170033 Adgrl3Q80TS3 1537 aa8.31□□□□□ -1.08
Lig4-202ENSMUST00000170033 Abcc6Q9R1S7 1498 aa8.31□□□□□ -1.08
Lig4-202ENSMUST00000170033 Cdk5rap2Q8K389 1822 aa8.31□□□□□ -1.08
Lig4-202ENSMUST00000170033 Ift172Q6VH22 1749 aa8.31□□□□□ -1.08
Lig4-202ENSMUST00000170033 Egfem1Q8C088 590 aa8.31□□□□□ -1.08
Lig4-202ENSMUST00000170033 Sart1Q9Z315 806 aaKnown RBP8.31□□□□□ -1.08
Lig4-202ENSMUST00000170033 Plxnc1Q9QZC2 1574 aa8.31□□□□□ -1.08
Lig4-202ENSMUST00000170033 Rims1Q99NE5 1463 aa8.31□□□□□ -1.08
Lig4-202ENSMUST00000170033 Irf5P56477 497 aa8.3□□□□□ -1.08
Lig4-202ENSMUST00000170033 Atp10aO54827 1508 aa8.3□□□□□ -1.08
Lig4-202ENSMUST00000170033 Cdc42bpgQ80UW5 1551 aa8.3□□□□□ -1.08
Lig4-202ENSMUST00000170033 KdrP35918 1367 aa8.3□□□□□ -1.08
Lig4-202ENSMUST00000170033 Zscan21Q07231 555 aa8.29□□□□□ -1.08
Lig4-202ENSMUST00000170033 AglF8VPN4 1532 aa8.29□□□□□ -1.08
Lig4-202ENSMUST00000170033 Adamts7Q68SA9 1657 aa8.29□□□□□ -1.08
Lig4-202ENSMUST00000170033 Ccdc96Q9CR92 584 aa8.28□□□□□ -1.08
Lig4-202ENSMUST00000170033 Adgrb3Q80ZF8 1522 aa8.28□□□□□ -1.08
Lig4-202ENSMUST00000170033 Ino80Q6ZPV2 1559 aa8.28□□□□□ -1.08
Lig4-202ENSMUST00000170033 Gm16486A0A1D5RMD1 1434 aa8.28□□□□□ -1.08
Lig4-202ENSMUST00000170033 Wwc2Q6NXJ0 1187 aa8.28□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms