RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Rapgef6Q5NCJ1 1609 aa14.79□□□□□ -0.04
Prpf40b-208ENSMUST00000136980 Gas2l2Q5SSG4 860 aa14.79□□□□□ -0.04
Prpf40b-208ENSMUST00000136980 Smc5Q8CG46 1101 aaKnown RBP14.78□□□□□ -0.04
Prpf40b-208ENSMUST00000136980 Erich6D3Z6S9 713 aa14.78□□□□□ -0.04
Prpf40b-208ENSMUST00000136980 Abcc2Q8VI47 1543 aa14.78□□□□□ -0.04
Prpf40b-208ENSMUST00000136980 Cpsf1Q9EPU4 1441 aaKnown RBP14.78□□□□□ -0.04
Prpf40b-208ENSMUST00000136980 Mbd3Q9Z2D8 285 aaKnown RBP14.77□□□□□ -0.04
Prpf40b-208ENSMUST00000136980 Asxl1P59598 1514 aa14.77□□□□□ -0.04
Prpf40b-208ENSMUST00000136980 IbspQ61711 324 aa14.77□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Stard8Q8K031 1019 aa14.76□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Pank1Q8K4K6 548 aa14.76□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Tmf1B9EKI3 1091 aa14.76□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Ipo8Q7TMY7 1010 aa14.76□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Polr3glQ8R0C0 218 aa14.75□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Arhgef11Q68FM7 1552 aa14.75□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Cdc42bpaQ3UU96 1719 aa14.74□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Ccdc30Q8BVF4 654 aa14.74□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Kdm5cP41230 1554 aa14.74□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 AcrbpQ3V140 540 aa14.74□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Nlrp6Q91WS2 869 aa14.74□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Chmp4bQ9D8B3 224 aaKnown RBP14.74□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Trim26Q99PN3 545 aa14.74□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Dot1lQ6XZL8 1540 aa14.73□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Plekhh1Q80TI1 1356 aa14.72□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Ccdc183A2AJB1 534 aa14.72□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Prex2Q3LAC4 1598 aa14.72□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Os9Q8K2C7 672 aa14.71□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Tarbp1E9Q368 1579 aa14.71□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Fam43aQ8BUP8 424 aa14.71□□□□□ -0.05
Prpf40b-208ENSMUST00000136980 Dnmt1P13864 1620 aaKnown RBP14.71□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Rangap1P46061 589 aaKnown RBP14.7□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 KarsQ99MN1 595 aaKnown RBP14.7□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Ccdc141E9Q8Q6 1531 aa14.69□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Cd109Q8R422 1442 aa14.69□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Kiaa1551Q5DTW7 1521 aa14.69□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Trpm2Q91YD4 1506 aa14.69□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Atp7aQ64430 1491 aa14.68□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Magi1Q6RHR9 1471 aa14.68□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Fam184bQ0KK56 942 aa14.68□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Ppp1r9bQ6R891 817 aaKnown RBP14.68□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Srcin1Q9QWI6 1250 aa14.68□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Rlbp1Q9Z275 317 aa14.68□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Tex14Q7M6U3 1450 aa14.68□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Plch2A2AP18 1501 aa14.67□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Shroom2A2ALU4 1481 aa14.67□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Cnga1P29974 684 aa14.67□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Dusp27Q148W8 1138 aa14.67□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Pdlim2Q8R1G6 349 aa14.67□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Ssh2Q5SW75 1423 aa14.67□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Pnmal2G3X9N3 661 aa14.66□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Arid4bA2CG63 1314 aaKnown RBP14.66□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Kif7B7ZNG0 1348 aa14.66□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Mapk8ip3Q9ESN9 1337 aa14.66□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Atxn3Q9CVD2 355 aa14.66□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Iqgap1Q9JKF1 1657 aaKnown RBP14.66□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Tubgcp6G5E8P0 1769 aa14.66□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Rab3gap2Q8BMG7 1366 aa14.65□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Sall3Q62255 1320 aa14.65□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Fam163aQ8CAA5 168 aa14.65□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 Sart1Q9Z315 806 aaKnown RBP14.65□□□□□ -0.06
Prpf40b-208ENSMUST00000136980 DroshaQ5HZJ0 1373 aaKnown RBP14.64□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Gapvd1Q6PAR5 1458 aa14.64□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Golga2Q921M4 999 aa14.64□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Zcchc11B2RX14 1644 aaKnown RBP14.64□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Tnpo1Q8BFY9 898 aaKnown RBP14.63□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Clstn2Q9ER65 966 aa14.63□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 PtprgQ05909 1442 aa14.63□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Ecm2Q5FW85 670 aa14.63□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Cluap1Q8R3P7 413 aa14.63□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Fgd6Q69ZL1 1399 aa14.63□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Ttc41Q692V3 1318 aa14.62□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Duxf3A0A0N4SV92 674 aa14.62□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Usp19Q3UJD6 1360 aa14.61□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Sox12Q04890 314 aa14.61□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 4933402E13RikQ9D4D2 429 aa14.61□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Mroh2aD3Z750 1679 aa14.6□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Cul9Q80TT8 1865 aa14.6□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Chd1P40201 1711 aa14.6□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 AknaQ80VW7 1404 aa14.59□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Htatsf1Q8BGC0 757 aa14.59□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Trappc8E9PWG2 1437 aa14.59□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Mapkbp1Q6NS57 1503 aa14.59□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Nom1Q3UFM5 854 aaKnown RBP14.58□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Gm16486A0A1D5RMD1 1434 aa14.58□□□□□ -0.07
Prpf40b-208ENSMUST00000136980 Tex2Q6ZPJ0 1128 aaKnown RBP14.58□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Brd2Q7JJ13 798 aaKnown RBP14.58□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Ppp1r3fQ9JIG4 799 aa14.58□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Mlh3A0A1Y7VMP7 1443 aa14.57□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 BbxQ8VBW5 907 aa14.57□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Gm20521D3Z5F7 333 aa14.57□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Sptbn5F6UCX4 1208 aa14.57□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Mfap1aC0HKD8 439 aaKnown RBP14.56□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Mfap1bC0HKD9 439 aaKnown RBP14.56□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Neo1P97798 1493 aa14.56□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Lrrc9Q8CDN9 1456 aa14.56□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Pde4cQ3UEI1 686 aa14.56□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Adamts13Q769J6 1426 aa14.55□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Setd1aE9PYH6 1716 aa14.55□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Plcd3Q8K2J0 785 aa14.54□□□□□ -0.08
Prpf40b-208ENSMUST00000136980 Fan1Q69ZT1 1020 aa14.53□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms