RNA–Protein interactions for RNA: ENSMUST00000117548.1

Hmgb1-ps2-201, mousemouse

BASIC

Gene Hmgb1-ps2, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps2-201ENSMUST00000117548 Cfap70D3YVL2 1141 aa7.29□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Ogfod1Q3U0K8 545 aa7.29□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 MetrnQ8C1Q4 291 aa7.29□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Nrg2P56974 756 aa7.28□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Clcn1Q64347 994 aa7.28□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Dpp8Q80YA7 892 aa7.28□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Fmr1nbQ80ZA7 238 aa7.28□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Arid5bQ8BM75 1188 aaKnown RBP7.28□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Trim32Q8CH72 655 aa7.28□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Kcnc4Q8R1C0 628 aa7.28□□□□□ -1.24
Hmgb1-ps2-201ENSMUST00000117548 Gm10563F6WIE4 79 aa7.27□□□□□ -1.25
Hmgb1-ps2-201ENSMUST00000117548 Map2k7Q8CE90 535 aa7.27□□□□□ -1.25
Hmgb1-ps2-201ENSMUST00000117548 Tpcn1Q9EQJ0 817 aa7.27□□□□□ -1.25
Hmgb1-ps2-201ENSMUST00000117548 Nr1h3Q9Z0Y9 445 aa7.27□□□□□ -1.25
Hmgb1-ps2-201ENSMUST00000117548 Zfp943Q6NZP4 507 aa7.26□□□□□ -1.25
Hmgb1-ps2-201ENSMUST00000117548 Tbc1d2bQ3U0J8 965 aa7.25□□□□□ -1.25
Hmgb1-ps2-201ENSMUST00000117548 Zc3h4Q6ZPZ3 1304 aaKnown RBP7.25□□□□□ -1.25
Hmgb1-ps2-201ENSMUST00000117548 Atp2b4Q6Q477 1205 aa7.24□□□□□ -1.25
Hmgb1-ps2-201ENSMUST00000117548 Tie1Q06806 1134 aa7.23□□□□□ -1.25
Hmgb1-ps2-201ENSMUST00000117548 Slc27a5Q4LDG0 689 aa7.23□□□□□ -1.25
Hmgb1-ps2-201ENSMUST00000117548 Rbm26Q6NZN0 1012 aaKnown RBP7.23□□□□□ -1.25
Hmgb1-ps2-201ENSMUST00000117548 Adnp2Q8CHC8 1165 aaKnown RBP7.23□□□□□ -1.25
Hmgb1-ps2-201ENSMUST00000117548 Rtn1Q8K0T0 780 aa7.22□□□□□ -1.25
Hmgb1-ps2-201ENSMUST00000117548 Gtf3c3Q3TMP1 882 aa7.21□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Scnn1aQ61180 699 aa7.21□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 MypopQ8R4U1 393 aa7.21□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Caskin2Q8VHK1 1201 aa7.2□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Tigd5Q499M4 642 aa7.19□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Fam160a1Q505K2 1081 aa7.19□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Nr6a1Q64249 495 aa7.19□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Mrgprb8Q7TN51 330 aa7.19□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Ctdspl2Q8BG15 465 aa7.19□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Ncbp3Q8BZR9 615 aaKnown RBP7.19□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Cabp4Q8VHC5 271 aa7.19□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Plpp7Q91WB2 271 aa7.19□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Pcdhb3Q91XZ7 784 aa7.19□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Gtf2ird1Q9JI57 1104 aaKnown RBP7.19□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Kdm2bQ6P1G2 1309 aa7.19□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 FkbplO35450 347 aa7.18□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Pbx2O35984 430 aa7.18□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 FanccP50652 591 aa7.18□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Trak1Q6PD31 939 aa7.18□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Fbxo3Q9DC63 480 aa7.18□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Mtmr1Q9Z2C4 669 aa7.18□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 DgkhD3YXJ0 1156 aa7.17□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Dph2Q9CR25 489 aa7.17□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Pou3f3P31361 497 aa7.16□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Kcna1P16388 495 aa7.15□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Nos2P29477 1144 aa7.15□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Ptk2P34152 1090 aa7.15□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 MafbP54841 323 aa7.15□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Washc4Q3UMB9 1173 aa7.15□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Pnma5Q5DTT8 618 aa7.15□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 AdarQ99MU3 1178 aaKnown RBP7.15□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Znf354bQ9QXT9 601 aa7.15□□□□□ -1.26
Hmgb1-ps2-201ENSMUST00000117548 Mdm2P23804 489 aa7.14□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Rnf40Q3U319 1001 aa7.14□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 St18Q80TY4 1045 aa7.14□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Ms4a4cQ9D3F6 226 aa7.14□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Fut2Q9JL27 347 aa7.14□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Catsper2A2ARP9 588 aa7.13□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Atp6v1aP50516 617 aaKnown RBP7.13□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Hhipl2Q9D2G9 717 aa7.13□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Gm11939A2A592 99 aa7.12□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Mfap1aC0HKD8 439 aaKnown RBP7.12□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Mfap1bC0HKD9 439 aaKnown RBP7.12□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Brd1E9PZ26 1189 aaKnown RBP7.12□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Hsd3b3P26150 373 aa7.12□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Nek1P51954 1203 aa7.12□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Foxj1Q61660 421 aa7.12□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Fhod1Q6P9Q4 1197 aa7.12□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Rint1Q8BZ36 792 aa7.12□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Cog6Q8R3I3 657 aa7.12□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Dcbld2Q91ZV3 769 aa7.12□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Mkrn1Q9QXP6 481 aa7.12□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Lemd3Q9WU40 921 aa7.12□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Ankrd34aB2RW11 495 aa7.11□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Ccr5P51682 354 aa7.11□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Mcm6P97311 821 aa7.11□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Ccdc85aQ5SP85 500 aa7.11□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 ErfeQ6PGN1 340 aa7.11□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Dbn1Q9QXS6 706 aa7.11□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Kcnn2P58390 839 aa7.1□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Scube3Q66PY1 993 aa7.1□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 TbcelQ8C5W3 424 aa7.1□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Emid1Q91VF5 444 aa7.1□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Thap11Q9JJD0 305 aa7.1□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 ZfrO88532 1074 aaKnown RBP7.09□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Zpr1Q62384 459 aa7.09□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Eif4g2Q62448 906 aaKnown RBP7.09□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Map10Q8BJS7 891 aa7.09□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Eva1bQ8K2Y3 164 aa7.09□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Prpf40aQ9R1C7 953 aaKnown RBP7.09□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Hdac6Q9Z2V5 1149 aa7.09□□□□□ -1.27
Hmgb1-ps2-201ENSMUST00000117548 Erbb3Q61526 1339 aa7.08□□□□□ -1.28
Hmgb1-ps2-201ENSMUST00000117548 Gm21698A0A087WQP8 267 aa7.08□□□□□ -1.28
Hmgb1-ps2-201ENSMUST00000117548 PtpreP49446 699 aa7.08□□□□□ -1.28
Hmgb1-ps2-201ENSMUST00000117548 Slc10a4Q3UEZ8 437 aa7.08□□□□□ -1.28
Hmgb1-ps2-201ENSMUST00000117548 Brd2Q7JJ13 798 aaKnown RBP7.08□□□□□ -1.28
Hmgb1-ps2-201ENSMUST00000117548 SympkQ80X82 1284 aa7.08□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms