RNA–Protein interactions for RNA: ENSMUST00000112874.3

Nck1-201, Transcript of Cytoplasmic protein NCK1, mousemouse

TSL 1 (best) BASIC

Gene Nck1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-201ENSMUST00000112874 OsbpQ3B7Z2 805 aa8.62□□□□□ -1.03
Nck1-201ENSMUST00000112874 Tmtc2Q56A06 836 aa8.62□□□□□ -1.03
Nck1-201ENSMUST00000112874 Gm10093D3YYI8 482 aa8.61□□□□□ -1.03
Nck1-201ENSMUST00000112874 Hdac1O09106 482 aaKnown RBP8.61□□□□□ -1.03
Nck1-201ENSMUST00000112874 Wdhd1P59328 1117 aa8.61□□□□□ -1.03
Nck1-201ENSMUST00000112874 Slc7a3P70423 618 aa8.61□□□□□ -1.03
Nck1-201ENSMUST00000112874 Kcnv2Q8CFS6 562 aa8.61□□□□□ -1.03
Nck1-201ENSMUST00000112874 Rmi1Q9D4G9 616 aa8.61□□□□□ -1.03
Nck1-201ENSMUST00000112874 Tulp1Q9Z273 543 aa8.61□□□□□ -1.03
Nck1-201ENSMUST00000112874 Erich4Q3UNU4 136 aa8.6□□□□□ -1.03
Nck1-201ENSMUST00000112874 Ccdc38Q8CDN8 563 aa8.6□□□□□ -1.03
Nck1-201ENSMUST00000112874 Hnrnpul2Q00PI9 745 aaKnown RBP8.59□□□□□ -1.03
Nck1-201ENSMUST00000112874 Lmod2Q3UHZ5 550 aa8.59□□□□□ -1.03
Nck1-201ENSMUST00000112874 Gpbp1l1Q6NZP2 473 aa8.59□□□□□ -1.03
Nck1-201ENSMUST00000112874 Spock2Q9ER58 423 aa8.59□□□□□ -1.03
Nck1-201ENSMUST00000112874 Tagap1P0CAX8 505 aa8.59□□□□□ -1.03
Nck1-201ENSMUST00000112874 Pax3P24610 479 aa8.59□□□□□ -1.03
Nck1-201ENSMUST00000112874 Evc2Q8K1G2 1220 aa8.59□□□□□ -1.03
Nck1-201ENSMUST00000112874 Znf330Q922H9 316 aa8.59□□□□□ -1.03
Nck1-201ENSMUST00000112874 Sirt1Q923E4 737 aa8.59□□□□□ -1.03
Nck1-201ENSMUST00000112874 Map7d2A2AG50 781 aa8.58□□□□□ -1.04
Nck1-201ENSMUST00000112874 Pmm1O35621 262 aa8.58□□□□□ -1.04
Nck1-201ENSMUST00000112874 Otud6bQ8K2H2 294 aa8.58□□□□□ -1.04
Nck1-201ENSMUST00000112874 Trim30cD3YVI9 513 aa8.57□□□□□ -1.04
Nck1-201ENSMUST00000112874 Kcna1P16388 495 aa8.57□□□□□ -1.04
Nck1-201ENSMUST00000112874 Gabpb2P81069 414 aa8.57□□□□□ -1.04
Nck1-201ENSMUST00000112874 Ric3Q8BPM6 367 aa8.57□□□□□ -1.04
Nck1-201ENSMUST00000112874 Cluap1Q8R3P7 413 aa8.57□□□□□ -1.04
Nck1-201ENSMUST00000112874 Zranb2Q9R020 330 aaKnown RBP8.57□□□□□ -1.04
Nck1-201ENSMUST00000112874 MycnP03966 462 aaKnown RBP8.56□□□□□ -1.04
Nck1-201ENSMUST00000112874 Lemd3Q9WU40 921 aa8.56□□□□□ -1.04
Nck1-201ENSMUST00000112874 1700018F24RikB2RW27 314 aa8.55□□□□□ -1.04
Nck1-201ENSMUST00000112874 Scp2P32020 547 aaKnown RBP8.55□□□□□ -1.04
Nck1-201ENSMUST00000112874 Dixdc1Q80Y83 711 aa8.55□□□□□ -1.04
Nck1-201ENSMUST00000112874 Rps6kc1Q8BLK9 1056 aa8.55□□□□□ -1.04
Nck1-201ENSMUST00000112874 Slc24a3Q99PD7 645 aa8.55□□□□□ -1.04
Nck1-201ENSMUST00000112874 Bcl2l13P59017 434 aa8.54□□□□□ -1.04
Nck1-201ENSMUST00000112874 Psen1P49769 467 aa8.54□□□□□ -1.04
Nck1-201ENSMUST00000112874 Ccdc27Q3V036 639 aa8.54□□□□□ -1.04
Nck1-201ENSMUST00000112874 Sra1Q80VJ2 232 aa8.54□□□□□ -1.04
Nck1-201ENSMUST00000112874 PdiltQ9DAN1 588 aa8.54□□□□□ -1.04
Nck1-201ENSMUST00000112874 Armc3A2AU72 881 aa8.53□□□□□ -1.04
Nck1-201ENSMUST00000112874 Krtap4-2B1AQ85 167 aa8.53□□□□□ -1.04
Nck1-201ENSMUST00000112874 Rbm26Q6NZN0 1012 aaKnown RBP8.53□□□□□ -1.04
Nck1-201ENSMUST00000112874 Fkbp15Q6P9Q6 1216 aaKnown RBP8.53□□□□□ -1.04
Nck1-201ENSMUST00000112874 Ccdc181Q80ZU5 509 aa8.53□□□□□ -1.04
Nck1-201ENSMUST00000112874 Tcerg1Q8CGF7 1100 aaKnown RBP8.53□□□□□ -1.04
Nck1-201ENSMUST00000112874 CrebzfQ91ZR3 358 aa8.53□□□□□ -1.04
Nck1-201ENSMUST00000112874 NbnQ9R207 751 aa8.53□□□□□ -1.04
Nck1-201ENSMUST00000112874 Gm36176A0A1W2P8D5 158 aa8.52□□□□□ -1.05
Nck1-201ENSMUST00000112874 Rrm1P07742 792 aa8.52□□□□□ -1.05
Nck1-201ENSMUST00000112874 Lire1P11260 357 aa8.52□□□□□ -1.05
Nck1-201ENSMUST00000112874 Map4k4P97820 1233 aaKnown RBP8.52□□□□□ -1.05
Nck1-201ENSMUST00000112874 Mkrn1Q9QXP6 481 aa8.52□□□□□ -1.05
Nck1-201ENSMUST00000112874 Nub1P54729 614 aa8.51□□□□□ -1.05
Nck1-201ENSMUST00000112874 Snd1Q78PY7 910 aaKnown RBP8.51□□□□□ -1.05
Nck1-201ENSMUST00000112874 Tmem259Q8CIV2 574 aa8.51□□□□□ -1.05
Nck1-201ENSMUST00000112874 Cetn4Q8K4K1 168 aa8.51□□□□□ -1.05
Nck1-201ENSMUST00000112874 4930519G04RikQ9CPT7 205 aa8.51□□□□□ -1.05
Nck1-201ENSMUST00000112874 Arhgap4B1AUY3 965 aa8.5□□□□□ -1.05
Nck1-201ENSMUST00000112874 Brd1E9PZ26 1189 aaKnown RBP8.5□□□□□ -1.05
Nck1-201ENSMUST00000112874 Rbm46P86049 533 aa8.5□□□□□ -1.05
Nck1-201ENSMUST00000112874 AmotQ8VHG2 1126 aa8.5□□□□□ -1.05
Nck1-201ENSMUST00000112874 Znf335A2A5K6 1337 aa8.5□□□□□ -1.05
Nck1-201ENSMUST00000112874 ZxdbA2CE44 873 aa8.49□□□□□ -1.05
Nck1-201ENSMUST00000112874 Ms4a1P19437 291 aa8.49□□□□□ -1.05
Nck1-201ENSMUST00000112874 Apba2P98084 750 aa8.49□□□□□ -1.05
Nck1-201ENSMUST00000112874 Dusp27Q148W8 1138 aa8.49□□□□□ -1.05
Nck1-201ENSMUST00000112874 U2surpQ6NV83 1029 aaKnown RBP8.49□□□□□ -1.05
Nck1-201ENSMUST00000112874 Atl2Q6PA06 583 aa8.49□□□□□ -1.05
Nck1-201ENSMUST00000112874 Suz12Q80U70 741 aaKnown RBP8.49□□□□□ -1.05
Nck1-201ENSMUST00000112874 Ppp1r37Q8BKR5 712 aa8.49□□□□□ -1.05
Nck1-201ENSMUST00000112874 Tmc2Q8R4P4 888 aa8.49□□□□□ -1.05
Nck1-201ENSMUST00000112874 Exosc9Q9JHI7 438 aaKnown RBP8.49□□□□□ -1.05
Nck1-201ENSMUST00000112874 Usp33Q8R5K2 909 aa8.48□□□□□ -1.05
Nck1-201ENSMUST00000112874 Scarf1Q5ND28 820 aa8.47□□□□□ -1.05
Nck1-201ENSMUST00000112874 Tbc1d12Q6A039 696 aa8.47□□□□□ -1.05
Nck1-201ENSMUST00000112874 Ivns1abpQ920Q8 642 aa8.47□□□□□ -1.05
Nck1-201ENSMUST00000112874 SelenooQ9DBC0 667 aa8.47□□□□□ -1.05
Nck1-201ENSMUST00000112874 Baz1bQ9Z277 1479 aa8.46□□□□□ -1.05
Nck1-201ENSMUST00000112874 Gm45233A0A0N4SVE0 221 aa8.46□□□□□ -1.05
Nck1-201ENSMUST00000112874 NppbP40753 121 aa8.46□□□□□ -1.05
Nck1-201ENSMUST00000112874 Tnnt2P50752 301 aa8.46□□□□□ -1.05
Nck1-201ENSMUST00000112874 Gripap1Q8VD04 806 aa8.46□□□□□ -1.05
Nck1-201ENSMUST00000112874 Mrps9Q9D7N3 390 aaKnown RBP8.46□□□□□ -1.05
Nck1-201ENSMUST00000112874 Gm21083A0A0G2JFD5 256 aa8.45□□□□□ -1.06
Nck1-201ENSMUST00000112874 Gm21149A0A0G2JFY7 255 aa8.45□□□□□ -1.06
Nck1-201ENSMUST00000112874 Speer4cG3UXD1 256 aa8.45□□□□□ -1.06
Nck1-201ENSMUST00000112874 Gm17019K7N6W5 255 aa8.45□□□□□ -1.06
Nck1-201ENSMUST00000112874 Ppp4cP97470 307 aa8.45□□□□□ -1.06
Nck1-201ENSMUST00000112874 Tmed1Q3V009 227 aa8.45□□□□□ -1.06
Nck1-201ENSMUST00000112874 Gm9758Q80ZT2 255 aa8.45□□□□□ -1.06
Nck1-201ENSMUST00000112874 Mta1Q8K4B0 715 aaKnown RBP8.45□□□□□ -1.06
Nck1-201ENSMUST00000112874 Gm21680A0A0G2JGR8 267 aa8.44□□□□□ -1.06
Nck1-201ENSMUST00000112874 Pus7B7ZNL8 666 aaKnown RBP8.44□□□□□ -1.06
Nck1-201ENSMUST00000112874 Gm1979E9QAN3 267 aa8.44□□□□□ -1.06
Nck1-201ENSMUST00000112874 Map2k1P31938 393 aa8.44□□□□□ -1.06
Nck1-201ENSMUST00000112874 Arhgef1Q61210 920 aaKnown RBP8.44□□□□□ -1.06
Nck1-201ENSMUST00000112874 Ankrd23Q812A3 306 aa8.44□□□□□ -1.06
Nck1-201ENSMUST00000112874 Gm21663A0A0G2JE01 267 aa8.44□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms