RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Rbm10Q99KG3 930 aaKnown RBP22,07■■□□□ 1,12
Trim71-201ENSMUST00000111816 Trim29Q8R2Q0 587 aa22,06■■□□□ 1,12
Trim71-201ENSMUST00000111816 Usp35M0QWN7 1009 aa22,06■■□□□ 1,12
Trim71-201ENSMUST00000111816 Znf330Q922H9 316 aa22,06■■□□□ 1,12
Trim71-201ENSMUST00000111816 Ppfibp2O35711 882 aa22,05■■□□□ 1,12
Trim71-201ENSMUST00000111816 Smc4Q8CG47 1286 aa22,05■■□□□ 1,12
Trim71-201ENSMUST00000111816 Hmgb1P63158 215 aaKnown RBP22,05■■□□□ 1,12
Trim71-201ENSMUST00000111816 Gprasp1Q5U4C1 1347 aa22,04■■□□□ 1,12
Trim71-201ENSMUST00000111816 Rrp7aQ9D1C9 280 aaKnown RBP22,04■■□□□ 1,12
Trim71-201ENSMUST00000111816 ClasrpQ8CFC7 668 aa22,04■■□□□ 1,12
Trim71-201ENSMUST00000111816 UvssaQ9D479 717 aa22,04■■□□□ 1,12
Trim71-201ENSMUST00000111816 Kif20aP97329 887 aa22,04■■□□□ 1,12
Trim71-201ENSMUST00000111816 Plin1Q8CGN5 517 aa22,04■■□□□ 1,12
Trim71-201ENSMUST00000111816 Fez1Q8K0X8 392 aa22,04■■□□□ 1,12
Trim71-201ENSMUST00000111816 MyclP10166 368 aa22,03■■□□□ 1,12
Trim71-201ENSMUST00000111816 Nop14Q8R3N1 860 aaKnown RBP22,03■■□□□ 1,12
Trim71-201ENSMUST00000111816 TxlnbQ8VBT1 685 aa22,03■■□□□ 1,12
Trim71-201ENSMUST00000111816 Ksr2Q3UVC0 959 aa22,03■■□□□ 1,12
Trim71-201ENSMUST00000111816 Arhgef18Q6P9R4 1021 aa22,03■■□□□ 1,12
Trim71-201ENSMUST00000111816 Acbd3Q8BMP6 525 aa22,02■■□□□ 1,12
Trim71-201ENSMUST00000111816 AampJ3QN89 436 aa22,02■■□□□ 1,12
Trim71-201ENSMUST00000111816 StambpQ9CQ26 424 aa22,02■■□□□ 1,12
Trim71-201ENSMUST00000111816 Fyco1Q8VDC1 1437 aa22,02■■□□□ 1,12
Trim71-201ENSMUST00000111816 Commd10Q8JZY2 202 aa22,01■■□□□ 1,11
Trim71-201ENSMUST00000111816 Ddx46Q569Z5 1032 aaKnown RBP22■■□□□ 1,11
Trim71-201ENSMUST00000111816 Aebp1Q640N1 1128 aa22■■□□□ 1,11
Trim71-201ENSMUST00000111816 PdcQ9QW08 244 aa22■■□□□ 1,11
Trim71-201ENSMUST00000111816 Kif16bB1AVY7 1312 aa22■■□□□ 1,11
Trim71-201ENSMUST00000111816 Slc4a10Q5DTL9 1118 aa21,99■■□□□ 1,11
Trim71-201ENSMUST00000111816 IncenpQ9WU62 880 aa21,99■■□□□ 1,11
Trim71-201ENSMUST00000111816 Phldb2Q8K1N2 1249 aa21,99■■□□□ 1,11
Trim71-201ENSMUST00000111816 Cchcr1Q8K2I2 770 aa21,99■■□□□ 1,11
Trim71-201ENSMUST00000111816 Ccp110Q7TSH4 1004 aa21,99■■□□□ 1,11
Trim71-201ENSMUST00000111816 DmtnQ9WV69 405 aa21,98■■□□□ 1,11
Trim71-201ENSMUST00000111816 Pip4k2aO70172 405 aa21,98■■□□□ 1,11
Trim71-201ENSMUST00000111816 Hdgfl1Q2VPR5 283 aa21,98■■□□□ 1,11
Trim71-201ENSMUST00000111816 Sept11Q8C1B7 431 aaKnown RBP21,98■■□□□ 1,11
Trim71-201ENSMUST00000111816 4921530L21RikQ9CQ47 274 aa21,98■■□□□ 1,11
Trim71-201ENSMUST00000111816 Gtf2e1Q9D0D5 440 aa21,97■■□□□ 1,11
Trim71-201ENSMUST00000111816 Smc3Q9CW03 1217 aaKnown RBP21,97■■□□□ 1,11
Trim71-201ENSMUST00000111816 Tceal9Q9DD24 104 aa21,96■■□□□ 1,11
Trim71-201ENSMUST00000111816 MicalclQ9D5U9 680 aa21,96■■□□□ 1,11
Trim71-201ENSMUST00000111816 Ccdc181Q80ZU5 509 aa21,95■■□□□ 1,11
Trim71-201ENSMUST00000111816 Nolc1E9Q5C9 702 aaKnown RBP21,95■■□□□ 1,1
Trim71-201ENSMUST00000111816 Rock2P70336 1388 aa21,95■■□□□ 1,1
Trim71-201ENSMUST00000111816 Ggt6Q6PDE7 497 aa21,95■■□□□ 1,1
Trim71-201ENSMUST00000111816 Rbm25B2RY56 838 aaKnown RBP21,95■■□□□ 1,1
Trim71-201ENSMUST00000111816 Anapc15-psA0A140T8L6 141 aa21,94■■□□□ 1,1
Trim71-201ENSMUST00000111816 Rundc1Q0VDN7 615 aa21,94■■□□□ 1,1
Trim71-201ENSMUST00000111816 Lrrc45Q8CIM1 670 aa21,94■■□□□ 1,1
Trim71-201ENSMUST00000111816 4933428M09RikQ9D3X3 192 aa21,94■■□□□ 1,1
Trim71-201ENSMUST00000111816 Nat10Q8K224 1024 aaKnown RBP21,94■■□□□ 1,1
Trim71-201ENSMUST00000111816 Hnrnpul1Q8VDM6 859 aaKnown RBP21,94■■□□□ 1,1
Trim71-201ENSMUST00000111816 Cep89Q9CZX2 791 aa21,94■■□□□ 1,1
Trim71-201ENSMUST00000111816 Fez2Q6TYB5 348 aa21,93■■□□□ 1,1
Trim71-201ENSMUST00000111816 Otud6bQ8K2H2 294 aa21,93■■□□□ 1,1
Trim71-201ENSMUST00000111816 Ccdc146E9Q9F7 977 aa21,93■■□□□ 1,1
Trim71-201ENSMUST00000111816 SelenooQ9DBC0 667 aa21,92■■□□□ 1,1
Trim71-201ENSMUST00000111816 Ddx23D3Z0M9 819 aaKnown RBP21,92■■□□□ 1,1
Trim71-201ENSMUST00000111816 Rab11fip3Q8CHD8 1047 aa21,92■■□□□ 1,1
Trim71-201ENSMUST00000111816 Dusp27Q148W8 1138 aa21,92■■□□□ 1,1
Trim71-201ENSMUST00000111816 Ccdc96Q9CR92 584 aa21,92■■□□□ 1,1
Trim71-201ENSMUST00000111816 NcapgE9PWG6 1004 aa21,92■■□□□ 1,1
Trim71-201ENSMUST00000111816 Jakmip2D3YXK0 820 aa21,91■■□□□ 1,1
Trim71-201ENSMUST00000111816 Bag1Q60739 355 aa21,91■■□□□ 1,1
Trim71-201ENSMUST00000111816 Fam107bQ3TGF2 131 aa21,91■■□□□ 1,1
Trim71-201ENSMUST00000111816 Gm42641I6L9G2 585 aa21,9■■□□□ 1,1
Trim71-201ENSMUST00000111816 AtripQ8BMG1 785 aa21,9■■□□□ 1,1
Trim71-201ENSMUST00000111816 Ctr9Q62018 1173 aaKnown RBP21,89■■□□□ 1,1
Trim71-201ENSMUST00000111816 Rfx1P48377 963 aa21,89■■□□□ 1,1
Trim71-201ENSMUST00000111816 Vgll3P85442 326 aa21,89■■□□□ 1,09
Trim71-201ENSMUST00000111816 Birc3O08863 600 aa21,89■■□□□ 1,09
Trim71-201ENSMUST00000111816 Exoc6Q8R313 802 aa21,88■■□□□ 1,09
Trim71-201ENSMUST00000111816 Nf2P46662 596 aa21,88■■□□□ 1,09
Trim71-201ENSMUST00000111816 TxlnaQ6PAM1 554 aaKnown RBP21,88■■□□□ 1,09
Trim71-201ENSMUST00000111816 1700010I14RikQ7TPG0 532 aa21,87■■□□□ 1,09
Trim71-201ENSMUST00000111816 Ccdc191J3QQ27 883 aa21,87■■□□□ 1,09
Trim71-201ENSMUST00000111816 Dhx16G3X8X0 1044 aaKnown RBP21,86■■□□□ 1,09
Trim71-201ENSMUST00000111816 Cfap99A0A140LIX9 648 aa21,86■■□□□ 1,09
Trim71-201ENSMUST00000111816 Trim30cD3YVI9 513 aa21,86■■□□□ 1,09
Trim71-201ENSMUST00000111816 Rnf187Q8BFX1 236 aa21,86■■□□□ 1,09
Trim71-201ENSMUST00000111816 Mnat1P51949 309 aa21,85■■□□□ 1,09
Trim71-201ENSMUST00000111816 Stim1P70302 685 aa21,85■■□□□ 1,09
Trim71-201ENSMUST00000111816 CrcpO35427 148 aa21,85■■□□□ 1,09
Trim71-201ENSMUST00000111816 NefhP19246 1090 aa21,85■■□□□ 1,09
Trim71-201ENSMUST00000111816 LarsQ8BMJ2 1178 aa21,84■■□□□ 1,09
Trim71-201ENSMUST00000111816 Psma5Q9Z2U1 241 aaKnown RBP21,84■■□□□ 1,09
Trim71-201ENSMUST00000111816 Kcnj4P52189 445 aa21,84■■□□□ 1,09
Trim71-201ENSMUST00000111816 Erc2Q6PH08 957 aa21,84■■□□□ 1,09
Trim71-201ENSMUST00000111816 4921504E06RikQ8CET2 560 aa21,83■■□□□ 1,09
Trim71-201ENSMUST00000111816 CastP51125 788 aa21,83■■□□□ 1,09
Trim71-201ENSMUST00000111816 Eif3aP23116 1344 aaKnown RBP21,83■■□□□ 1,08
Trim71-201ENSMUST00000111816 Ccdc39Q9D5Y1 937 aa21,83■■□□□ 1,08
Trim71-201ENSMUST00000111816 Ccdc102aQ3TMW1 549 aa21,82■■□□□ 1,08
Trim71-201ENSMUST00000111816 Homer1Q9Z2Y3 366 aa21,82■■□□□ 1,08
Trim71-201ENSMUST00000111816 CenpqQ9CPQ5 267 aa21,82■■□□□ 1,08
Trim71-201ENSMUST00000111816 Dcaf11Q91VU6 549 aa21,81■■□□□ 1,08
Trim71-201ENSMUST00000111816 L1td1Q587J6 782 aaKnown RBP21,81■■□□□ 1,08
Trim71-201ENSMUST00000111816 CrbnQ8C7D2 445 aa21,81■■□□□ 1,08
Trim71-201ENSMUST00000111816 Wdr63B2RY71 923 aa21,81■■□□□ 1,08
Retrieved 100 of 22,080 RNA–protein pairs in 11,6 ms