RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 Fgd6Q69ZL1 1399 aa10.64□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Fan1Q69ZT1 1020 aa10.64□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Ccdc30Q8BVF4 654 aa10.64□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Abcc2Q8VI47 1543 aa10.63□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Trim26Q99PN3 545 aa10.63□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Trappc8E9PWG2 1437 aa10.63□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Sart3Q9JLI8 962 aaKnown RBP10.63□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Mink1Q9JM52 1308 aa10.63□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Usp40Q8BWR4 1235 aa10.62□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Ipo8Q7TMY7 1010 aa10.61□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Trpm2Q91YD4 1506 aa10.61□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Gm14025A2AP89 1413 aa10.61□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Ralbp1Q62172 648 aa10.61□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Atp1b4Q99ME6 356 aa10.61□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Stag3O70576 1240 aa10.6□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Lemd3Q9WU40 921 aa10.6□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Dot1lQ6XZL8 1540 aa10.6□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Mre11Q61216 706 aa10.59□□□□□ -0.71
Bdnf-208ENSMUST00000111049 IqubQ8CDK3 788 aa10.59□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Mroh2aD3Z750 1679 aa10.59□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Setd1bQ8CFT2 1985 aa10.59□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Armcx1Q9CX83 456 aa10.59□□□□□ -0.71
Bdnf-208ENSMUST00000111049 Htatsf1Q8BGC0 757 aa10.58□□□□□ -0.72
Bdnf-208ENSMUST00000111049 TnikP83510 1323 aa10.58□□□□□ -0.72
Bdnf-208ENSMUST00000111049 ErbinQ80TH2 1402 aa10.58□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Gtf3c3Q3TMP1 882 aa10.58□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Kdm5cP41230 1554 aa10.57□□□□□ -0.72
Bdnf-208ENSMUST00000111049 AI481877A2ALV5 1481 aa10.57□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Rangap1P46061 589 aaKnown RBP10.57□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Arid3cA6PWV5 409 aa10.56□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Sall3Q62255 1320 aa10.56□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Ppip5k1A2ARP1 1436 aa10.56□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Ak7Q9D2H2 614 aa10.56□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Sbno1Q689Z5 1390 aa10.56□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Eif2s2Q99L45 331 aaKnown RBP10.55□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Exosc9Q9JHI7 438 aaKnown RBP10.55□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Tex14Q7M6U3 1450 aa10.55□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Atf7ipQ7TT18 1306 aa10.55□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Trim58Q5NCC9 485 aa10.55□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Gapvd1Q6PAR5 1458 aa10.55□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Eif4g3Q80XI3 1579 aaKnown RBP10.55□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Fam208aQ69ZR9 1610 aaKnown RBP10.55□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Smc5Q8CG46 1101 aaKnown RBP10.54□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Pank1Q8K4K6 548 aa10.54□□□□□ -0.72
Bdnf-208ENSMUST00000111049 U2af1Q9D883 239 aaKnown RBP10.54□□□□□ -0.72
Bdnf-208ENSMUST00000111049 GsdmaQ9EST1 446 aa10.54□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Ksr2Q3UVC0 959 aa10.53□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Rrbp1Q99PL5 1605 aaKnown RBP10.53□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Tarbp1E9Q368 1579 aa10.53□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Cfap74Q3UY96 1578 aa10.53□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Iqgap1Q9JKF1 1657 aaKnown RBP10.52□□□□□ -0.72
Bdnf-208ENSMUST00000111049 Setd1aE9PYH6 1716 aa10.52□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Ccdc183A2AJB1 534 aa10.52□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Puf60Q3UEB3 564 aaKnown RBP10.52□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Kdm2bQ6P1G2 1309 aa10.51□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Gm16486A0A1D5RMD1 1434 aa10.51□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Edc4Q3UJB9 1406 aaKnown RBP10.51□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Tspyl2Q7TQI8 677 aa10.51□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Ylpm1Q9R0I7 1386 aaKnown RBP10.51□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Atp10dQ8K2X1 1416 aa10.5□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Rusc2Q80U22 1514 aa10.5□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Nkx1-2P42580 305 aa10.5□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Ccar1Q8CH18 1146 aaKnown RBP10.5□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Mast1Q9R1L5 1570 aa10.5□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Lrriq1Q0P5X1 1673 aa10.5□□□□□ -0.73
Bdnf-208ENSMUST00000111049 AampJ3QN89 436 aa10.5□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Tsen2Q6P7W5 460 aa10.5□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Plch2A2AP18 1501 aa10.5□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Ttc21bQ0HA38 1315 aa10.5□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Ttc41Q692V3 1318 aa10.5□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Gm6268A2A3U9 297 aa10.49□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Cluap1Q8R3P7 413 aa10.49□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Gtf3c5Q8R2T8 520 aa10.49□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Map7O88735 730 aa10.49□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Abcc6Q9R1S7 1498 aa10.48□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Ak9G3UYQ4 1894 aa10.48□□□□□ -0.73
Bdnf-208ENSMUST00000111049 CenpjQ569L8 1344 aa10.48□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Q8BT18 775 aa10.47□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Stk26Q99JT2 416 aa10.47□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Uspl1Q3ULM6 1089 aa10.47□□□□□ -0.73
Bdnf-208ENSMUST00000111049 KarsQ99MN1 595 aaKnown RBP10.47□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Dnmt1P13864 1620 aaKnown RBP10.47□□□□□ -0.73
Bdnf-208ENSMUST00000111049 Map4k4P97820 1233 aaKnown RBP10.46□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Spryd3E9Q9B3 442 aa10.45□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Apaf1O88879 1249 aa10.45□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Phf23Q8BSN5 401 aa10.45□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Tulp4Q9JIL5 1547 aa10.45□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Ppp2r3aB2RXC8 1150 aa10.44□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Mfap1aC0HKD8 439 aaKnown RBP10.44□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Mfap1bC0HKD9 439 aaKnown RBP10.44□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Igf1rQ60751 1373 aa10.44□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Cald1E9QA15 768 aaKnown RBP10.44□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Atl3Q91YH5 541 aa10.44□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Atxn3Q9CVD2 355 aa10.44□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Rnf17Q99MV7 1640 aa10.44□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Kif1bQ60575 1816 aaKnown RBP10.44□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Znf330Q922H9 316 aa10.44□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Cep170Q6A065 1588 aa10.43□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Zmym3Q9JLM4 1370 aa10.43□□□□□ -0.74
Bdnf-208ENSMUST00000111049 Gm32742A0A1B0GT42 1604 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms