RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Puf60Q3UEB3 564 aaKnown RBP13.61□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Rsph3aQ3UFY4 516 aa13.6□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Ric3Q8BPM6 367 aa13.6□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Chmp4cQ9D7F7 232 aa13.6□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Bcl2l13P59017 434 aa13.6□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Ccdc30Q8BVF4 654 aa13.6□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Rfx1P48377 963 aa13.59□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Neurod6P48986 337 aa13.59□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Smc4Q8CG47 1286 aa13.59□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Cd109Q8R422 1442 aa13.59□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Filip1lQ6P6L0 1131 aa13.59□□□□□ -0.23
Scn8a-203ENSMUST00000108908 NrkQ9R0G8 1455 aa13.59□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Isy1Q69ZQ2 285 aaKnown RBP13.59□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Grin2bQ01097 1482 aa13.59□□□□□ -0.23
Scn8a-203ENSMUST00000108908 RdxP26043 583 aaKnown RBP13.59□□□□□ -0.23
Scn8a-203ENSMUST00000108908 MsnP26041 577 aaKnown RBP13.58□□□□□ -0.23
Scn8a-203ENSMUST00000108908 Naip1Q9QWK5 1403 aa13.58□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Pank1Q8K4K6 548 aa13.58□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Arap1Q4LDD4 1452 aa13.57□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Rbm25B2RY56 838 aaKnown RBP13.57□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Trim58Q5NCC9 485 aa13.57□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Atf3Q60765 181 aa13.57□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Atp2b2Q9R0K7 1198 aa13.57□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Casq1O09165 405 aa13.57□□□□□ -0.24
Scn8a-203ENSMUST00000108908 St18Q80TY4 1045 aa13.57□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Gsdma3Q5Y4Y6 464 aa13.56□□□□□ -0.24
Scn8a-203ENSMUST00000108908 BcanQ61361 883 aa13.56□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Swt1Q9DBQ9 907 aa13.56□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Crocc2F6XLV1 1638 aa13.56□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Zpr1Q62384 459 aa13.56□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Sf3a1Q8K4Z5 791 aaKnown RBP13.56□□□□□ -0.24
Scn8a-203ENSMUST00000108908 BccipQ9CWI3 316 aa13.56□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Dhx16G3X8X0 1044 aaKnown RBP13.56□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Ncapd3Q6ZQK0 1506 aa13.56□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Ak7Q9D2H2 614 aa13.55□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Ddx11Q6AXC6 880 aa13.55□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Hmox1P14901 289 aa13.55□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Tiam1Q60610 1591 aa13.55□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Calcoco2A2A6M5 331 aa13.55□□□□□ -0.24
Scn8a-203ENSMUST00000108908 FosbP13346 338 aa13.54□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Prdm16A2A935 1275 aa13.54□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Mroh2bQ7M6Y6 1581 aa13.54□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Phactr2B1AVP0 632 aa13.54□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Nap1l3Q794H2 544 aa13.54□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Q7TT23 1179 aa13.54□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Sv2bQ8BG39 683 aa13.53□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Gnai1B2RSH2 354 aa13.53□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Kiaa0754Q69ZZ9 979 aa13.53□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Gnai3Q9DC51 354 aa13.53□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Kif16bB1AVY7 1312 aa13.53□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Tnnt2P50752 301 aa13.53□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Top2bQ64511 1612 aa13.53□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Gm21969J3QJZ1 289 aa13.53□□□□□ -0.24
Scn8a-203ENSMUST00000108908 Sirt1Q923E4 737 aa13.52□□□□□ -0.24
Scn8a-203ENSMUST00000108908 FanciQ8K368 1330 aa13.52□□□□□ -0.25
Scn8a-203ENSMUST00000108908 MpripP97434 1024 aa13.52□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Mrc2Q64449 1479 aa13.52□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Frmpd1A2AKB4 1549 aa13.52□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Cfdp1O88271 295 aaKnown RBP13.51□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Q8C5K5 320 aa13.51□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Gm10471E9Q1C7 252 aa13.51□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Kri1Q8VDQ9 704 aaKnown RBP13.51□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Polr3gQ6NXY9 223 aa13.51□□□□□ -0.25
Scn8a-203ENSMUST00000108908 TatQ8QZR1 454 aa13.51□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Evi5lH3BKQ3 813 aa13.51□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Krt82Q99M74 516 aa13.51□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Rrp12Q6P5B0 1295 aaKnown RBP13.51□□□□□ -0.25
Scn8a-203ENSMUST00000108908 KinQ8K339 391 aa13.51□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Mphosph10Q810V0 681 aaKnown RBP13.5□□□□□ -0.25
Scn8a-203ENSMUST00000108908 TchhA0A0B4J1F9 1599 aa13.49□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Dhx9O70133 1380 aaKnown RBP13.49□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Pcf11G3X9Z4 1553 aa13.49□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Ppp2r1aQ76MZ3 589 aa13.49□□□□□ -0.25
Scn8a-203ENSMUST00000108908 KarsQ99MN1 595 aaKnown RBP13.49□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Utp3Q9JI13 469 aaKnown RBP13.49□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Camsap1A2AHC3 1581 aa13.48□□□□□ -0.25
Scn8a-203ENSMUST00000108908 PogzQ8BZH4 1409 aaKnown RBP13.48□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Stk3Q9JI10 497 aa13.48□□□□□ -0.25
Scn8a-203ENSMUST00000108908 PnisrA2AJT4 805 aaKnown RBP13.48□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Eva1cP58659 440 aa13.48□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Apaf1O88879 1249 aa13.48□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Mre11Q61216 706 aa13.47□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Q9D2X8 372 aa13.47□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Myom3A2ABU4 1439 aa13.47□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Cdk19Q8BWD8 501 aa13.47□□□□□ -0.25
Scn8a-203ENSMUST00000108908 EprsQ8CGC7 1512 aaKnown RBP13.47□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Afap1Q80YS6 731 aa13.47□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Sh3bgrQ9WUZ7 214 aa13.47□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Trim30aP15533 496 aa13.47□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Zranb3Q6NZP1 1069 aa13.47□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Plekhh1Q80TI1 1356 aa13.46□□□□□ -0.25
Scn8a-203ENSMUST00000108908 CrcpO35427 148 aa13.46□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Map3k1P53349 1493 aa13.46□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Cspp1B2RX88 1205 aa13.46□□□□□ -0.25
Scn8a-203ENSMUST00000108908 PtprkP35822 1457 aa13.46□□□□□ -0.25
Scn8a-203ENSMUST00000108908 Tpm3P21107 285 aaKnown RBP13.46□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Ccp110Q7TSH4 1004 aa13.46□□□□□ -0.26
Scn8a-203ENSMUST00000108908 PhaxQ9JJT9 385 aaKnown RBP13.46□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Cabp2Q9JLK4 216 aa13.46□□□□□ -0.26
Scn8a-203ENSMUST00000108908 Sytl4Q9R0Q1 673 aa13.46□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 54 ms