RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Noc3lQ8VI84 807 aaKnown RBP14.1□□□□□ -0.15
Chd3-202ENSMUST00000108661 Bcl2l13P59017 434 aa14.1□□□□□ -0.15
Chd3-202ENSMUST00000108661 Ccdc27Q3V036 639 aa14.09□□□□□ -0.15
Chd3-202ENSMUST00000108661 PnisrA2AJT4 805 aaKnown RBP14.08□□□□□ -0.15
Chd3-202ENSMUST00000108661 SafbD3YXK2 937 aaKnown RBP14.08□□□□□ -0.15
Chd3-202ENSMUST00000108661 Puf60Q3UEB3 564 aaKnown RBP14.08□□□□□ -0.15
Chd3-202ENSMUST00000108661 Paf1Q8K2T8 535 aa14.08□□□□□ -0.15
Chd3-202ENSMUST00000108661 UvssaQ9D479 717 aa14.07□□□□□ -0.16
Chd3-202ENSMUST00000108661 Dnttip2Q8R2M2 758 aaKnown RBP14.07□□□□□ -0.16
Chd3-202ENSMUST00000108661 Speer4bQ9D9F7 267 aa14.07□□□□□ -0.16
Chd3-202ENSMUST00000108661 Dennd6aQ8BH65 605 aa14.07□□□□□ -0.16
Chd3-202ENSMUST00000108661 Tceal9Q9DD24 104 aa14.07□□□□□ -0.16
Chd3-202ENSMUST00000108661 Gm7298A0A0N4SVU1 1476 aa14.07□□□□□ -0.16
Chd3-202ENSMUST00000108661 Ncbp3Q8BZR9 615 aaKnown RBP14.07□□□□□ -0.16
Chd3-202ENSMUST00000108661 Inpp5dQ9ES52 1191 aa14.07□□□□□ -0.16
Chd3-202ENSMUST00000108661 CrcpO35427 148 aa14.06□□□□□ -0.16
Chd3-202ENSMUST00000108661 Tpd52l1O54818 204 aa14.06□□□□□ -0.16
Chd3-202ENSMUST00000108661 Smarce1O54941 411 aaKnown RBP14.06□□□□□ -0.16
Chd3-202ENSMUST00000108661 Fam184bQ0KK56 942 aa14.06□□□□□ -0.16
Chd3-202ENSMUST00000108661 Ccdc60Q8C4J0 545 aa14.06□□□□□ -0.16
Chd3-202ENSMUST00000108661 Eif2s2Q99L45 331 aaKnown RBP14.06□□□□□ -0.16
Chd3-202ENSMUST00000108661 TefQ9JLC6 301 aa14.06□□□□□ -0.16
Chd3-202ENSMUST00000108661 Neurod6P48986 337 aa14.06□□□□□ -0.16
Chd3-202ENSMUST00000108661 Gm973E9Q295 1059 aa14.06□□□□□ -0.16
Chd3-202ENSMUST00000108661 Wdhd1P59328 1117 aa14.06□□□□□ -0.16
Chd3-202ENSMUST00000108661 Hmgb2P30681 210 aaKnown RBP14.06□□□□□ -0.16
Chd3-202ENSMUST00000108661 Q8C5K5 320 aa14.06□□□□□ -0.16
Chd3-202ENSMUST00000108661 Gimap5Q8BWF2 308 aa14.05□□□□□ -0.16
Chd3-202ENSMUST00000108661 CrebrfQ8CDG5 640 aaKnown RBP14.05□□□□□ -0.16
Chd3-202ENSMUST00000108661 Gm21680A0A0G2JGR8 267 aa14.04□□□□□ -0.16
Chd3-202ENSMUST00000108661 Ccp110Q7TSH4 1004 aa14.04□□□□□ -0.16
Chd3-202ENSMUST00000108661 Gm21969J3QJZ1 289 aa14.04□□□□□ -0.16
Chd3-202ENSMUST00000108661 Crocc2F6XLV1 1638 aa14.04□□□□□ -0.16
Chd3-202ENSMUST00000108661 Cnnm1Q0GA42 951 aa14.03□□□□□ -0.16
Chd3-202ENSMUST00000108661 Hs1bp3Q3TC93 395 aa14.03□□□□□ -0.16
Chd3-202ENSMUST00000108661 Krt82Q99M74 516 aa14.03□□□□□ -0.16
Chd3-202ENSMUST00000108661 Mapk8ip1Q9WVI9 707 aa14.03□□□□□ -0.16
Chd3-202ENSMUST00000108661 Plb1Q3TTY0 1478 aa14.03□□□□□ -0.16
Chd3-202ENSMUST00000108661 Gm21663A0A0G2JE01 267 aa14.02□□□□□ -0.16
Chd3-202ENSMUST00000108661 Gm7361D3Z6R1 267 aa14.02□□□□□ -0.16
Chd3-202ENSMUST00000108661 5031410I06RikE9Q4E0 267 aa14.02□□□□□ -0.16
Chd3-202ENSMUST00000108661 Gm1979E9QAN3 267 aa14.02□□□□□ -0.16
Chd3-202ENSMUST00000108661 Gm5862K7N5V5 267 aa14.02□□□□□ -0.16
Chd3-202ENSMUST00000108661 Gm10220K7N660 267 aa14.02□□□□□ -0.16
Chd3-202ENSMUST00000108661 Plagl1Q9JLQ4 704 aa14.02□□□□□ -0.16
Chd3-202ENSMUST00000108661 Odf2A3KGV1 830 aaKnown RBP14.02□□□□□ -0.17
Chd3-202ENSMUST00000108661 Ccdc146E9Q9F7 977 aa14.01□□□□□ -0.17
Chd3-202ENSMUST00000108661 PtmsQ9D0J8 101 aaKnown RBP14.01□□□□□ -0.17
Chd3-202ENSMUST00000108661 G3bp1P97855 465 aaKnown RBP14.01□□□□□ -0.17
Chd3-202ENSMUST00000108661 HnrnpmQ9D0E1 729 aaKnown RBP14□□□□□ -0.17
Chd3-202ENSMUST00000108661 GorabQ8BRM2 368 aa14□□□□□ -0.17
Chd3-202ENSMUST00000108661 Usp16Q99LG0 825 aa14□□□□□ -0.17
Chd3-202ENSMUST00000108661 Top2aQ01320 1528 aaKnown RBP14□□□□□ -0.17
Chd3-202ENSMUST00000108661 Acsbg1Q99PU5 721 aa14□□□□□ -0.17
Chd3-202ENSMUST00000108661 Bicdl1A0JNT9 577 aa14□□□□□ -0.17
Chd3-202ENSMUST00000108661 Gpatch11Q3UFS4 262 aa14□□□□□ -0.17
Chd3-202ENSMUST00000108661 TkfcQ8VC30 578 aa14□□□□□ -0.17
Chd3-202ENSMUST00000108661 HypkQ9CR41 129 aa14□□□□□ -0.17
Chd3-202ENSMUST00000108661 Mfap1aC0HKD8 439 aaKnown RBP13.99□□□□□ -0.17
Chd3-202ENSMUST00000108661 Mfap1bC0HKD9 439 aaKnown RBP13.99□□□□□ -0.17
Chd3-202ENSMUST00000108661 Igf1rQ60751 1373 aa13.99□□□□□ -0.17
Chd3-202ENSMUST00000108661 Chmp5Q9D7S9 219 aa13.99□□□□□ -0.17
Chd3-202ENSMUST00000108661 Tom1O88746 492 aa13.98□□□□□ -0.17
Chd3-202ENSMUST00000108661 Ccer1Q9CQL2 403 aa13.98□□□□□ -0.17
Chd3-202ENSMUST00000108661 ApobrQ8VBT6 942 aa13.98□□□□□ -0.17
Chd3-202ENSMUST00000108661 IbspQ61711 324 aa13.98□□□□□ -0.17
Chd3-202ENSMUST00000108661 Adam1bQ8R534 806 aa13.98□□□□□ -0.17
Chd3-202ENSMUST00000108661 Irx3P81067 507 aa13.98□□□□□ -0.17
Chd3-202ENSMUST00000108661 Cfdp1O88271 295 aaKnown RBP13.98□□□□□ -0.17
Chd3-202ENSMUST00000108661 Ell2Q3UKU1 639 aa13.98□□□□□ -0.17
Chd3-202ENSMUST00000108661 Ttc5Q99LG4 440 aa13.98□□□□□ -0.17
Chd3-202ENSMUST00000108661 4930572O03RikQ8C5Y0 211 aa13.97□□□□□ -0.17
Chd3-202ENSMUST00000108661 A2mQ6GQT1 1474 aa13.97□□□□□ -0.17
Chd3-202ENSMUST00000108661 Frmpd1A2AKB4 1549 aa13.97□□□□□ -0.17
Chd3-202ENSMUST00000108661 Cd109Q8R422 1442 aa13.97□□□□□ -0.17
Chd3-202ENSMUST00000108661 PtprkP35822 1457 aa13.97□□□□□ -0.17
Chd3-202ENSMUST00000108661 PogzQ8BZH4 1409 aaKnown RBP13.96□□□□□ -0.17
Chd3-202ENSMUST00000108661 Cgnl1Q6AW69 1298 aa13.96□□□□□ -0.17
Chd3-202ENSMUST00000108661 Cdk19Q8BWD8 501 aa13.96□□□□□ -0.17
Chd3-202ENSMUST00000108661 Samd1D3YXK1 519 aa13.96□□□□□ -0.17
Chd3-202ENSMUST00000108661 Rapgef4Q9EQZ6 1011 aa13.96□□□□□ -0.17
Chd3-202ENSMUST00000108661 Mphosph10Q810V0 681 aaKnown RBP13.96□□□□□ -0.18
Chd3-202ENSMUST00000108661 Cplx2P84086 134 aa13.96□□□□□ -0.18
Chd3-202ENSMUST00000108661 Arid4aF8VPQ2 1261 aaKnown RBP13.95□□□□□ -0.18
Chd3-202ENSMUST00000108661 TchhA0A0B4J1F9 1599 aa13.95□□□□□ -0.18
Chd3-202ENSMUST00000108661 EspnQ9ET47 871 aa13.95□□□□□ -0.18
Chd3-202ENSMUST00000108661 MpripP97434 1024 aa13.95□□□□□ -0.18
Chd3-202ENSMUST00000108661 Dapk1Q80YE7 1442 aa13.95□□□□□ -0.18
Chd3-202ENSMUST00000108661 Pde4bB1AWC9 736 aa13.94□□□□□ -0.18
Chd3-202ENSMUST00000108661 Ccdc43Q9CR29 222 aaKnown RBP13.94□□□□□ -0.18
Chd3-202ENSMUST00000108661 Trim34aQ99PP6 485 aa13.93□□□□□ -0.18
Chd3-202ENSMUST00000108661 Neo1P97798 1493 aa13.93□□□□□ -0.18
Chd3-202ENSMUST00000108661 Evc2Q8K1G2 1220 aa13.93□□□□□ -0.18
Chd3-202ENSMUST00000108661 Elp1Q7TT37 1333 aaKnown RBP13.93□□□□□ -0.18
Chd3-202ENSMUST00000108661 Abl1P00520 1123 aa13.93□□□□□ -0.18
Chd3-202ENSMUST00000108661 Gnai1B2RSH2 354 aa13.93□□□□□ -0.18
Chd3-202ENSMUST00000108661 Tpm4Q6IRU2 248 aa13.93□□□□□ -0.18
Chd3-202ENSMUST00000108661 Gnai3Q9DC51 354 aa13.93□□□□□ -0.18
Chd3-202ENSMUST00000108661 Sv2bQ8BG39 683 aa13.93□□□□□ -0.18
Chd3-202ENSMUST00000108661 MsnP26041 577 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms