RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Ddx54Q8K4L0 874 aaKnown RBP12.67□□□□□ -0.38
Scn9a-201ENSMUST00000100063 TatQ8QZR1 454 aa12.67□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Hdgfl1Q2VPR5 283 aa12.66□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Ccdc60Q8C4J0 545 aa12.66□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Fam193aQ8CGI1 1231 aaKnown RBP12.66□□□□□ -0.38
Scn9a-201ENSMUST00000100063 IkQ9Z1M8 557 aaKnown RBP12.66□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Ylpm1Q9R0I7 1386 aaKnown RBP12.65□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Gm10471E9Q1C7 252 aa12.65□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Evi5lH3BKQ3 813 aa12.65□□□□□ -0.38
Scn9a-201ENSMUST00000100063 ErbinQ80TH2 1402 aa12.65□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Sh3bgrQ9WUZ7 214 aa12.65□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Necab1Q8BG18 352 aa12.65□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Aebp2Q9Z248 504 aaKnown RBP12.65□□□□□ -0.38
Scn9a-201ENSMUST00000100063 Trim30aP15533 496 aa12.64□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Exoc6Q8R313 802 aa12.64□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Sycp1Q62209 993 aa12.64□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Hap1O35668 628 aa12.64□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Ccdc96Q9CR92 584 aa12.64□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Cc2d1aQ8K1A6 943 aa12.64□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Nap1l2P51860 460 aa12.63□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Gpatch11Q3UFS4 262 aa12.63□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Commd10Q8JZY2 202 aa12.63□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Erc2Q6PH08 957 aa12.63□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Slc4a3P16283 1227 aa12.63□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Zrsr2Q62377 462 aaKnown RBP12.63□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Supt16hQ920B9 1047 aa12.63□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Gsto1O09131 240 aa12.63□□□□□ -0.39
Scn9a-201ENSMUST00000100063 HmmrQ00547 794 aaKnown RBP12.62□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Zranb3Q6NZP1 1069 aa12.62□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Usp40Q8BWR4 1235 aa12.62□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Ttc5Q99LG4 440 aa12.62□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Me1P06801 572 aa12.62□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Cep89Q9CZX2 791 aa12.62□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Ehmt1Q5DW34 1296 aa12.61□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Cep162Q6ZQ06 1403 aa12.61□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Wdhd1P59328 1117 aa12.61□□□□□ -0.39
Scn9a-201ENSMUST00000100063 KinQ8K339 391 aa12.61□□□□□ -0.39
Scn9a-201ENSMUST00000100063 FanciQ8K368 1330 aa12.61□□□□□ -0.39
Scn9a-201ENSMUST00000100063 PnisrA2AJT4 805 aaKnown RBP12.6□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Ncbp1Q3UYV9 790 aaKnown RBP12.6□□□□□ -0.39
Scn9a-201ENSMUST00000100063 TefQ9JLC6 301 aa12.6□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Plekhd1B2RPU2 505 aa12.6□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Carmil1Q6EDY6 1374 aa12.6□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Abl1P00520 1123 aa12.6□□□□□ -0.39
Scn9a-201ENSMUST00000100063 G3bp1P97855 465 aaKnown RBP12.6□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Polr1aO35134 1717 aaKnown RBP12.6□□□□□ -0.39
Scn9a-201ENSMUST00000100063 GlmnQ8BZM1 596 aa12.59□□□□□ -0.39
Scn9a-201ENSMUST00000100063 GsdmaQ9EST1 446 aa12.59□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Gm21698A0A087WQP8 267 aa12.59□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Gm21671G3UY31 267 aa12.59□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Kif3aP28741 701 aa12.59□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Ripply1Q2WG77 201 aa12.59□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Rsph3aQ3UFY4 516 aa12.59□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Plagl1Q9JLQ4 704 aa12.59□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Gpatch3Q8BIY1 525 aa12.59□□□□□ -0.39
Scn9a-201ENSMUST00000100063 Wdr78E9PYY5 807 aa12.58□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Drc7Q6V3W6 876 aa12.58□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Glipr1l2Q9CQ35 332 aa12.58□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Mapk8ip1Q9WVI9 707 aa12.58□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Gcom1E9PZ54 550 aa12.58□□□□□ -0.4
Scn9a-201ENSMUST00000100063 MyzapQ3UIJ9 466 aa12.58□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Fam71e1A1L3C1 212 aa12.58□□□□□ -0.4
Scn9a-201ENSMUST00000100063 ZgpatQ8VDM1 511 aa12.57□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Nap1l1P28656 391 aaKnown RBP12.57□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Sel1lQ9Z2G6 790 aa12.57□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Fnbp4Q6ZQ03 1031 aa12.57□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Ell2Q3UKU1 639 aa12.57□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Fmnl2A2APV2 1086 aa12.57□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Ccdc34Q3UI66 367 aa12.57□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Smg6P61406 1418 aaKnown RBP12.57□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Bicd2Q921C5 820 aa12.57□□□□□ -0.4
Scn9a-201ENSMUST00000100063 NaspQ99MD9 773 aaKnown RBP12.57□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Agtpbp1Q641K1 1218 aa12.56□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Znf704Q9ERQ3 566 aa12.56□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Rufy1Q8BIJ7 712 aa12.56□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Rbm28Q8CGC6 750 aaKnown RBP12.56□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Zeb2Q9R0G7 1215 aa12.56□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Gtf2f1Q3THK3 508 aaKnown RBP12.56□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Pank3Q8R2W9 370 aa12.56□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Cfdp1O88271 295 aaKnown RBP12.55□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Bcl2l13P59017 434 aa12.55□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Smc2Q8CG48 1191 aaKnown RBP12.55□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Cc2d2bA0A286YDU8 1405 aa12.54□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Ripk4Q9ERK0 786 aa12.54□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Triml2E9PW10 424 aa12.54□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Kif7B7ZNG0 1348 aa12.54□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Mphosph10Q810V0 681 aaKnown RBP12.54□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Nsd2Q8BVE8 1365 aa12.54□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Gimap6Q8K349 305 aa12.54□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Usp16Q99LG0 825 aa12.53□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Gprasp1Q5U4C1 1347 aa12.53□□□□□ -0.4
Scn9a-201ENSMUST00000100063 OptnQ8K3K8 584 aa12.53□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Rock1P70335 1354 aa12.53□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Washc4Q3UMB9 1173 aa12.53□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Znhit6Q3UFB2 460 aaKnown RBP12.53□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Cfap99A0A140LIX9 648 aa12.53□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Trim34bJ3QNR8 485 aa12.53□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Cnnm1Q0GA42 951 aa12.53□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Kcnh8P59111 1102 aa12.53□□□□□ -0.4
Scn9a-201ENSMUST00000100063 Lrrc45Q8CIM1 670 aa12.52□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 69.2 ms