RNA–Protein interactions for RNA: ENSMUST00000089912.11

Casc4-202, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-202ENSMUST00000089912 Usp40Q8BWR4 1235 aa16.91■□□□□ 0.3
Casc4-202ENSMUST00000089912 Stk11ipQ3TAA7 1072 aa16.91■□□□□ 0.3
Casc4-202ENSMUST00000089912 Pde4cQ3UEI1 686 aa16.89■□□□□ 0.29
Casc4-202ENSMUST00000089912 Spag9Q58A65 1321 aaKnown RBP16.89■□□□□ 0.29
Casc4-202ENSMUST00000089912 Arid3cA6PWV5 409 aa16.89■□□□□ 0.29
Casc4-202ENSMUST00000089912 Adcy10Q8C0T9 1614 aa16.88■□□□□ 0.29
Casc4-202ENSMUST00000089912 RalgapbQ8BQZ4 1484 aa16.88■□□□□ 0.29
Casc4-202ENSMUST00000089912 Kdm3bQ6ZPY7 1562 aa16.88■□□□□ 0.29
Casc4-202ENSMUST00000089912 Kdm2bQ6P1G2 1309 aa16.87■□□□□ 0.29
Casc4-202ENSMUST00000089912 Rab3gap2Q8BMG7 1366 aa16.87■□□□□ 0.29
Casc4-202ENSMUST00000089912 Nectin2P32507 530 aa16.87■□□□□ 0.29
Casc4-202ENSMUST00000089912 Zmym4A2A791 1549 aaKnown RBP16.86■□□□□ 0.29
Casc4-202ENSMUST00000089912 Polr3aB2RXC6 1390 aa16.86■□□□□ 0.29
Casc4-202ENSMUST00000089912 Aplp1Q03157 653 aa16.85■□□□□ 0.29
Casc4-202ENSMUST00000089912 Magi3Q9EQJ9 1476 aa16.85■□□□□ 0.29
Casc4-202ENSMUST00000089912 IbspQ61711 324 aa16.85■□□□□ 0.29
Casc4-202ENSMUST00000089912 Rlbp1Q9Z275 317 aa16.85■□□□□ 0.29
Casc4-202ENSMUST00000089912 Dnajc5bQ9CQ94 199 aa16.84■□□□□ 0.29
Casc4-202ENSMUST00000089912 Jph4Q80WT0 628 aa16.84■□□□□ 0.29
Casc4-202ENSMUST00000089912 Exosc9Q9JHI7 438 aaKnown RBP16.84■□□□□ 0.29
Casc4-202ENSMUST00000089912 Supt6hQ62383 1726 aaKnown RBP16.84■□□□□ 0.29
Casc4-202ENSMUST00000089912 1700019A02RikA0A087WPV9 146 aa16.84■□□□□ 0.29
Casc4-202ENSMUST00000089912 Ppp1r3fQ9JIG4 799 aa16.83■□□□□ 0.29
Casc4-202ENSMUST00000089912 Zranb1Q7M760 708 aa16.83■□□□□ 0.28
Casc4-202ENSMUST00000089912 Pdcl3Q8BVF2 240 aa16.82■□□□□ 0.28
Casc4-202ENSMUST00000089912 Asxl1P59598 1514 aa16.82■□□□□ 0.28
Casc4-202ENSMUST00000089912 Trim44Q9QXA7 346 aa16.82■□□□□ 0.28
Casc4-202ENSMUST00000089912 Prex2Q3LAC4 1598 aa16.81■□□□□ 0.28
Casc4-202ENSMUST00000089912 Trim58Q5NCC9 485 aa16.81■□□□□ 0.28
Casc4-202ENSMUST00000089912 Tsen2Q6P7W5 460 aa16.81■□□□□ 0.28
Casc4-202ENSMUST00000089912 Gcc2Q8CHG3 1679 aa16.81■□□□□ 0.28
Casc4-202ENSMUST00000089912 Chmp4cQ9D7F7 232 aa16.81■□□□□ 0.28
Casc4-202ENSMUST00000089912 Atp7aQ64430 1491 aa16.81■□□□□ 0.28
Casc4-202ENSMUST00000089912 Duxf3A0A0N4SV92 674 aa16.81■□□□□ 0.28
Casc4-202ENSMUST00000089912 Ppp1r9bQ6R891 817 aaKnown RBP16.81■□□□□ 0.28
Casc4-202ENSMUST00000089912 Magi1Q6RHR9 1471 aa16.79■□□□□ 0.28
Casc4-202ENSMUST00000089912 GsdmaQ9EST1 446 aa16.79■□□□□ 0.28
Casc4-202ENSMUST00000089912 Disp1Q3TDN0 1521 aa16.79■□□□□ 0.28
Casc4-202ENSMUST00000089912 Ccdc60Q8C4J0 545 aa16.78■□□□□ 0.28
Casc4-202ENSMUST00000089912 Paxip1Q6NZQ4 1056 aa16.78■□□□□ 0.28
Casc4-202ENSMUST00000089912 Kcnn1Q9EQR3 537 aa16.78■□□□□ 0.28
Casc4-202ENSMUST00000089912 Abca5Q8K448 1642 aa16.77■□□□□ 0.28
Casc4-202ENSMUST00000089912 Setbp1Q9Z180 1582 aa16.77■□□□□ 0.27
Casc4-202ENSMUST00000089912 Trappc8E9PWG2 1437 aa16.77■□□□□ 0.27
Casc4-202ENSMUST00000089912 Arhgef12Q8R4H2 1543 aaKnown RBP16.76■□□□□ 0.27
Casc4-202ENSMUST00000089912 Ppp2r3aB2RXC8 1150 aa16.76■□□□□ 0.27
Casc4-202ENSMUST00000089912 Sptbn5F6UCX4 1208 aa16.76■□□□□ 0.27
Casc4-202ENSMUST00000089912 Znf316Q6PGE4 1016 aa16.76■□□□□ 0.27
Casc4-202ENSMUST00000089912 Fhod3Q76LL6 1578 aa16.75■□□□□ 0.27
Casc4-202ENSMUST00000089912 Ralbp1Q62172 648 aa16.75■□□□□ 0.27
Casc4-202ENSMUST00000089912 Rapgef6Q5NCJ1 1609 aa16.75■□□□□ 0.27
Casc4-202ENSMUST00000089912 Ssh1Q76I79 1042 aa16.75■□□□□ 0.27
Casc4-202ENSMUST00000089912 Fam163aQ8CAA5 168 aa16.75■□□□□ 0.27
Casc4-202ENSMUST00000089912 Ssh2Q5SW75 1423 aa16.75■□□□□ 0.27
Casc4-202ENSMUST00000089912 Ylpm1Q9R0I7 1386 aaKnown RBP16.75■□□□□ 0.27
Casc4-202ENSMUST00000089912 U2surpQ6NV83 1029 aaKnown RBP16.75■□□□□ 0.27
Casc4-202ENSMUST00000089912 Mbd5B1AYB6 1498 aa16.74■□□□□ 0.27
Casc4-202ENSMUST00000089912 Erich6bQ9D4S6 220 aa16.74■□□□□ 0.27
Casc4-202ENSMUST00000089912 Irx6Q9ER75 438 aa16.74■□□□□ 0.27
Casc4-202ENSMUST00000089912 Arhgap5P97393 1501 aa16.73■□□□□ 0.27
Casc4-202ENSMUST00000089912 Pibf1E9Q6K3 756 aa16.73■□□□□ 0.27
Casc4-202ENSMUST00000089912 Cog6Q8R3I3 657 aa16.73■□□□□ 0.27
Casc4-202ENSMUST00000089912 Lmod3E9QA62 571 aa16.73■□□□□ 0.27
Casc4-202ENSMUST00000089912 Map3k4O08648 1597 aa16.73■□□□□ 0.27
Casc4-202ENSMUST00000089912 Rabep1O35551 862 aa16.72■□□□□ 0.27
Casc4-202ENSMUST00000089912 Ccdc141E9Q8Q6 1531 aa16.72■□□□□ 0.27
Casc4-202ENSMUST00000089912 Ccdc146E9Q9F7 977 aa16.72■□□□□ 0.27
Casc4-202ENSMUST00000089912 Kif21aQ9QXL2 1672 aa16.72■□□□□ 0.27
Casc4-202ENSMUST00000089912 Catsper2A2ARP9 588 aa16.71■□□□□ 0.27
Casc4-202ENSMUST00000089912 Birc3O08863 600 aa16.7■□□□□ 0.26
Casc4-202ENSMUST00000089912 PtmaP26350 111 aa16.7■□□□□ 0.26
Casc4-202ENSMUST00000089912 Ccar1Q8CH18 1146 aaKnown RBP16.69■□□□□ 0.26
Casc4-202ENSMUST00000089912 Neo1P97798 1493 aa16.69■□□□□ 0.26
Casc4-202ENSMUST00000089912 Il4rP16382 810 aa16.69■□□□□ 0.26
Casc4-202ENSMUST00000089912 Fam135aQ6NS59 1506 aa16.68■□□□□ 0.26
Casc4-202ENSMUST00000089912 Cpsf1Q9EPU4 1441 aaKnown RBP16.68■□□□□ 0.26
Casc4-202ENSMUST00000089912 Shroom2A2ALU4 1481 aa16.68■□□□□ 0.26
Casc4-202ENSMUST00000089912 Puf60Q3UEB3 564 aaKnown RBP16.68■□□□□ 0.26
Casc4-202ENSMUST00000089912 IqubQ8CDK3 788 aa16.68■□□□□ 0.26
Casc4-202ENSMUST00000089912 Gtf2a1Q99PM3 378 aa16.68■□□□□ 0.26
Casc4-202ENSMUST00000089912 Dusp27Q148W8 1138 aa16.68■□□□□ 0.26
Casc4-202ENSMUST00000089912 Tfip11Q9ERA6 838 aaKnown RBP16.67■□□□□ 0.26
Casc4-202ENSMUST00000089912 Mink1Q9JM52 1308 aa16.67■□□□□ 0.26
Casc4-202ENSMUST00000089912 AU019823E9PUQ3 292 aa16.67■□□□□ 0.26
Casc4-202ENSMUST00000089912 AampJ3QN89 436 aa16.66■□□□□ 0.26
Casc4-202ENSMUST00000089912 TnikP83510 1323 aa16.66■□□□□ 0.26
Casc4-202ENSMUST00000089912 Uspl1Q3ULM6 1089 aa16.66■□□□□ 0.26
Casc4-202ENSMUST00000089912 Dmrtc1Q9D9R7 182 aa16.66■□□□□ 0.26
Casc4-202ENSMUST00000089912 Map7O88735 730 aa16.66■□□□□ 0.26
Casc4-202ENSMUST00000089912 Mrc2Q64449 1479 aa16.65■□□□□ 0.26
Casc4-202ENSMUST00000089912 Maco1Q7TQE6 664 aaKnown RBP16.65■□□□□ 0.26
Casc4-202ENSMUST00000089912 Cc2d1aQ8K1A6 943 aa16.64■□□□□ 0.25
Casc4-202ENSMUST00000089912 Mcm4P49717 862 aa16.64■□□□□ 0.25
Casc4-202ENSMUST00000089912 Kif18aQ91WD7 886 aa16.64■□□□□ 0.25
Casc4-202ENSMUST00000089912 Zfp777B9EKF4 885 aa16.63■□□□□ 0.25
Casc4-202ENSMUST00000089912 Arhgef11Q68FM7 1552 aa16.62■□□□□ 0.25
Casc4-202ENSMUST00000089912 Plppr3Q7TPB0 716 aa16.62■□□□□ 0.25
Casc4-202ENSMUST00000089912 Nsfl1cQ9CZ44 370 aaKnown RBP16.62■□□□□ 0.25
Casc4-202ENSMUST00000089912 Usp19Q3UJD6 1360 aa16.62■□□□□ 0.25
Casc4-202ENSMUST00000089912 Nek4Q9Z1J2 792 aa16.61■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms