RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Lmtk2Q3TYD6 1471 aa8.9□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Gm156Q58A37 223 aa8.89□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Mlh3A0A1Y7VMP7 1443 aa8.89□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Pik3c2gO70167 1506 aa8.89□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Kif16bB1AVY7 1312 aa8.89□□□□□ -0.99
Col6a6-201ENSMUST00000060896 CenpjQ569L8 1344 aa8.89□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Ttc21bQ0HA38 1315 aa8.89□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Ythdc2B2RR83 1445 aaKnown RBP8.89□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Tnnt1O88346 262 aa8.88□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Atp2b2Q9R0K7 1198 aa8.88□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Adcy10Q8C0T9 1614 aa8.88□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Atp7aQ64430 1491 aa8.88□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Map3k4O08648 1597 aa8.88□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Ssh2Q5SW75 1423 aa8.88□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Adamts12Q811B3 1600 aa8.88□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Wdr7Q920I9 1489 aa8.88□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Fancd2Q80V62 1450 aa8.87□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Nutm1Q8BHP2 1126 aa8.87□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Nectin2P32507 530 aa8.86□□□□□ -0.99
Col6a6-201ENSMUST00000060896 EspnQ9ET47 871 aa8.86□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Cep170Q6A065 1588 aa8.86□□□□□ -0.99
Col6a6-201ENSMUST00000060896 CatipB9EKE5 520 aa8.86□□□□□ -0.99
Col6a6-201ENSMUST00000060896 MlecQ6ZQI3 291 aaKnown RBP8.86□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Ccdc60Q8C4J0 545 aa8.86□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Stard8Q8K031 1019 aa8.85□□□□□ -0.99
Col6a6-201ENSMUST00000060896 DekQ7TNV0 380 aaKnown RBP8.85□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Mug2P28666 1451 aa8.85□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Atxn3Q9CVD2 355 aa8.85□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Polr3aB2RXC6 1390 aa8.85□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Cdk13Q69ZA1 1511 aaKnown RBP8.84□□□□□ -0.99
Col6a6-201ENSMUST00000060896 AI481877A2ALV5 1481 aa8.84□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Kdm3bQ6ZPY7 1562 aa8.84□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Kdm6bQ5NCY0 1641 aa8.84□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Abca5Q8K448 1642 aa8.84□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Caskin1Q6P9K8 1431 aa8.84□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Peg3Q3URU2 1571 aa8.84□□□□□ -0.99
Col6a6-201ENSMUST00000060896 Rab3gap2Q8BMG7 1366 aa8.83□□□□□ -1
Col6a6-201ENSMUST00000060896 Hsp90aa1P07901 733 aaKnown RBP8.83□□□□□ -1
Col6a6-201ENSMUST00000060896 Ccdc27Q3V036 639 aa8.83□□□□□ -1
Col6a6-201ENSMUST00000060896 Rrbp1Q99PL5 1605 aaKnown RBP8.83□□□□□ -1
Col6a6-201ENSMUST00000060896 Dennd4bQ3U1Y4 1499 aa8.83□□□□□ -1
Col6a6-201ENSMUST00000060896 Ttll13A4Q9F6 804 aa8.82□□□□□ -1
Col6a6-201ENSMUST00000060896 Dnmt1P13864 1620 aaKnown RBP8.82□□□□□ -1
Col6a6-201ENSMUST00000060896 NudcO35685 332 aaKnown RBP8.82□□□□□ -1
Col6a6-201ENSMUST00000060896 Mfap1aC0HKD8 439 aaKnown RBP8.82□□□□□ -1
Col6a6-201ENSMUST00000060896 Mfap1bC0HKD9 439 aaKnown RBP8.82□□□□□ -1
Col6a6-201ENSMUST00000060896 Gsto1O09131 240 aa8.82□□□□□ -1
Col6a6-201ENSMUST00000060896 GorabQ8BRM2 368 aa8.82□□□□□ -1
Col6a6-201ENSMUST00000060896 Cc2d1aQ8K1A6 943 aa8.82□□□□□ -1
Col6a6-201ENSMUST00000060896 Cabp4Q8VHC5 271 aa8.82□□□□□ -1
Col6a6-201ENSMUST00000060896 Ipo9Q91YE6 1041 aa8.82□□□□□ -1
Col6a6-201ENSMUST00000060896 Tspyl2Q7TQI8 677 aa8.81□□□□□ -1
Col6a6-201ENSMUST00000060896 Ccar1Q8CH18 1146 aaKnown RBP8.81□□□□□ -1
Col6a6-201ENSMUST00000060896 Mbd3Q9Z2D8 285 aaKnown RBP8.81□□□□□ -1
Col6a6-201ENSMUST00000060896 Asxl1P59598 1514 aa8.81□□□□□ -1
Col6a6-201ENSMUST00000060896 Abca16E9PWJ7 1678 aa8.81□□□□□ -1
Col6a6-201ENSMUST00000060896 Rtn4Q99P72 1162 aaKnown RBP8.81□□□□□ -1
Col6a6-201ENSMUST00000060896 Mapkbp1Q6NS57 1503 aa8.81□□□□□ -1
Col6a6-201ENSMUST00000060896 Dnai1Q8C0M8 701 aa8.8□□□□□ -1
Col6a6-201ENSMUST00000060896 AlkP97793 1621 aa8.8□□□□□ -1
Col6a6-201ENSMUST00000060896 Ralbp1Q62172 648 aa8.8□□□□□ -1
Col6a6-201ENSMUST00000060896 Ppm1gQ61074 542 aa8.8□□□□□ -1
Col6a6-201ENSMUST00000060896 Arhgef12Q8R4H2 1543 aaKnown RBP8.8□□□□□ -1
Col6a6-201ENSMUST00000060896 Cdk19Q8BWD8 501 aa8.8□□□□□ -1
Col6a6-201ENSMUST00000060896 Eif2s2Q99L45 331 aaKnown RBP8.8□□□□□ -1
Col6a6-201ENSMUST00000060896 PtprtQ99M80 1454 aa8.79□□□□□ -1
Col6a6-201ENSMUST00000060896 Rtf1A2AQ19 715 aaKnown RBP8.78□□□□□ -1
Col6a6-201ENSMUST00000060896 KarsQ99MN1 595 aaKnown RBP8.78□□□□□ -1
Col6a6-201ENSMUST00000060896 Prkrip1Q9CWV6 186 aaKnown RBP8.78□□□□□ -1
Col6a6-201ENSMUST00000060896 Iqcf3Q9D498 203 aa8.78□□□□□ -1
Col6a6-201ENSMUST00000060896 Arhgef11Q68FM7 1552 aa8.78□□□□□ -1
Col6a6-201ENSMUST00000060896 Abcc2Q8VI47 1543 aa8.78□□□□□ -1
Col6a6-201ENSMUST00000060896 Plcb2A3KGF7 1181 aa8.78□□□□□ -1
Col6a6-201ENSMUST00000060896 Dusp27Q148W8 1138 aa8.78□□□□□ -1
Col6a6-201ENSMUST00000060896 G3bp1P97855 465 aaKnown RBP8.77□□□□□ -1.01
Col6a6-201ENSMUST00000060896 HnrnpmQ9D0E1 729 aaKnown RBP8.77□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Sart3Q9JLI8 962 aaKnown RBP8.77□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Znf608Q56A10 1511 aa8.77□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Gm21190A0A0G2JGJ6 266 aa8.77□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Q3TQI7 289 aaKnown RBP8.77□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Ak7Q9D2H2 614 aa8.77□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Ccdc146E9Q9F7 977 aa8.77□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Cald1E9QA15 768 aaKnown RBP8.76□□□□□ -1.01
Col6a6-201ENSMUST00000060896 MpripP97434 1024 aa8.76□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Gas2l2Q5SSG4 860 aa8.76□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Ipo8Q7TMY7 1010 aa8.76□□□□□ -1.01
Col6a6-201ENSMUST00000060896 SphkapQ6NSW3 1687 aa8.76□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Asxl2Q8BZ32 1370 aa8.76□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Rbm25B2RY56 838 aaKnown RBP8.76□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Trim58Q5NCC9 485 aa8.76□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Stk31Q99MW1 1018 aa8.75□□□□□ -1.01
Col6a6-201ENSMUST00000060896 RalgapbQ8BQZ4 1484 aa8.75□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Naip6Q9JIB6 1403 aa8.75□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Plekhh1Q80TI1 1356 aa8.75□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Usp16Q99LG0 825 aa8.75□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Camsap2Q8C1B1 1461 aa8.74□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Liat1Q810M6 228 aa8.74□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Ap3b2Q9JME5 1082 aa8.74□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Ylpm1Q9R0I7 1386 aaKnown RBP8.74□□□□□ -1.01
Col6a6-201ENSMUST00000060896 Cabp2Q9JLK4 216 aa8.73□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 61.6 ms