RNA–Protein interactions for RNA: ENSMUST00000033544.13

Brcc3-201, Transcript of Lys-63-specific deubiquitinase BRCC36, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Brcc3, Length 4,310 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Brcc3-201ENSMUST00000033544 Mink1Q9JM52 1308 aa12.48□□□□□ -0.41
Brcc3-201ENSMUST00000033544 Mbd5B1AYB6 1498 aa12.48□□□□□ -0.41
Brcc3-201ENSMUST00000033544 GorabQ8BRM2 368 aa12.47□□□□□ -0.41
Brcc3-201ENSMUST00000033544 Plb1Q3TTY0 1478 aa12.47□□□□□ -0.41
Brcc3-201ENSMUST00000033544 Cd109Q8R422 1442 aa12.47□□□□□ -0.41
Brcc3-201ENSMUST00000033544 Nutm1Q8BHP2 1126 aa12.47□□□□□ -0.41
Brcc3-201ENSMUST00000033544 AknaQ80VW7 1404 aa12.47□□□□□ -0.41
Brcc3-201ENSMUST00000033544 TnikP83510 1323 aa12.47□□□□□ -0.41
Brcc3-201ENSMUST00000033544 Ppp1r3fQ9JIG4 799 aa12.47□□□□□ -0.41
Brcc3-201ENSMUST00000033544 Rab3gap2Q8BMG7 1366 aa12.46□□□□□ -0.41
Brcc3-201ENSMUST00000033544 Duxf3A0A0N4SV92 674 aa12.46□□□□□ -0.41
Brcc3-201ENSMUST00000033544 Ythdc1E9Q5K9 736 aaKnown RBP12.46□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Aplp1Q03157 653 aa12.46□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Q4VA45 678 aa12.46□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Stk11ipQ3TAA7 1072 aa12.46□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Sptbn5F6UCX4 1208 aa12.45□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Asxl1P59598 1514 aa12.45□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Arhgef12Q8R4H2 1543 aaKnown RBP12.45□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Magi3Q9EQJ9 1476 aa12.44□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Map3k4O08648 1597 aa12.44□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Il4rP16382 810 aa12.44□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Ssh1Q76I79 1042 aa12.44□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Srpk2O54781 681 aaKnown RBP12.44□□□□□ -0.42
Brcc3-201ENSMUST00000033544 U2af1Q9D883 239 aaKnown RBP12.44□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Gtf2e1Q9D0D5 440 aa12.43□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Trim44Q9QXA7 346 aa12.43□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Abca5Q8K448 1642 aa12.43□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Catsper2A2ARP9 588 aa12.42□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Trim58Q5NCC9 485 aa12.42□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Ppp2r3aB2RXC8 1150 aa12.42□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Map3k5O35099 1380 aa12.42□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Usp40Q8BWR4 1235 aa12.41□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Tmco5bQ80X59 307 aa12.41□□□□□ -0.42
Brcc3-201ENSMUST00000033544 AampJ3QN89 436 aa12.41□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Atp7aQ64430 1491 aa12.4□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Nectin2P32507 530 aa12.4□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Pde4cQ3UEI1 686 aa12.4□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Atp1b4Q99ME6 356 aa12.4□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Gtf2a1Q99PM3 378 aa12.4□□□□□ -0.42
Brcc3-201ENSMUST00000033544 Rabep1O35551 862 aa12.4□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Kif21bQ9QXL1 1668 aa12.4□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Prex2Q3LAC4 1598 aa12.39□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Cpsf1Q9EPU4 1441 aaKnown RBP12.39□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Mcm4P49717 862 aa12.38□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Spag9Q58A65 1321 aaKnown RBP12.38□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Zfp777B9EKF4 885 aa12.38□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Ylpm1Q9R0I7 1386 aaKnown RBP12.38□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Rapgef6Q5NCJ1 1609 aa12.37□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Ralbp1Q62172 648 aa12.37□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Plin1Q8CGN5 517 aa12.37□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Erich6bQ9D4S6 220 aa12.37□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Dmrtc1Q9D9R7 182 aa12.37□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Cog6Q8R3I3 657 aa12.36□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Ssh2Q5SW75 1423 aa12.36□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Magi1Q6RHR9 1471 aa12.36□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Stag3O70576 1240 aa12.36□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Nsfl1cQ9CZ44 370 aaKnown RBP12.36□□□□□ -0.43
Brcc3-201ENSMUST00000033544 GsdmaQ9EST1 446 aa12.36□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Tsen2Q6P7W5 460 aa12.35□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Zranb1Q7M760 708 aa12.35□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Rbm10Q99KG3 930 aaKnown RBP12.35□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Chmp4cQ9D7F7 232 aa12.35□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Kif3bQ61771 747 aa12.35□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Kdm5cP41230 1554 aa12.35□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Tex14Q7M6U3 1450 aa12.34□□□□□ -0.43
Brcc3-201ENSMUST00000033544 AU019823E9PUQ3 292 aa12.34□□□□□ -0.43
Brcc3-201ENSMUST00000033544 DmtnQ9WV69 405 aa12.34□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Usp19Q3UJD6 1360 aa12.34□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Uspl1Q3ULM6 1089 aa12.34□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Ccdc60Q8C4J0 545 aa12.34□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Trappc8E9PWG2 1437 aa12.34□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Pdlim2Q8R1G6 349 aa12.34□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Stk26Q99JT2 416 aa12.34□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Fam163aQ8CAA5 168 aa12.33□□□□□ -0.43
Brcc3-201ENSMUST00000033544 Tfip11Q9ERA6 838 aaKnown RBP12.33□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Ccdc141E9Q8Q6 1531 aa12.33□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Lamc1P02468 1607 aaKnown RBP12.33□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Jph4Q80WT0 628 aa12.33□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Phf14Q9D4H9 881 aa12.32□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Fam135aQ6NS59 1506 aa12.32□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Dot1lQ6XZL8 1540 aa12.32□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Lmod3E9QA62 571 aa12.32□□□□□ -0.44
Brcc3-201ENSMUST00000033544 NgefQ8CHT1 710 aa12.32□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Rrp9Q91WM3 475 aaKnown RBP12.32□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Ccdc146E9Q9F7 977 aa12.31□□□□□ -0.44
Brcc3-201ENSMUST00000033544 PtmaP26350 111 aa12.31□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Kif18aQ91WD7 886 aa12.31□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Kif21aQ9QXL2 1672 aa12.31□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Terf2O35144 541 aa12.3□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Arhgef11Q68FM7 1552 aa12.3□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Antxr1Q9CZ52 562 aa12.3□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Plch2A2AP18 1501 aa12.29□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Tbc1d32Q3URV1 1296 aa12.29□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Ccar1Q8CH18 1146 aaKnown RBP12.29□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Shroom2A2ALU4 1481 aa12.29□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Tarbp1E9Q368 1579 aa12.29□□□□□ -0.44
Brcc3-201ENSMUST00000033544 1700019A02RikA0A087WPV9 146 aa12.29□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Dusp27Q148W8 1138 aa12.29□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Exosc9Q9JHI7 438 aaKnown RBP12.29□□□□□ -0.44
Brcc3-201ENSMUST00000033544 Maco1Q7TQE6 664 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms