RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Polr3aB2RXC6 1390 aa14.14□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 Slc4a1apE9PX68 744 aa14.14□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 CrbnQ8C7D2 445 aa14.14□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 Apbb1Q9QXJ1 710 aa14.14□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 Cep170Q6A065 1588 aa14.12□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 Mak16Q8BGS0 296 aaKnown RBP14.12□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 Egfem1Q8C088 590 aa14.12□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 Stk24Q99KH8 431 aa14.12□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 PrxO55103 1391 aa14.12□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 Abca9Q8K449 1623 aa14.11□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 NeflP08551 543 aa14.11□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 Tarbp1E9Q368 1579 aa14.09□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 Cpsf1Q9EPU4 1441 aaKnown RBP14.09□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 Rock1P70335 1354 aa14.09□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 Zscan10Q3URR7 782 aa14.09□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 Robo2Q7TPD3 1470 aa14.09□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 Cnga1P29974 684 aa14.09□□□□□ -0.15
Ptcd1-201ENSMUST00000031628 Neurod2Q62414 383 aa14.08□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Gm156Q58A37 223 aa14.08□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Kif3bQ61771 747 aa14.08□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 B4galnt3Q6L8S8 986 aa14.08□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Srcin1Q9QWI6 1250 aa14.07□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Abca17E9PX95 1733 aa14.07□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Lemd3Q9WU40 921 aa14.07□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Dbr1Q923B1 550 aa14.06□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Usp54Q8BL06 1588 aaKnown RBP14.06□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Tcerg1Q8CGF7 1100 aaKnown RBP14.06□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 ShprhQ7TPQ3 1674 aa14.06□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Gm20521D3Z5F7 333 aa14.06□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Tmf1B9EKI3 1091 aa14.05□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Nos1Q9Z0J4 1429 aa14.05□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Xrn1P97789 1719 aaKnown RBP14.05□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Kif1bQ60575 1816 aaKnown RBP14.04□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Fan1Q69ZT1 1020 aa14.03□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Iqgap1Q9JKF1 1657 aaKnown RBP14.03□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Ppip5k1A2ARP1 1436 aa14.02□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Pdcl3Q8BVF2 240 aa14.02□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Nlrp6Q91WS2 869 aa14.02□□□□□ -0.16
Ptcd1-201ENSMUST00000031628 Edc4Q3UJB9 1406 aaKnown RBP14.02□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 ChgaP26339 463 aaKnown RBP14.02□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Rbm10Q99KG3 930 aaKnown RBP14.01□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 DmtnQ9WV69 405 aa14.01□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Ppp2r1aQ76MZ3 589 aa14.01□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Kdm5cP41230 1554 aa14.01□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Kank1E9Q238 1360 aa14□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Dcaf11Q91VU6 549 aa14□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Nsd2Q8BVE8 1365 aa14□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Ecm2Q5FW85 670 aa13.99□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Dnttip2Q8R2M2 758 aaKnown RBP13.99□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Ak9G3UYQ4 1894 aa13.99□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Fam184bQ0KK56 942 aa13.99□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 4933416C03RikQ3V063 378 aa13.98□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Speer4f1Q9D5Q6 258 aa13.98□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Znf518aB2RRF6 1478 aaKnown RBP13.97□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Kif16bB1AVY7 1312 aa13.97□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Myo5cE9Q1F5 1742 aa13.97□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Srpk2O54781 681 aaKnown RBP13.97□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Znf692Q3U381 531 aa13.97□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 OvosQ3UU35 1456 aa13.96□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Ylpm1Q9R0I7 1386 aaKnown RBP13.96□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Adamts13Q769J6 1426 aa13.96□□□□□ -0.17
Ptcd1-201ENSMUST00000031628 Kif7B7ZNG0 1348 aa13.96□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Usp40Q8BWR4 1235 aa13.96□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Gtf2e1Q9D0D5 440 aa13.95□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Chrna2Q91X60 512 aa13.94□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Polr3glQ8R0C0 218 aa13.94□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Ipo9Q91YE6 1041 aa13.94□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Zmym4A2A791 1549 aaKnown RBP13.94□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Fndc1E9Q043 1732 aa13.94□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Ttc21bQ0HA38 1315 aa13.93□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Adgrl3Q80TS3 1537 aa13.93□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Ttll13A4Q9F6 804 aa13.92□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Trim26Q99PN3 545 aa13.92□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Atp10aO54827 1508 aa13.92□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Rangap1P46061 589 aaKnown RBP13.92□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Gtf2a1Q99PM3 378 aa13.92□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Ptch1Q61115 1434 aa13.92□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Prkrip1Q9CWV6 186 aaKnown RBP13.92□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 AglF8VPN4 1532 aa13.92□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Tulp4Q9JIL5 1547 aa13.92□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 AnkarA2RT91 1465 aa13.91□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Tmem131lQ3U3D7 1597 aa13.91□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Armcx1Q9CX83 456 aa13.9□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Topbp1Q6ZQF0 1515 aa13.9□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 ArxO35085 564 aa13.9□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Vgll3P85442 326 aa13.9□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Gas2l2Q5SSG4 860 aa13.9□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Rwdd1Q9CQK7 243 aa13.9□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Abca6Q8K441 1624 aa13.9□□□□□ -0.18
Ptcd1-201ENSMUST00000031628 Tubgcp6G5E8P0 1769 aa13.89□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Rab3gap2Q8BMG7 1366 aa13.89□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Atp1b4Q99ME6 356 aa13.88□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Abcc6Q9R1S7 1498 aa13.88□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Plch2A2AP18 1501 aa13.87□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Depdc5P61460 1591 aa13.87□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Clasp1Q80TV8 1535 aaKnown RBP13.87□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Setd1aE9PYH6 1716 aa13.86□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Stag3O70576 1240 aa13.86□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 Ccdc30Q8BVF4 654 aa13.86□□□□□ -0.19
Ptcd1-201ENSMUST00000031628 ErbinQ80TH2 1402 aa13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms