RNA–Protein interactions for RNA: ENSMUST00000029446.12

Csde1-201, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Csde1, Length 4,318 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-201ENSMUST00000029446 Rangap1P46061 589 aaKnown RBP9.26□□□□□ -0.93
Csde1-201ENSMUST00000029446 Zfp777B9EKF4 885 aa9.26□□□□□ -0.93
Csde1-201ENSMUST00000029446 Pprc1Q6NZN1 1644 aa9.25□□□□□ -0.93
Csde1-201ENSMUST00000029446 Hsp90aa1P07901 733 aaKnown RBP9.24□□□□□ -0.93
Csde1-201ENSMUST00000029446 Znf518aB2RRF6 1478 aaKnown RBP9.24□□□□□ -0.93
Csde1-201ENSMUST00000029446 Usp54Q8BL06 1588 aaKnown RBP9.24□□□□□ -0.93
Csde1-201ENSMUST00000029446 Naip6Q9JIB6 1403 aa9.24□□□□□ -0.93
Csde1-201ENSMUST00000029446 Kif1bQ60575 1816 aaKnown RBP9.24□□□□□ -0.93
Csde1-201ENSMUST00000029446 Zfyve16Q80U44 1528 aa9.23□□□□□ -0.93
Csde1-201ENSMUST00000029446 Kif14L0N7N1 1674 aaKnown RBP9.23□□□□□ -0.93
Csde1-201ENSMUST00000029446 Stag3O70576 1240 aa9.23□□□□□ -0.93
Csde1-201ENSMUST00000029446 Vgll3P85442 326 aa9.23□□□□□ -0.93
Csde1-201ENSMUST00000029446 Fan1Q69ZT1 1020 aa9.23□□□□□ -0.93
Csde1-201ENSMUST00000029446 Mbd5B1AYB6 1498 aa9.22□□□□□ -0.93
Csde1-201ENSMUST00000029446 Cdk13Q69ZA1 1511 aaKnown RBP9.22□□□□□ -0.93
Csde1-201ENSMUST00000029446 Dot1lQ6XZL8 1540 aa9.22□□□□□ -0.93
Csde1-201ENSMUST00000029446 AcrbpQ3V140 540 aa9.22□□□□□ -0.93
Csde1-201ENSMUST00000029446 Pdcd11Q6NS46 1862 aaKnown RBP9.22□□□□□ -0.93
Csde1-201ENSMUST00000029446 Adgrl3Q80TS3 1537 aa9.21□□□□□ -0.93
Csde1-201ENSMUST00000029446 Slc4a3P16283 1227 aa9.21□□□□□ -0.93
Csde1-201ENSMUST00000029446 Usp40Q8BWR4 1235 aa9.21□□□□□ -0.94
Csde1-201ENSMUST00000029446 Pank3Q8R2W9 370 aa9.21□□□□□ -0.94
Csde1-201ENSMUST00000029446 Nos1Q9Z0J4 1429 aa9.21□□□□□ -0.94
Csde1-201ENSMUST00000029446 Upf2A2AT37 1269 aaKnown RBP9.2□□□□□ -0.94
Csde1-201ENSMUST00000029446 Safb2Q80YR5 991 aaKnown RBP9.2□□□□□ -0.94
Csde1-201ENSMUST00000029446 Cdc42bpbQ7TT50 1713 aa9.2□□□□□ -0.94
Csde1-201ENSMUST00000029446 Plch2A2AP18 1501 aa9.2□□□□□ -0.94
Csde1-201ENSMUST00000029446 Gli2Q0VGT2 1544 aa9.2□□□□□ -0.94
Csde1-201ENSMUST00000029446 Edc4Q3UJB9 1406 aaKnown RBP9.19□□□□□ -0.94
Csde1-201ENSMUST00000029446 Slc4a1apE9PX68 744 aa9.19□□□□□ -0.94
Csde1-201ENSMUST00000029446 Zscan21Q07231 555 aa9.19□□□□□ -0.94
Csde1-201ENSMUST00000029446 PnisrA2AJT4 805 aaKnown RBP9.19□□□□□ -0.94
Csde1-201ENSMUST00000029446 IbspQ61711 324 aa9.19□□□□□ -0.94
Csde1-201ENSMUST00000029446 Kidins220E9Q9B7 1793 aa9.19□□□□□ -0.94
Csde1-201ENSMUST00000029446 Abcc6Q9R1S7 1498 aa9.19□□□□□ -0.94
Csde1-201ENSMUST00000029446 Uggt2E9Q4X2 1504 aa9.19□□□□□ -0.94
Csde1-201ENSMUST00000029446 DekQ7TNV0 380 aaKnown RBP9.18□□□□□ -0.94
Csde1-201ENSMUST00000029446 Sall3Q62255 1320 aa9.18□□□□□ -0.94
Csde1-201ENSMUST00000029446 Znf710Q3U288 666 aa9.18□□□□□ -0.94
Csde1-201ENSMUST00000029446 Tarbp1E9Q368 1579 aa9.18□□□□□ -0.94
Csde1-201ENSMUST00000029446 Lmod3E9QA62 571 aa9.18□□□□□ -0.94
Csde1-201ENSMUST00000029446 Fam184bQ0KK56 942 aa9.18□□□□□ -0.94
Csde1-201ENSMUST00000029446 Inpp5dQ9ES52 1191 aa9.18□□□□□ -0.94
Csde1-201ENSMUST00000029446 Apbb1Q9QXJ1 710 aa9.18□□□□□ -0.94
Csde1-201ENSMUST00000029446 Zscan10Q3URR7 782 aa9.17□□□□□ -0.94
Csde1-201ENSMUST00000029446 Puf60Q3UEB3 564 aaKnown RBP9.17□□□□□ -0.94
Csde1-201ENSMUST00000029446 Hoxd11P23813 323 aa9.17□□□□□ -0.94
Csde1-201ENSMUST00000029446 Exosc9Q9JHI7 438 aaKnown RBP9.17□□□□□ -0.94
Csde1-201ENSMUST00000029446 Atp10aO54827 1508 aa9.16□□□□□ -0.94
Csde1-201ENSMUST00000029446 Slc4a2P13808 1237 aaKnown RBP9.16□□□□□ -0.94
Csde1-201ENSMUST00000029446 Trim26Q99PN3 545 aa9.16□□□□□ -0.94
Csde1-201ENSMUST00000029446 Ptch1Q61115 1434 aa9.16□□□□□ -0.94
Csde1-201ENSMUST00000029446 CenpjQ569L8 1344 aa9.16□□□□□ -0.94
Csde1-201ENSMUST00000029446 Ccdc27Q3V036 639 aa9.16□□□□□ -0.94
Csde1-201ENSMUST00000029446 4933402E13RikQ9D4D2 429 aa9.16□□□□□ -0.94
Csde1-201ENSMUST00000029446 Talpid3E9PV87 1520 aa9.15□□□□□ -0.94
Csde1-201ENSMUST00000029446 Mak16Q8BGS0 296 aaKnown RBP9.14□□□□□ -0.95
Csde1-201ENSMUST00000029446 Rbm10Q99KG3 930 aaKnown RBP9.14□□□□□ -0.95
Csde1-201ENSMUST00000029446 ShprhQ7TPQ3 1674 aa9.14□□□□□ -0.95
Csde1-201ENSMUST00000029446 Abca9Q8K449 1623 aa9.14□□□□□ -0.95
Csde1-201ENSMUST00000029446 Slc52a2Q9D8F3 450 aa9.14□□□□□ -0.95
Csde1-201ENSMUST00000029446 PrxO55103 1391 aa9.14□□□□□ -0.95
Csde1-201ENSMUST00000029446 Neurod2Q62414 383 aa9.14□□□□□ -0.95
Csde1-201ENSMUST00000029446 Stk26Q99JT2 416 aa9.13□□□□□ -0.95
Csde1-201ENSMUST00000029446 Synj2Q9D2G5 1434 aa9.13□□□□□ -0.95
Csde1-201ENSMUST00000029446 Cnga1P29974 684 aa9.13□□□□□ -0.95
Csde1-201ENSMUST00000029446 Dnttip2Q8R2M2 758 aaKnown RBP9.13□□□□□ -0.95
Csde1-201ENSMUST00000029446 Ak9G3UYQ4 1894 aa9.13□□□□□ -0.95
Csde1-201ENSMUST00000029446 Robo2Q7TPD3 1470 aa9.13□□□□□ -0.95
Csde1-201ENSMUST00000029446 Dcaf11Q91VU6 549 aa9.13□□□□□ -0.95
Csde1-201ENSMUST00000029446 Iqgap1Q9JKF1 1657 aaKnown RBP9.12□□□□□ -0.95
Csde1-201ENSMUST00000029446 Abca17E9PX95 1733 aa9.12□□□□□ -0.95
Csde1-201ENSMUST00000029446 Afap1Q80YS6 731 aa9.12□□□□□ -0.95
Csde1-201ENSMUST00000029446 Depdc5P61460 1591 aa9.12□□□□□ -0.95
Csde1-201ENSMUST00000029446 Shq1Q7TMX5 569 aa9.12□□□□□ -0.95
Csde1-201ENSMUST00000029446 AnkarA2RT91 1465 aa9.12□□□□□ -0.95
Csde1-201ENSMUST00000029446 Rpgrip1lQ8CG73 1264 aa9.11□□□□□ -0.95
Csde1-201ENSMUST00000029446 Tulp4Q9JIL5 1547 aa9.11□□□□□ -0.95
Csde1-201ENSMUST00000029446 Xrn1P97789 1719 aaKnown RBP9.1□□□□□ -0.95
Csde1-201ENSMUST00000029446 Tnnt2P50752 301 aa9.1□□□□□ -0.95
Csde1-201ENSMUST00000029446 Ipo4Q8VI75 1082 aa9.1□□□□□ -0.95
Csde1-201ENSMUST00000029446 Kif7B7ZNG0 1348 aa9.1□□□□□ -0.95
Csde1-201ENSMUST00000029446 AatkQ80YE4 1365 aa9.1□□□□□ -0.95
Csde1-201ENSMUST00000029446 AglF8VPN4 1532 aa9.09□□□□□ -0.95
Csde1-201ENSMUST00000029446 Sbno1Q689Z5 1390 aa9.09□□□□□ -0.95
Csde1-201ENSMUST00000029446 Dbr1Q923B1 550 aa9.09□□□□□ -0.95
Csde1-201ENSMUST00000029446 Kdm5cP41230 1554 aa9.09□□□□□ -0.95
Csde1-201ENSMUST00000029446 Psme1P97371 249 aa9.09□□□□□ -0.95
Csde1-201ENSMUST00000029446 Utp14aQ640M1 767 aaKnown RBP9.09□□□□□ -0.95
Csde1-201ENSMUST00000029446 Cdc42bpgQ80UW5 1551 aa9.09□□□□□ -0.95
Csde1-201ENSMUST00000029446 Txndc2Q6P902 515 aa9.09□□□□□ -0.95
Csde1-201ENSMUST00000029446 Abca6Q8K441 1624 aa9.09□□□□□ -0.95
Csde1-201ENSMUST00000029446 Rab3gap2Q8BMG7 1366 aa9.08□□□□□ -0.96
Csde1-201ENSMUST00000029446 CanxP35564 591 aaKnown RBP9.08□□□□□ -0.96
Csde1-201ENSMUST00000029446 Trim30dE9PWL0 497 aa9.08□□□□□ -0.96
Csde1-201ENSMUST00000029446 Nolc1E9Q5C9 702 aaKnown RBP9.08□□□□□ -0.96
Csde1-201ENSMUST00000029446 Supt16hQ920B9 1047 aa9.08□□□□□ -0.96
Csde1-201ENSMUST00000029446 Clasp1Q80TV8 1535 aaKnown RBP9.08□□□□□ -0.96
Csde1-201ENSMUST00000029446 Myo5cE9Q1F5 1742 aa9.08□□□□□ -0.96
Csde1-201ENSMUST00000029446 B4galnt3Q6L8S8 986 aa9.08□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms