RNA–Protein interactions for RNA: ENSMUST00000028224.14

Gapvd1-201, Transcript of GTPase-activating protein and VPS9 domain-containing protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gapvd1, Length 5,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gapvd1-201ENSMUST00000028224 Ccdc30Q8BVF4 654 aa22,38■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Phactr2B1AVP0 632 aa22,38■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Tpm2P58774 284 aa22,38■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Gtf3c3Q3TMP1 882 aa22,38■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Ddx11Q6AXC6 880 aa22,37■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Tpm4Q6IRU2 248 aa22,37■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Ubap1lG3UW59 384 aa22,37■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Polr3gQ6NXY9 223 aa22,36■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Gabpb2P81069 414 aa22,36■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Rpgrip1lQ8CG73 1264 aa22,36■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Rnf20Q5DTM8 973 aa22,36■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Ciz1Q8VEH2 845 aa22,36■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Ncoa2Q61026 1462 aa22,35■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Gnai1B2RSH2 354 aa22,35■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Rabep1O35551 862 aa22,35■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Gnai3Q9DC51 354 aa22,35■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Jph4Q80WT0 628 aa22,35■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Bicd2Q921C5 820 aa22,35■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Dhx16G3X8X0 1044 aaKnown RBP22,35■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Smarca2Q6DIC0 1577 aa22,34■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Soga1E1U8D0 1418 aa22,34■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Fyb1O35601 819 aa22,34■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Q9D2X8 372 aa22,34■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Gsto1O09131 240 aa22,33■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Cplx1P63040 134 aa22,33■■□□□ 1,17
Gapvd1-201ENSMUST00000028224 Ppm1fQ8CGA0 452 aa22,33■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Kif4P33174 1231 aa22,32■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Neurod6P48986 337 aa22,32■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Rec8Q8C5S7 591 aa22,32■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Ipo7Q9EPL8 1038 aaKnown RBP22,31■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Gripap1Q8VD04 806 aa22,31■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Nsd2Q8BVE8 1365 aa22,31■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Atl3Q91YH5 541 aa22,31■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Smc3Q9CW03 1217 aaKnown RBP22,31■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Drc7Q6V3W6 876 aa22,31■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Q8C5K5 320 aa22,31■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Pank1Q8K4K6 548 aa22,3■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Swt1Q9DBQ9 907 aa22,3■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 A0A1L1SQF0 893 aa22,3■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Rbm25B2RY56 838 aaKnown RBP22,3■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Gsdma3Q5Y4Y6 464 aa22,29■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Ankrd36D3Z4K0 1415 aa22,29■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Nectin2P32507 530 aa22,29■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 PhaxQ9JJT9 385 aaKnown RBP22,29■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Smarca4Q3TKT4 1613 aaKnown RBP22,29■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Hmox1P14901 289 aa22,29■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Ftsj3Q9DBE9 838 aaKnown RBP22,29■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Chmp4cQ9D7F7 232 aa22,29■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Pabpn1Q8CCS6 302 aaKnown RBP22,28■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 Erc2Q6PH08 957 aa22,27■■□□□ 1,16
Gapvd1-201ENSMUST00000028224 KarsQ99MN1 595 aaKnown RBP22,26■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Gprasp1Q5U4C1 1347 aa22,26■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Noc3lQ8VI84 807 aaKnown RBP22,26■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 CrcpO35427 148 aa22,26■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Cfdp1O88271 295 aaKnown RBP22,26■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Map7d2A2AG50 781 aa22,26■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Ttll5Q8CHB8 1328 aa22,25■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Puf60Q3UEB3 564 aaKnown RBP22,25■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Nutm1Q8BHP2 1126 aa22,25■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Ccp110Q7TSH4 1004 aa22,25■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Cetn4Q8K4K1 168 aa22,25■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Arid4aF8VPQ2 1261 aaKnown RBP22,24■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Odf2A3KGV1 830 aaKnown RBP22,24■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Cux1P53564 1515 aa22,24■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 PnisrA2AJT4 805 aaKnown RBP22,24■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Prkrip1Q9CWV6 186 aaKnown RBP22,23■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 FosbP13346 338 aa22,23■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Sv2bQ8BG39 683 aa22,22■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Pde4cQ3UEI1 686 aa22,22■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 NexnQ7TPW1 607 aa22,22■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Shroom4Q1W617 1475 aa22,21■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Nek4Q9Z1J2 792 aa22,21■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Cttnbp2B9EJA2 1648 aa22,21■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Mad1l1Q9WTX8 717 aaKnown RBP22,2■■□□□ 1,15
Gapvd1-201ENSMUST00000028224 Ccdc183A2AJB1 534 aa22,2■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Hook1Q8BIL5 728 aa22,2■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Atp2b2Q9R0K7 1198 aa22,2■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 PogkQ80TC5 607 aa22,2■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Gpatch3Q8BIY1 525 aa22,2■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Ccdc43Q9CR29 222 aaKnown RBP22,2■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 FanciQ8K368 1330 aa22,19■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Plekhh1Q80TI1 1356 aa22,19■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Cyp46a1Q9WVK8 500 aa22,19■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Bcl2l13P59017 434 aa22,19■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Hmgn5Q9JL35 406 aa22,18■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 BcanQ61361 883 aa22,18■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Samd1D3YXK1 519 aa22,18■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Taf3Q5HZG4 932 aa22,18■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Hnrnpul1Q8VDM6 859 aaKnown RBP22,17■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Q9D9H8 365 aa22,17■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 TatQ8QZR1 454 aa22,17■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Wdr78E9PYY5 807 aa22,17■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Fam193aQ8CGI1 1231 aaKnown RBP22,17■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Ccdc34Q3UI66 367 aa22,16■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Cchcr1Q8K2I2 770 aa22,16■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Zfp644E9QA22 1323 aa22,16■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Nol12Q8BG17 217 aa22,15■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Prdm16A2A935 1275 aa22,15■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Mphosph10Q810V0 681 aaKnown RBP22,15■■□□□ 1,14
Gapvd1-201ENSMUST00000028224 Vps8Q0P5W1 1427 aa22,14■■□□□ 1,14
Retrieved 100 of 22,080 RNA–protein pairs in 17,5 ms