RNA–Protein interactions for RNA: ENSMUST00000023206.13

Ercc4-201, Transcript of DNA repair endonuclease XPF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc4, Length 3,480 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4-201ENSMUST00000023206 Tnpo1Q8BFY9 898 aaKnown RBP15.36■□□□□ 0.05
Ercc4-201ENSMUST00000023206 Cd109Q8R422 1442 aa15.35■□□□□ 0.05
Ercc4-201ENSMUST00000023206 Magi1Q6RHR9 1471 aa15.35■□□□□ 0.05
Ercc4-201ENSMUST00000023206 Ccdc183A2AJB1 534 aa15.35■□□□□ 0.05
Ercc4-201ENSMUST00000023206 Map3k5O35099 1380 aa15.34■□□□□ 0.05
Ercc4-201ENSMUST00000023206 Ppp2r1aQ76MZ3 589 aa15.34■□□□□ 0.05
Ercc4-201ENSMUST00000023206 Jph4Q80WT0 628 aa15.34■□□□□ 0.05
Ercc4-201ENSMUST00000023206 Mfap1aC0HKD8 439 aaKnown RBP15.33■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Mfap1bC0HKD9 439 aaKnown RBP15.33■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Vgll3P85442 326 aa15.33■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Pank1Q8K4K6 548 aa15.33■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Erich6bQ9D4S6 220 aa15.32■□□□□ 0.04
Ercc4-201ENSMUST00000023206 RalgapbQ8BQZ4 1484 aa15.32■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Q4VA45 678 aa15.31■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Fan1Q69ZT1 1020 aa15.31■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Fam163aQ8CAA5 168 aa15.31■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Senp3Q9EP97 568 aaKnown RBP15.31■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Ccdc141E9Q8Q6 1531 aa15.31■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Ak9G3UYQ4 1894 aa15.31■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Cdc42bpaQ3UU96 1719 aa15.31■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Arhgef12Q8R4H2 1543 aaKnown RBP15.3■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Rfx1P48377 963 aa15.3■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Irf5P56477 497 aa15.3■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Kif7B7ZNG0 1348 aa15.3■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Pdia4P08003 638 aaKnown RBP15.3■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Fam184bQ0KK56 942 aa15.3■□□□□ 0.04
Ercc4-201ENSMUST00000023206 TimelessQ9R1X4 1197 aa15.3■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Kiaa1551Q5DTW7 1521 aa15.29■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Spag9Q58A65 1321 aaKnown RBP15.29■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Polr3aB2RXC6 1390 aa15.29■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Ccdc30Q8BVF4 654 aa15.28■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Map3k4O08648 1597 aa15.28■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Pde4cQ3UEI1 686 aa15.28■□□□□ 0.04
Ercc4-201ENSMUST00000023206 PogkQ80TC5 607 aa15.28■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Srpk2O54781 681 aaKnown RBP15.27■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Atp1b4Q99ME6 356 aa15.27■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Mbd5B1AYB6 1498 aa15.27■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Nectin2P32507 530 aa15.27■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Ssh1Q76I79 1042 aa15.27■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Golga2Q921M4 999 aa15.27■□□□□ 0.04
Ercc4-201ENSMUST00000023206 Gas2l2Q5SSG4 860 aa15.27■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Stard8Q8K031 1019 aa15.27■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Neo1P97798 1493 aa15.26■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Asxl1P59598 1514 aa15.26■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Trappc8E9PWG2 1437 aa15.26■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Rrp12Q6P5B0 1295 aaKnown RBP15.26■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Ppp1r9bQ6R891 817 aaKnown RBP15.26■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Phf14Q9D4H9 881 aa15.26■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Atp7aQ64430 1491 aa15.26■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Kif3bQ61771 747 aa15.26■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Mroh2aD3Z750 1679 aa15.25■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Arhgap5P97393 1501 aa15.25■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Ssh2Q5SW75 1423 aa15.25■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Arid3cA6PWV5 409 aa15.24■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Pnmal2G3X9N3 661 aa15.24■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Gtf2e1Q9D0D5 440 aa15.24■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Lrriq1Q0P5X1 1673 aa15.23■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Mapkbp1Q6NS57 1503 aa15.22■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Smc5Q8CG46 1101 aaKnown RBP15.22■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Zmym4A2A791 1549 aaKnown RBP15.22■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Atxn3Q9CVD2 355 aa15.22■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Mcm4P49717 862 aa15.22■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Znf330Q922H9 316 aa15.22■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Kdm2bQ6P1G2 1309 aa15.21■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Stk11ipQ3TAA7 1072 aa15.21■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Usp40Q8BWR4 1235 aa15.21■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Dusp27Q148W8 1138 aa15.21■□□□□ 0.03
Ercc4-201ENSMUST00000023206 Mbd3Q9Z2D8 285 aaKnown RBP15.2■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Lamc1P02468 1607 aaKnown RBP15.2■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Pbrm1Q8BSQ9 1634 aaKnown RBP15.19■□□□□ 0.02
Ercc4-201ENSMUST00000023206 GorabQ8BRM2 368 aa15.19■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Rab3gap2Q8BMG7 1366 aa15.18■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Mlh3A0A1Y7VMP7 1443 aa15.18■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Cpsf1Q9EPU4 1441 aaKnown RBP15.18■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Sptbn5F6UCX4 1208 aa15.18■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Catsper2A2ARP9 588 aa15.18■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Plekhh1Q80TI1 1356 aa15.17■□□□□ 0.02
Ercc4-201ENSMUST00000023206 PtmaP26350 111 aa15.17■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Stag3O70576 1240 aa15.17■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Ksr2Q3UVC0 959 aa15.16■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Plppr3Q7TPB0 716 aa15.16■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Apaf1O88879 1249 aa15.16■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Dot1lQ6XZL8 1540 aa15.16■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Mapk8ip3Q9ESN9 1337 aa15.16■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Cers3Q1A3B0 383 aa15.15■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Gtf3c5Q8R2T8 520 aa15.15■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Stk26Q99JT2 416 aa15.15■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Tnnt2P50752 301 aa15.15■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Fbxo2Q80UW2 297 aa15.15■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Pdlim2Q8R1G6 349 aa15.15■□□□□ 0.02
Ercc4-201ENSMUST00000023206 U2af1Q9D883 239 aaKnown RBP15.15■□□□□ 0.02
Ercc4-201ENSMUST00000023206 Kif21bQ9QXL1 1668 aa15.14■□□□□ 0.01
Ercc4-201ENSMUST00000023206 Dhx30Q99PU8 1217 aaKnown RBP15.14■□□□□ 0.01
Ercc4-201ENSMUST00000023206 Zcchc11B2RX14 1644 aaKnown RBP15.14■□□□□ 0.01
Ercc4-201ENSMUST00000023206 Dmrtc1Q9D9R7 182 aa15.12■□□□□ 0.01
Ercc4-201ENSMUST00000023206 Ubap1lG3UW59 384 aa15.12■□□□□ 0.01
Ercc4-201ENSMUST00000023206 Rlbp1Q9Z275 317 aa15.12■□□□□ 0.01
Ercc4-201ENSMUST00000023206 Tarbp1E9Q368 1579 aa15.12■□□□□ 0.01
Ercc4-201ENSMUST00000023206 Caskin1Q6P9K8 1431 aa15.11■□□□□ 0.01
Ercc4-201ENSMUST00000023206 Kdm5cP41230 1554 aa15.1■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms