RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C PEF1P53238 335 aa7.51□□□□□ -1.21
RPD3YNL330C SKO1Q02100 647 aa7.51□□□□□ -1.21
RPD3YNL330C GIS1Q03833 894 aa7.51□□□□□ -1.21
RPD3YNL330C YDR387CQ04162 555 aa7.51□□□□□ -1.21
RPD3YNL330C HRI1Q05905 244 aaKnown RBP7.51□□□□□ -1.21
RPD3YNL330C YOR015WQ12169 119 aa7.51□□□□□ -1.21
RPD3YNL330C AGC1Q12482 902 aa7.51□□□□□ -1.21
RPD3YNL330C HUT1Q12520 339 aa7.51□□□□□ -1.21
RPD3YNL330C SPS4P09937 338 aa7.5□□□□□ -1.21
RPD3YNL330C LAC1P28496 418 aa7.5□□□□□ -1.21
RPD3YNL330C ERG2P32352 222 aa7.5□□□□□ -1.21
RPD3YNL330C MNS1P32906 549 aa7.5□□□□□ -1.21
RPD3YNL330C RFC2P40348 353 aa7.5□□□□□ -1.21
RPD3YNL330C ATF1P40353 525 aa7.5□□□□□ -1.21
RPD3YNL330C PAU15P40585 124 aa7.5□□□□□ -1.21
RPD3YNL330C YNL165WP53891 406 aa7.5□□□□□ -1.21
RPD3YNL330C YMR090WQ04304 227 aaKnown RBP7.5□□□□□ -1.21
RPD3YNL330C YLR456WQ06199 204 aa7.5□□□□□ -1.21
RPD3YNL330C YIL046W-AQ3E7Z4 54 aa7.5□□□□□ -1.21
RPD3YNL330C YOR032W-AQ8TGS1 66 aa7.5□□□□□ -1.21
RPD3YNL330C SEC59P20048 519 aa7.49□□□□□ -1.21
RPD3YNL330C MAK32P23060 363 aa7.49□□□□□ -1.21
RPD3YNL330C SOF1P33750 489 aaKnown RBP7.49□□□□□ -1.21
RPD3YNL330C AIM3P38266 947 aaKnown RBP7.49□□□□□ -1.21
RPD3YNL330C YPT31P38555 223 aaKnown RBP7.49□□□□□ -1.21
RPD3YNL330C YGL262WP53054 175 aa7.49□□□□□ -1.21
RPD3YNL330C PCP1P53259 346 aa7.49□□□□□ -1.21
RPD3YNL330C MSO1P53604 210 aaKnown RBP7.49□□□□□ -1.21
RPD3YNL330C FYV6P53913 173 aa7.49□□□□□ -1.21
RPD3YNL330C RSM10Q03201 203 aa7.49□□□□□ -1.21
RPD3YNL330C SDC1Q03323 175 aa7.49□□□□□ -1.21
RPD3YNL330C YOR186WQ08560 144 aa7.49□□□□□ -1.21
RPD3YNL330C YOR376WQ08900 122 aa7.49□□□□□ -1.21
RPD3YNL330C RPS16AP0CX51 143 aaKnown RBP7.48□□□□□ -1.21
RPD3YNL330C RPS16BP0CX52 143 aaKnown RBP7.48□□□□□ -1.21
RPD3YNL330C FRS1P15624 595 aaKnown RBP7.48□□□□□ -1.21
RPD3YNL330C POF1P25576 258 aa7.48□□□□□ -1.21
RPD3YNL330C NTF2P33331 125 aaKnown RBP7.48□□□□□ -1.21
RPD3YNL330C TRS20P38334 175 aa7.48□□□□□ -1.21
RPD3YNL330C PEX7P39108 375 aa7.48□□□□□ -1.21
RPD3YNL330C SEN34P39707 275 aa7.48□□□□□ -1.21
RPD3YNL330C SMD3P43321 101 aaKnown RBP7.48□□□□□ -1.21
RPD3YNL330C OCA1P50946 238 aaPredicted RBP7.48□□□□□ -1.21
RPD3YNL330C MGA1P53050 456 aa7.48□□□□□ -1.21
RPD3YNL330C HED1Q03937 162 aa7.48□□□□□ -1.21
RPD3YNL330C RFU1Q08003 200 aa7.48□□□□□ -1.21
RPD3YNL330C RAD28Q12021 506 aa7.48□□□□□ -1.21
RPD3YNL330C YPR108W-AQ3E7B3 70 aa7.48□□□□□ -1.21
RPD3YNL330C COA2Q3E823 68 aa7.48□□□□□ -1.21
RPD3YNL330C YDR157WA0A023PZE8 133 aa7.47□□□□□ -1.21
RPD3YNL330C RPL25P04456 142 aaKnown RBP7.47□□□□□ -1.21
RPD3YNL330C MDH2P22133 377 aa7.47□□□□□ -1.21
RPD3YNL330C MRS4P23500 304 aa7.47□□□□□ -1.21
RPD3YNL330C ERG8P24521 451 aa7.47□□□□□ -1.21
RPD3YNL330C POP5P28005 173 aa7.47□□□□□ -1.21
RPD3YNL330C RPB7P34087 171 aa7.47□□□□□ -1.21
RPD3YNL330C MRPS9P38120 278 aa7.47□□□□□ -1.21
RPD3YNL330C AVT5P38176 459 aa7.47□□□□□ -1.21
RPD3YNL330C PAC2P39937 518 aa7.47□□□□□ -1.21
RPD3YNL330C YER158CP40095 573 aa7.47□□□□□ -1.21
RPD3YNL330C CCS1P40202 249 aaKnown RBP7.47□□□□□ -1.21
RPD3YNL330C DUG1P43616 481 aaKnown RBP7.47□□□□□ -1.21
RPD3YNL330C TEX1P53851 422 aaKnown RBP7.47□□□□□ -1.21
RPD3YNL330C ARL3Q02804 198 aa7.47□□□□□ -1.21
RPD3YNL330C TRS23Q03784 219 aa7.47□□□□□ -1.21
RPD3YNL330C HOF1Q05080 669 aa7.47□□□□□ -1.21
RPD3YNL330C TDA6Q06466 467 aa7.47□□□□□ -1.21
RPD3YNL330C PAM18Q07914 168 aa7.47□□□□□ -1.21
RPD3YNL330C FCY22Q12119 530 aa7.47□□□□□ -1.21
RPD3YNL330C YLR118CQ12354 227 aa7.47□□□□□ -1.21
RPD3YNL330C POL2P21951 2222 aaKnown RBP7.47□□□□□ -1.21
RPD3YNL330C BRR2P32639 2163 aaKnown RBP7.46□□□□□ -1.21
RPD3YNL330C DEG1P31115 442 aaKnown RBP7.46□□□□□ -1.22
RPD3YNL330C YUH1P35127 236 aa7.46□□□□□ -1.22
RPD3YNL330C YBR013CP38215 129 aa7.46□□□□□ -1.22
RPD3YNL330C WSS1P38838 269 aa7.46□□□□□ -1.22
RPD3YNL330C PHS1P40857 217 aa7.46□□□□□ -1.22
RPD3YNL330C HNT2P49775 206 aa7.46□□□□□ -1.22
RPD3YNL330C ATG21Q02887 496 aa7.46□□□□□ -1.22
RPD3YNL330C TSA2Q04120 196 aa7.46□□□□□ -1.22
RPD3YNL330C MIX14Q04341 121 aa7.46□□□□□ -1.22
RPD3YNL330C FSH2Q05015 223 aa7.46□□□□□ -1.22
RPD3YNL330C YLR179CQ06252 201 aaKnown RBP7.46□□□□□ -1.22
RPD3YNL330C YDL242WQ07746 117 aa7.46□□□□□ -1.22
RPD3YNL330C THI72Q08579 599 aa7.46□□□□□ -1.22
RPD3YNL330C ERV1P27882 189 aa7.45□□□□□ -1.22
RPD3YNL330C UPS2P35200 230 aa7.45□□□□□ -1.22
RPD3YNL330C YNK1P36010 153 aaKnown RBP7.45□□□□□ -1.22
RPD3YNL330C PRS2P38620 318 aaKnown RBP7.45□□□□□ -1.22
RPD3YNL330C FLO5P38894 1075 aa7.45□□□□□ -1.22
RPD3YNL330C BNS1P50084 137 aa7.45□□□□□ -1.22
RPD3YNL330C PAU4P53427 120 aa7.45□□□□□ -1.22
RPD3YNL330C YPL108WQ02872 168 aaPredicted RBP7.45□□□□□ -1.22
RPD3YNL330C CTR3Q06686 241 aa7.45□□□□□ -1.22
RPD3YNL330C ALG6Q12001 544 aaKnown RBP7.45□□□□□ -1.22
RPD3YNL330C AKR2Q12013 749 aa7.45□□□□□ -1.22
RPD3YNL330C FRE8Q12209 686 aa7.45□□□□□ -1.22
RPD3YNL330C PRR2Q12310 699 aa7.45□□□□□ -1.22
RPD3YNL330C IZH2Q12442 317 aa7.45□□□□□ -1.22
RPD3YNL330C HUG1Q6Q5K6 68 aa7.45□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms