RNA–Protein interactions for RNA: YMR172C-A

YMR172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YMR172C-A, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR172C-AYMR172C-A YEL008WP40001 126 aa-0.51□□□□□ -2.49
YMR172C-AYMR172C-A GVP36P40531 326 aaKnown RBP-0.51□□□□□ -2.49
YMR172C-AYMR172C-A YRA1Q12159 226 aaKnown RBP-0.51□□□□□ -2.49
YMR172C-AYMR172C-A COA3Q3E7B2 85 aa-0.51□□□□□ -2.49
YMR172C-AYMR172C-A STF1P01098 86 aa-0.52□□□□□ -2.49
YMR172C-AYMR172C-A YLR156WP0CE96 114 aa-0.52□□□□□ -2.49
YMR172C-AYMR172C-A YLR159WP0CE97 114 aa-0.52□□□□□ -2.49
YMR172C-AYMR172C-A YLR161WP0CE98 114 aa-0.52□□□□□ -2.49
YMR172C-AYMR172C-A POP4P38336 279 aa-0.52□□□□□ -2.49
YMR172C-AYMR172C-A LPP1Q04396 274 aa-0.52□□□□□ -2.49
YMR172C-AYMR172C-A YLR413WQ06689 675 aa-0.52□□□□□ -2.49
YMR172C-AYMR172C-A PRM3Q08931 133 aa-0.52□□□□□ -2.49
YMR172C-AYMR172C-A YIL002W-AQ3E7Z5 69 aa-0.52□□□□□ -2.49
YMR172C-AYMR172C-A DAL82P21705 255 aa-0.53□□□□□ -2.49
YMR172C-AYMR172C-A RPT5P33297 434 aaKnown RBP-0.53□□□□□ -2.49
YMR172C-AYMR172C-A MRPL15P36523 253 aa-0.53□□□□□ -2.49
YMR172C-AYMR172C-A YBR285WP38354 144 aa-0.53□□□□□ -2.49
YMR172C-AYMR172C-A DOG2P38773 246 aa-0.53□□□□□ -2.49
YMR172C-AYMR172C-A VMA22P38784 181 aa-0.53□□□□□ -2.49
YMR172C-AYMR172C-A IRC22P40006 225 aa-0.53□□□□□ -2.49
YMR172C-AYMR172C-A YPR174CQ06616 221 aaPredicted RBP-0.53□□□□□ -2.49
YMR172C-AYMR172C-A REX3Q12090 404 aa-0.53□□□□□ -2.49
YMR172C-AYMR172C-A TIM9O74700 87 aa-0.54□□□□□ -2.5
YMR172C-AYMR172C-A MSF1P08425 469 aa-0.54□□□□□ -2.5
YMR172C-AYMR172C-A CDC10P25342 322 aaKnown RBP-0.54□□□□□ -2.5
YMR172C-AYMR172C-A AHT1P29589 182 aa-0.54□□□□□ -2.5
YMR172C-AYMR172C-A ECM4P36156 370 aa-0.54□□□□□ -2.5
YMR172C-AYMR172C-A YAR064WP39563 99 aa-0.54□□□□□ -2.5
YMR172C-AYMR172C-A YPL073CP40323 161 aa-0.54□□□□□ -2.5
YMR172C-AYMR172C-A CCW12Q12127 133 aa-0.54□□□□□ -2.5
YMR172C-AYMR172C-A LSO2Q3E772 92 aaKnown RBP-0.54□□□□□ -2.5
YMR172C-AYMR172C-A YPL229WQ99395 206 aa-0.54□□□□□ -2.5
YMR172C-AYMR172C-A COX2P00410 251 aa-0.55□□□□□ -2.5
YMR172C-AYMR172C-A SKG1P36169 355 aa-0.55□□□□□ -2.5
YMR172C-AYMR172C-A DID2P69771 204 aa-0.55□□□□□ -2.5
YMR172C-AYMR172C-A YDR391CQ04170 232 aa-0.55□□□□□ -2.5
YMR172C-AYMR172C-A YMR226CQ05016 267 aaKnown RBP-0.55□□□□□ -2.5
YMR172C-AYMR172C-A YLR126CQ12288 251 aa-0.55□□□□□ -2.5
YMR172C-AYMR172C-A UBC8P28263 218 aa-0.56□□□□□ -2.5
YMR172C-AYMR172C-A YHL037CP38733 133 aa-0.56□□□□□ -2.5
YMR172C-AYMR172C-A HPA3P39979 161 aa-0.56□□□□□ -2.5
YMR172C-AYMR172C-A YER034WP40022 185 aaKnown RBP-0.56□□□□□ -2.5
YMR172C-AYMR172C-A YPR203WQ08994 102 aa-0.56□□□□□ -2.5
YMR172C-AYMR172C-A BTS1Q12051 335 aa-0.56□□□□□ -2.5
YMR172C-AYMR172C-A RPL24AP04449 155 aaKnown RBP-0.57□□□□□ -2.5
YMR172C-AYMR172C-A TPM1P17536 199 aaKnown RBP-0.57□□□□□ -2.5
YMR172C-AYMR172C-A YFL051CP43552 160 aa-0.57□□□□□ -2.5
YMR172C-AYMR172C-A UPS3Q04006 179 aa-0.57□□□□□ -2.5
YMR172C-AYMR172C-A COX20Q04935 205 aa-0.57□□□□□ -2.5
YMR172C-AYMR172C-A SRB4P32569 687 aa-0.58□□□□□ -2.5
YMR172C-AYMR172C-A RPB7P34087 171 aa-0.58□□□□□ -2.5
YMR172C-AYMR172C-A TVP23P38962 199 aa-0.58□□□□□ -2.5
YMR172C-AYMR172C-A EMC2P47133 292 aaKnown RBP-0.58□□□□□ -2.5
YMR172C-AYMR172C-A CSM4Q08955 156 aa-0.58□□□□□ -2.5
YMR172C-AYMR172C-A YIL177CP40434 1758 aa-0.59□□□□□ -2.5
YMR172C-AYMR172C-A YJL225CP40889 1758 aa-0.59□□□□□ -2.5
YMR172C-AYMR172C-A DAL80P26343 269 aa-0.59□□□□□ -2.5
YMR172C-AYMR172C-A YKL075CP36083 450 aa-0.59□□□□□ -2.5
YMR172C-AYMR172C-A EGD1Q02642 157 aaKnown RBP-0.59□□□□□ -2.5
YMR172C-AYMR172C-A BNA7Q04066 261 aa-0.59□□□□□ -2.5
YMR172C-AYMR172C-A ODC2Q99297 307 aa-0.59□□□□□ -2.5
YMR172C-AYMR172C-A YAR1P46683 200 aa-0.6□□□□□ -2.51
YMR172C-AYMR172C-A YDR274CP87283 123 aa-0.6□□□□□ -2.51
YMR172C-AYMR172C-A FYV12Q08559 129 aa-0.6□□□□□ -2.51
YMR172C-AYMR172C-A DRS2P39524 1355 aa-0.6□□□□□ -2.51
YMR172C-AYMR172C-A PRM8P53174 237 aa-0.61□□□□□ -2.51
YMR172C-AYMR172C-A MCP1Q12106 302 aa-0.61□□□□□ -2.51
YMR172C-AYMR172C-A TDA8Q6B2U8 126 aa-0.61□□□□□ -2.51
YMR172C-AYMR172C-A MGM101P32787 269 aaKnown RBP-0.62□□□□□ -2.51
YMR172C-AYMR172C-A YBR242WP38331 238 aa-0.62□□□□□ -2.51
YMR172C-AYMR172C-A DCV1P43595 202 aa-0.62□□□□□ -2.51
YMR172C-AYMR172C-A YJR111CP47148 283 aaKnown RBP-0.62□□□□□ -2.51
YMR172C-AYMR172C-A MCM22P47167 239 aa-0.62□□□□□ -2.51
YMR172C-AYMR172C-A MET31Q03081 177 aa-0.62□□□□□ -2.51
YMR172C-AYMR172C-A URA5P13298 226 aaKnown RBP-0.63□□□□□ -2.51
YMR172C-AYMR172C-A POL30P15873 258 aaKnown RBP-0.63□□□□□ -2.51
YMR172C-AYMR172C-A DBP3P20447 523 aaKnown RBP-0.63□□□□□ -2.51
YMR172C-AYMR172C-A NSA1P53136 463 aaPredicted RBP-0.63□□□□□ -2.51
YMR172C-AYMR172C-A SDO1Q07953 250 aaKnown RBP-0.63□□□□□ -2.51
YMR172C-AYMR172C-A YHR213W-BQ8TGK1 99 aa-0.63□□□□□ -2.51
YMR172C-AYMR172C-A RPL27AP0C2H6 136 aaKnown RBP-0.64□□□□□ -2.51
YMR172C-AYMR172C-A YHL018WP38744 120 aaPredicted RBP-0.64□□□□□ -2.51
YMR172C-AYMR172C-A GCN20P43535 752 aaKnown RBP-0.64□□□□□ -2.51
YMR172C-AYMR172C-A YJR149WP47177 404 aa-0.64□□□□□ -2.51
YMR172C-AYMR172C-A DAD4P69851 72 aa-0.64□□□□□ -2.51
YMR172C-AYMR172C-A LAP3Q01532 483 aaKnown RBP RIP-Chip data-0.64□□□□□ -2.51not detected
YMR172C-AYMR172C-A COX8P04039 78 aa-0.65□□□□□ -2.51
YMR172C-AYMR172C-A TCP1P12612 559 aaKnown RBP-0.65□□□□□ -2.51
YMR172C-AYMR172C-A BET1P22804 142 aa-0.65□□□□□ -2.51
YMR172C-AYMR172C-A SPO13P23624 291 aa-0.65□□□□□ -2.51
YMR172C-AYMR172C-A SEC17P32602 292 aa-0.65□□□□□ -2.51
YMR172C-AYMR172C-A PET100P38958 111 aa-0.65□□□□□ -2.51
YMR172C-AYMR172C-A TRM9P49957 279 aa-0.65□□□□□ -2.51
YMR172C-AYMR172C-A NUP84P52891 726 aa-0.65□□□□□ -2.51
YMR172C-AYMR172C-A FIT1Q04433 528 aa-0.65□□□□□ -2.51
YMR172C-AYMR172C-A PRP11Q07350 266 aaPredicted RBP-0.65□□□□□ -2.51
YMR172C-AYMR172C-A FIT2Q08906 153 aa-0.65□□□□□ -2.51
YMR172C-AYMR172C-A YPR013CQ12145 317 aa-0.65□□□□□ -2.51
YMR172C-AYMR172C-A KRR1P25586 316 aaPredicted RBP-0.66□□□□□ -2.52
YMR172C-AYMR172C-A RTT105P40063 208 aa-0.66□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms