RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C OKP1P53298 406 aa2.45□□□□□ -2.02
SDO1YLR022C RSM27P53305 110 aa2.45□□□□□ -2.02
SDO1YLR022C BIO4P53630 237 aa2.45□□□□□ -2.02
SDO1YLR022C SLT2Q00772 484 aa2.45□□□□□ -2.02
SDO1YLR022C YMR010WQ03687 405 aa2.45□□□□□ -2.02
SDO1YLR022C YMR166CQ03829 368 aa2.45□□□□□ -2.02
SDO1YLR022C TSA2Q04120 196 aa2.45□□□□□ -2.02
SDO1YLR022C PBP4Q07362 185 aaKnown RBP2.45□□□□□ -2.02
SDO1YLR022C YET3Q07451 203 aa2.45□□□□□ -2.02
SDO1YLR022C LOT6Q07923 191 aa2.45□□□□□ -2.02
SDO1YLR022C HTZ1Q12692 134 aaKnown RBP2.45□□□□□ -2.02
SDO1YLR022C TDH2P00358 332 aaKnown RBP2.44□□□□□ -2.02
SDO1YLR022C ATP6P00854 259 aa2.44□□□□□ -2.02
SDO1YLR022C CAP2P13517 287 aa2.44□□□□□ -2.02
SDO1YLR022C FAR1P21268 830 aa2.44□□□□□ -2.02
SDO1YLR022C PRS4P38063 326 aaPredicted RBP2.44□□□□□ -2.02
SDO1YLR022C ETR1P38071 380 aa2.44□□□□□ -2.02
SDO1YLR022C HCH1P53834 153 aa2.44□□□□□ -2.02
SDO1YLR022C ASI3P53983 676 aa2.44□□□□□ -2.02
SDO1YLR022C YDR476CQ03362 224 aa2.44□□□□□ -2.02
SDO1YLR022C SDO1Q07953 250 aaKnown RBP2.44□□□□□ -2.02
SDO1YLR022C YOL019WQ08157 551 aa2.44□□□□□ -2.02
SDO1YLR022C BRX1Q08235 291 aaKnown RBP2.44□□□□□ -2.02
SDO1YLR022C RRS1Q08746 203 aaKnown RBP2.44□□□□□ -2.02
SDO1YLR022C HMS1Q12398 434 aa2.44□□□□□ -2.02
SDO1YLR022C YOR343CQ12484 108 aa2.44□□□□□ -2.02
SDO1YLR022C YHR212W-AP0CX91 67 aa2.43□□□□□ -2.02
SDO1YLR022C ZRC1P20107 442 aa2.43□□□□□ -2.02
SDO1YLR022C HSP30P25619 332 aa2.43□□□□□ -2.02
SDO1YLR022C ASF2P32448 525 aaPredicted RBP2.43□□□□□ -2.02
SDO1YLR022C YKL063CP35725 167 aa2.43□□□□□ -2.02
SDO1YLR022C YBR137WP38276 179 aa2.43□□□□□ -2.02
SDO1YLR022C BIG1P38813 335 aa2.43□□□□□ -2.02
SDO1YLR022C SBE22P38814 852 aa2.43□□□□□ -2.02
SDO1YLR022C COX14P39103 70 aa2.43□□□□□ -2.02
SDO1YLR022C FLX1P40464 311 aa2.43□□□□□ -2.02
SDO1YLR022C SIM1P40472 476 aa2.43□□□□□ -2.02
SDO1YLR022C DFG10P40526 253 aa2.43□□□□□ -2.02
SDO1YLR022C HIT1P46973 164 aa2.43□□□□□ -2.02
SDO1YLR022C TAD2P47058 250 aa2.43□□□□□ -2.02
SDO1YLR022C TOS2P50078 622 aa2.43□□□□□ -2.02
SDO1YLR022C REX2P54964 269 aaKnown RBP2.43□□□□□ -2.02
SDO1YLR022C RPL22BP56628 122 aaKnown RBP2.43□□□□□ -2.02
SDO1YLR022C ACT1P60010 375 aaKnown RBP2.43□□□□□ -2.02
SDO1YLR022C ASR1Q06834 288 aa2.43□□□□□ -2.02
SDO1YLR022C YOR029WQ12243 111 aa2.43□□□□□ -2.02
SDO1YLR022C SAL1D6W196 494 aa2.42□□□□□ -2.02
SDO1YLR022C TRP1P00912 224 aa2.42□□□□□ -2.02
SDO1YLR022C PIS1P06197 220 aaKnown RBP2.42□□□□□ -2.02
SDO1YLR022C ARG80P07249 177 aa2.42□□□□□ -2.02
SDO1YLR022C BUB2P26448 306 aaPredicted RBP2.42□□□□□ -2.02
SDO1YLR022C SDH4P37298 181 aa2.42□□□□□ -2.02
SDO1YLR022C GPX2P38143 162 aa2.42□□□□□ -2.02
SDO1YLR022C YBR096WP38256 230 aa2.42□□□□□ -2.02
SDO1YLR022C THO1P40040 218 aaKnown RBP2.42□□□□□ -2.02
SDO1YLR022C PEP8P40335 379 aa2.42□□□□□ -2.02
SDO1YLR022C MAM33P40513 266 aa2.42□□□□□ -2.02
SDO1YLR022C YIA6P40556 373 aa2.42□□□□□ -2.02
SDO1YLR022C GAT4P40569 121 aa2.42□□□□□ -2.02
SDO1YLR022C YNL320WP42840 284 aa2.42□□□□□ -2.02
SDO1YLR022C CCC1P47818 322 aa2.42□□□□□ -2.02
SDO1YLR022C BRR6P53062 197 aa2.42□□□□□ -2.02
SDO1YLR022C CPD1P53314 239 aa2.42□□□□□ -2.02
SDO1YLR022C CWC25P53854 179 aaKnown RBP2.42□□□□□ -2.02
SDO1YLR022C YPL080CQ02826 108 aa2.42□□□□□ -2.02
SDO1YLR022C SPG4Q04438 115 aa2.42□□□□□ -2.02
SDO1YLR022C YDR124WQ04608 324 aa2.42□□□□□ -2.02
SDO1YLR022C COQ10Q08058 207 aa2.42□□□□□ -2.02
SDO1YLR022C APC9Q12107 265 aa2.42□□□□□ -2.02
SDO1YLR022C MCT1Q12283 360 aa2.42□□□□□ -2.02
SDO1YLR022C PCL9Q12477 304 aa2.42□□□□□ -2.02
SDO1YLR022C STE18P18852 110 aa2.41□□□□□ -2.02
SDO1YLR022C RPL16AP26784 199 aaKnown RBP2.41□□□□□ -2.02
SDO1YLR022C PTC1P35182 281 aa2.41□□□□□ -2.02
SDO1YLR022C PHO89P38361 574 aa2.41□□□□□ -2.02
SDO1YLR022C DDI1P40087 428 aa2.41□□□□□ -2.02
SDO1YLR022C SLM1P40485 686 aa2.41□□□□□ -2.02
SDO1YLR022C YDR391CQ04170 232 aa2.41□□□□□ -2.02
SDO1YLR022C UTP15Q04305 513 aaKnown RBP2.41□□□□□ -2.02
SDO1YLR022C SPO77Q06134 477 aa2.41□□□□□ -2.02
SDO1YLR022C DTD1Q07648 150 aaKnown RBP2.41□□□□□ -2.02
SDO1YLR022C SNX3Q08826 162 aaKnown RBP2.41□□□□□ -2.02
SDO1YLR022C MSH5Q12175 901 aa2.41□□□□□ -2.02
SDO1YLR022C UTP23Q12339 254 aaKnown RBP2.41□□□□□ -2.02
SDO1YLR022C SGA1P08019 549 aa2.4□□□□□ -2.03
SDO1YLR022C RPL27AP0C2H6 136 aaKnown RBP2.4□□□□□ -2.03
SDO1YLR022C RPL27BP0C2H7 136 aaKnown RBP2.4□□□□□ -2.03
SDO1YLR022C YJL197C-AP0C5P0 93 aa2.4□□□□□ -2.03
SDO1YLR022C MATALPHA1P0CY06 175 aa2.4□□□□□ -2.03
SDO1YLR022C HMLALPHA1P0CY07 175 aa2.4□□□□□ -2.03
SDO1YLR022C YPK2P18961 677 aa2.4□□□□□ -2.03
SDO1YLR022C TOM40P23644 387 aaKnown RBP2.4□□□□□ -2.03
SDO1YLR022C RNA15P25299 296 aaPredicted RBP2.4□□□□□ -2.03
SDO1YLR022C RPL16BP26785 198 aaKnown RBP2.4□□□□□ -2.03
SDO1YLR022C VMA6P32366 345 aaKnown RBP2.4□□□□□ -2.03
SDO1YLR022C YER184CP39961 794 aa2.4□□□□□ -2.03
SDO1YLR022C YCH1P42937 148 aa2.4□□□□□ -2.03
SDO1YLR022C MRM2P53123 320 aa2.4□□□□□ -2.03
SDO1YLR022C GET1P53192 235 aa2.4□□□□□ -2.03
SDO1YLR022C CUS2P53830 285 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 105.3 ms