RNA–Protein interactions for RNA: YKL135C

APL2, Transcript of Beta-adaptin subunit of the clathrin-associated protein (AP-1) complex, yeast

Gene APL2, Length 2,181 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL2	YKL135C	CSI2	Q08054	341 aa		0.97	□□□□□ -2.25
APL2	YKL135C	SEY1	Q99287	776 aa		0.97	□□□□□ -2.25
APL2	YKL135C	TDH2	P00358	332 aa	Known RBP	0.97	□□□□□ -2.25
APL2	YKL135C	CDC33	P07260	213 aa	Known RBP	0.97	□□□□□ -2.25
APL2	YKL135C	YHR214C-D	P0CX93	97 aa		0.97	□□□□□ -2.25
APL2	YKL135C	DBP3	P20447	523 aa	Known RBP	0.97	□□□□□ -2.25
APL2	YKL135C	POF1	P25576	258 aa		0.97	□□□□□ -2.25
APL2	YKL135C	RPS5	P26783	225 aa	Known RBP	0.97	□□□□□ -2.25
APL2	YKL135C	HSM3	P38348	480 aa		0.97	□□□□□ -2.25
APL2	YKL135C	RPL10	P41805	221 aa	Known RBP	0.97	□□□□□ -2.25
APL2	YKL135C	PIR5	P46999	287 aa		0.97	□□□□□ -2.25
APL2	YKL135C	NIF3	P53081	288 aa		0.97	□□□□□ -2.25
APL2	YKL135C	SED1	Q01589	338 aa		0.97	□□□□□ -2.25
APL2	YKL135C	SDC1	Q03323	175 aa		0.97	□□□□□ -2.25
APL2	YKL135C	YMR166C	Q03829	368 aa		0.97	□□□□□ -2.25
APL2	YKL135C	VBA1	Q04301	562 aa		0.97	□□□□□ -2.25
APL2	YKL135C	PEX10	Q05568	337 aa		0.97	□□□□□ -2.25
APL2	YKL135C	ISD11	Q6Q560	94 aa		0.97	□□□□□ -2.25
APL2	YKL135C	HIS3	P06633	220 aa		0.96	□□□□□ -2.26
APL2	YKL135C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.96	□□□□□ -2.26	not detected
APL2	YKL135C	ALB1	P47019	175 aa	Predicted RBP	0.96	□□□□□ -2.26
APL2	YKL135C	TAD2	P47058	250 aa		0.96	□□□□□ -2.26
APL2	YKL135C	YNL095C	P53932	642 aa		0.96	□□□□□ -2.26
APL2	YKL135C	ERV25	P54837	211 aa	Known RBP	0.96	□□□□□ -2.26
APL2	YKL135C	BOP2	Q06150	570 aa		0.96	□□□□□ -2.26
APL2	YKL135C	SLD7	Q08457	257 aa		0.96	□□□□□ -2.26
APL2	YKL135C	YAL064W-B	O13512	126 aa		0.96	□□□□□ -2.26
APL2	YKL135C	RAD10	P06838	210 aa		0.96	□□□□□ -2.26
APL2	YKL135C	YJL197C-A	P0C5P0	93 aa		0.96	□□□□□ -2.26
APL2	YKL135C	PEX3	P28795	441 aa		0.96	□□□□□ -2.26
APL2	YKL135C	FMP33	P46998	180 aa		0.96	□□□□□ -2.26
APL2	YKL135C	MPA43	P53583	542 aa	Predicted RBP	0.96	□□□□□ -2.26
APL2	YKL135C	YNL247W	P53852	767 aa	Known RBP	0.96	□□□□□ -2.26
APL2	YKL135C	GRH1	Q04410	372 aa	Known RBP	0.96	□□□□□ -2.26
APL2	YKL135C	DCR2	Q05924	578 aa		0.96	□□□□□ -2.26
APL2	YKL135C	GMC2	Q06201	188 aa		0.96	□□□□□ -2.26
APL2	YKL135C	RRP40	Q08285	240 aa	Known RBP	0.96	□□□□□ -2.26
APL2	YKL135C	PST1	Q12355	444 aa		0.96	□□□□□ -2.26
APL2	YKL135C	MRP1	P10662	321 aa	Known RBP	0.95	□□□□□ -2.26
APL2	YKL135C	SNF6	P18888	332 aa		0.95	□□□□□ -2.26
APL2	YKL135C	MEI4	P29467	408 aa		0.95	□□□□□ -2.26
APL2	YKL135C	CLG1	P35190	452 aa		0.95	□□□□□ -2.26
APL2	YKL135C	RRF1	P38771	230 aa		0.95	□□□□□ -2.26
APL2	YKL135C	YJR149W	P47177	404 aa		0.95	□□□□□ -2.26
APL2	YKL135C	SLX9	P53251	210 aa	Predicted RBP	0.95	□□□□□ -2.26
APL2	YKL135C	YLR460C	P54007	376 aa		0.95	□□□□□ -2.26
APL2	YKL135C	YPR147C	Q06522	304 aa	Known RBP	0.95	□□□□□ -2.26
APL2	YKL135C	ARV1	Q06541	321 aa		0.95	□□□□□ -2.26
APL2	YKL135C	ZWF1	P11412	505 aa	Known RBP	0.94	□□□□□ -2.26
APL2	YKL135C	DPB2	P24482	689 aa	Predicted RBP	0.94	□□□□□ -2.26
APL2	YKL135C	HSP150	P32478	413 aa		0.94	□□□□□ -2.26
APL2	YKL135C	MAK5	P38112	773 aa	Predicted RBP	0.94	□□□□□ -2.26
APL2	YKL135C	NPT1	P39683	429 aa	Known RBP	0.94	□□□□□ -2.26
APL2	YKL135C	COA1	P40452	197 aa		0.94	□□□□□ -2.26
APL2	YKL135C	GLR1	P41921	483 aa	Known RBP	0.94	□□□□□ -2.26
APL2	YKL135C	YJL118W	P47022	219 aa		0.94	□□□□□ -2.26
APL2	YKL135C	YJR012C	P47087	207 aa		0.94	□□□□□ -2.26
APL2	YKL135C	ADO1	P47143	340 aa	Known RBP	0.94	□□□□□ -2.26
APL2	YKL135C	LSM3	P57743	89 aa	Known RBP	0.94	□□□□□ -2.26
APL2	YKL135C	OST6	Q03723	332 aa		0.94	□□□□□ -2.26
APL2	YKL135C	FMN1	Q03778	218 aa		0.94	□□□□□ -2.26
APL2	YKL135C	YPR011C	Q12251	326 aa		0.94	□□□□□ -2.26
APL2	YKL135C	YBL112C	Q3E7Y4	105 aa		0.94	□□□□□ -2.26
APL2	YKL135C	RPL24A	P04449	155 aa	Known RBP	0.94	□□□□□ -2.26
APL2	YKL135C	APA2	P22108	325 aa		0.94	□□□□□ -2.26
APL2	YKL135C	MDH2	P22133	377 aa		0.94	□□□□□ -2.26
APL2	YKL135C	CUE1	P38428	203 aa		0.94	□□□□□ -2.26
APL2	YKL135C	RTT105	P40063	208 aa		0.94	□□□□□ -2.26
APL2	YKL135C	YER121W	P40076	114 aa		0.94	□□□□□ -2.26
APL2	YKL135C	APQ12	P40532	138 aa		0.94	□□□□□ -2.26
APL2	YKL135C	GON7	P46984	123 aa		0.94	□□□□□ -2.26
APL2	YKL135C	YJL028W	P47062	111 aa		0.94	□□□□□ -2.26
APL2	YKL135C	APS3	P47064	194 aa		0.94	□□□□□ -2.26
APL2	YKL135C	OST3	P48439	350 aa		0.94	□□□□□ -2.26
APL2	YKL135C	PET117	Q02771	107 aa		0.94	□□□□□ -2.26
APL2	YKL135C	SPO77	Q06134	477 aa		0.94	□□□□□ -2.26
APL2	YKL135C	YDL180W	Q12301	547 aa		0.94	□□□□□ -2.26
APL2	YKL135C	RNP1	P32385	249 aa		0.93	□□□□□ -2.26
APL2	YKL135C	YHL049C	P38722	271 aa		0.93	□□□□□ -2.26
APL2	YKL135C	AST2	P39945	430 aa	Known RBP	0.93	□□□□□ -2.26
APL2	YKL135C	MEP1	P40260	492 aa		0.93	□□□□□ -2.26
APL2	YKL135C	GAT4	P40569	121 aa		0.93	□□□□□ -2.26
APL2	YKL135C	MDM34	P53083	459 aa		0.93	□□□□□ -2.26
APL2	YKL135C	MPP6	P53725	186 aa	Predicted RBP	0.93	□□□□□ -2.26
APL2	YKL135C	YNL046W	P53956	172 aa		0.93	□□□□□ -2.26
APL2	YKL135C	YDR249C	Q03787	373 aa		0.93	□□□□□ -2.26
APL2	YKL135C	FCF1	Q05498	189 aa	Predicted RBP	0.93	□□□□□ -2.26
APL2	YKL135C	LOA1	Q06508	300 aa		0.93	□□□□□ -2.26
APL2	YKL135C	GRE1	Q08969	168 aa		0.93	□□□□□ -2.26
APL2	YKL135C	BTS1	Q12051	335 aa		0.93	□□□□□ -2.26
APL2	YKL135C	YPL119C-A	Q3E751	87 aa		0.93	□□□□□ -2.26
APL2	YKL135C	RAD51	P25454	400 aa		0.93	□□□□□ -2.26
APL2	YKL135C	RFC4	P40339	323 aa	Known RBP	0.93	□□□□□ -2.26
APL2	YKL135C	GPI8	P49018	411 aa		0.93	□□□□□ -2.26
APL2	YKL135C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.93	□□□□□ -2.26	not detected
APL2	YKL135C	ATC1	Q04005	294 aa		0.93	□□□□□ -2.26
APL2	YKL135C	YCL048W-A	Q2V2Q2	79 aa		0.93	□□□□□ -2.26
APL2	YKL135C	SEC14	P24280	304 aa	Known RBP	0.92	□□□□□ -2.26
APL2	YKL135C	YCR099C	P25657	155 aa		0.92	□□□□□ -2.26
APL2	YKL135C	FES1	P38260	290 aa		0.92	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms