RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A IRC22P40006 225 aa2.09□□□□□ -2.07
SFT1YKL006C-A ABF2Q02486 183 aa2.09□□□□□ -2.07
SFT1YKL006C-A YML108WQ03759 105 aa2.09□□□□□ -2.07
SFT1YKL006C-A YLR050CQ12155 161 aaKnown RBP2.09□□□□□ -2.07
SFT1YKL006C-A BBP1Q12365 385 aa2.09□□□□□ -2.07
SFT1YKL006C-A GEP5Q12393 293 aa2.09□□□□□ -2.07
SFT1YKL006C-A YOR020W-AQ3E824 90 aa2.09□□□□□ -2.07
SFT1YKL006C-A YIL177CP40434 1758 aa2.08□□□□□ -2.08
SFT1YKL006C-A YJL225CP40889 1758 aa2.08□□□□□ -2.08
SFT1YKL006C-A SIR2P06700 562 aa2.08□□□□□ -2.08
SFT1YKL006C-A DPM1P14020 267 aaKnown RBP2.08□□□□□ -2.08
SFT1YKL006C-A TRX3P25372 127 aa2.08□□□□□ -2.08
SFT1YKL006C-A YCR090CP25654 182 aaKnown RBP2.08□□□□□ -2.08
SFT1YKL006C-A MGT1P26188 188 aa2.08□□□□□ -2.08
SFT1YKL006C-A RMD6P39975 231 aa2.08□□□□□ -2.08
SFT1YKL006C-A SPO73P40031 143 aa2.08□□□□□ -2.08
SFT1YKL006C-A HMF1P40037 129 aaKnown RBP2.08□□□□□ -2.08
SFT1YKL006C-A RSM27P53305 110 aa2.08□□□□□ -2.08
SFT1YKL006C-A ALG9P53868 555 aaKnown RBP2.08□□□□□ -2.08
SFT1YKL006C-A COG5P53951 403 aa2.08□□□□□ -2.08
SFT1YKL006C-A YNL010WP53981 241 aaKnown RBP2.08□□□□□ -2.08
SFT1YKL006C-A NUP49Q02199 472 aa2.08□□□□□ -2.08
SFT1YKL006C-A RSM10Q03201 203 aa2.08□□□□□ -2.08
SFT1YKL006C-A LPP1Q04396 274 aa2.08□□□□□ -2.08
SFT1YKL006C-A FCF1Q05498 189 aaPredicted RBP2.08□□□□□ -2.08
SFT1YKL006C-A YPL257WQ08974 193 aa2.08□□□□□ -2.08
SFT1YKL006C-A YPR170W-BP0C5R9 85 aa2.07□□□□□ -2.08
SFT1YKL006C-A SNF4P12904 322 aa2.07□□□□□ -2.08
SFT1YKL006C-A FCY2P17064 533 aa2.07□□□□□ -2.08
SFT1YKL006C-A RCN1P36054 211 aa2.07□□□□□ -2.08
SFT1YKL006C-A UTP30P36144 274 aaKnown RBP2.07□□□□□ -2.08
SFT1YKL006C-A DER1P38307 211 aa2.07□□□□□ -2.08
SFT1YKL006C-A NVJ1P38881 321 aa2.07□□□□□ -2.08
SFT1YKL006C-A YAR068WP39564 161 aa2.07□□□□□ -2.08
SFT1YKL006C-A YJL144WP47009 104 aa2.07□□□□□ -2.08
SFT1YKL006C-A GAS3Q03655 524 aa2.07□□□□□ -2.08
SFT1YKL006C-A YMD8Q03697 442 aa2.07□□□□□ -2.08
SFT1YKL006C-A RRP17Q04031 235 aaPredicted RBP2.07□□□□□ -2.08
SFT1YKL006C-A PEX12Q04370 399 aa2.07□□□□□ -2.08
SFT1YKL006C-A HRT1Q08273 121 aa2.07□□□□□ -2.08
SFT1YKL006C-A YPL162CQ12042 273 aa2.07□□□□□ -2.08
SFT1YKL006C-A NSL1Q12143 216 aa2.07□□□□□ -2.08
SFT1YKL006C-A YDL085C-AQ3E7B7 68 aaKnown RBP2.07□□□□□ -2.08
SFT1YKL006C-A TDA8Q6B2U8 126 aa2.07□□□□□ -2.08
SFT1YKL006C-A PET20Q99373 253 aa2.07□□□□□ -2.08
SFT1YKL006C-A RAD10P06838 210 aa2.06□□□□□ -2.08
SFT1YKL006C-A CNB1P25296 175 aa2.06□□□□□ -2.08
SFT1YKL006C-A SEC17P32602 292 aa2.06□□□□□ -2.08
SFT1YKL006C-A YBR063CP38083 404 aa2.06□□□□□ -2.08
SFT1YKL006C-A FMP23P38231 175 aa2.06□□□□□ -2.08
SFT1YKL006C-A LSM4P40070 187 aaKnown RBP2.06□□□□□ -2.08
SFT1YKL006C-A YFH7P43591 353 aa2.06□□□□□ -2.08
SFT1YKL006C-A YFR045WP43617 309 aa2.06□□□□□ -2.08
SFT1YKL006C-A YGL235WP53071 178 aa2.06□□□□□ -2.08
SFT1YKL006C-A YDC1Q02896 317 aa2.06□□□□□ -2.08
SFT1YKL006C-A IES3Q12345 250 aa2.06□□□□□ -2.08
SFT1YKL006C-A MBF1O14467 151 aaKnown RBP2.05□□□□□ -2.08
SFT1YKL006C-A ATG22P25568 528 aa2.05□□□□□ -2.08
SFT1YKL006C-A POP4P38336 279 aa2.05□□□□□ -2.08
SFT1YKL006C-A COS8P38723 381 aa2.05□□□□□ -2.08
SFT1YKL006C-A AST2P39945 430 aaKnown RBP2.05□□□□□ -2.08
SFT1YKL006C-A EDC3P39998 551 aaKnown RBP2.05□□□□□ -2.08
SFT1YKL006C-A GLE2P40066 365 aa2.05□□□□□ -2.08
SFT1YKL006C-A ICE2P40499 491 aa2.05□□□□□ -2.08
SFT1YKL006C-A FIS1P40515 155 aa2.05□□□□□ -2.08
SFT1YKL006C-A LSM1P47017 172 aaKnown RBP2.05□□□□□ -2.08
SFT1YKL006C-A MIG2P53035 382 aa2.05□□□□□ -2.08
SFT1YKL006C-A YLR053CQ12026 108 aa2.05□□□□□ -2.08
SFT1YKL006C-A PEX11Q12462 236 aa2.05□□□□□ -2.08
SFT1YKL006C-A RPS23AP0CX29 145 aaKnown RBP2.04□□□□□ -2.08
SFT1YKL006C-A RPS23BP0CX30 145 aa2.04□□□□□ -2.08
SFT1YKL006C-A PET9P18239 318 aaKnown RBP2.04□□□□□ -2.08
SFT1YKL006C-A SCO1P23833 295 aa2.04□□□□□ -2.08
SFT1YKL006C-A AHC2P25649 128 aa2.04□□□□□ -2.08
SFT1YKL006C-A YHR125WP38831 101 aa2.04□□□□□ -2.08
SFT1YKL006C-A RSM25P40496 264 aa2.04□□□□□ -2.08
SFT1YKL006C-A FMP32P43557 207 aa2.04□□□□□ -2.08
SFT1YKL006C-A ECO1P43605 281 aa2.04□□□□□ -2.08
SFT1YKL006C-A ARP3P47117 449 aaKnown RBP2.04□□□□□ -2.08
SFT1YKL006C-A ARO8P53090 500 aaKnown RBP2.04□□□□□ -2.08
SFT1YKL006C-A HSK3P69852 69 aa2.04□□□□□ -2.08
SFT1YKL006C-A SWP1Q02795 286 aa2.04□□□□□ -2.08
SFT1YKL006C-A AIM34Q03673 198 aa2.04□□□□□ -2.08
SFT1YKL006C-A YDR249CQ03787 373 aa2.04□□□□□ -2.08
SFT1YKL006C-A HPT1Q04178 221 aaKnown RBP2.04□□□□□ -2.08
SFT1YKL006C-A TRM12Q04235 462 aa2.04□□□□□ -2.08
SFT1YKL006C-A DYN3Q04949 312 aa2.04□□□□□ -2.08
SFT1YKL006C-A YPR127WQ06494 345 aa2.04□□□□□ -2.08
SFT1YKL006C-A MCP1Q12106 302 aa2.04□□□□□ -2.08
SFT1YKL006C-A RDI1Q12434 202 aa2.04□□□□□ -2.08
SFT1YKL006C-A YFR032C-BQ8TGU2 87 aa2.04□□□□□ -2.08
SFT1YKL006C-A REP2P03872 296 aa2.03□□□□□ -2.08
SFT1YKL006C-A CMD1P06787 147 aaKnown RBP2.03□□□□□ -2.08
SFT1YKL006C-A YLR156WP0CE96 114 aa2.03□□□□□ -2.08
SFT1YKL006C-A YLR159WP0CE97 114 aa2.03□□□□□ -2.08
SFT1YKL006C-A YLR161WP0CE98 114 aa2.03□□□□□ -2.08
SFT1YKL006C-A RPS24AP0CX31 135 aaKnown RBP2.03□□□□□ -2.08
SFT1YKL006C-A RPS24BP0CX32 135 aaKnown RBP2.03□□□□□ -2.08
SFT1YKL006C-A YCR023CP25351 611 aa2.03□□□□□ -2.08
SFT1YKL006C-A TKL2P33315 681 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms