RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	CDD1	Q06549	142 aa		3.15	□□□□□ -1.91
SOD1	YJR104C	AAD4	Q07747	329 aa		3.15	□□□□□ -1.91
SOD1	YJR104C	YLR030W	Q07967	263 aa		3.15	□□□□□ -1.91
SOD1	YJR104C	FSF1	Q12029	327 aa	Known RBP	3.15	□□□□□ -1.91
SOD1	YJR104C	RDL1	Q12305	139 aa	Known RBP	3.15	□□□□□ -1.91
SOD1	YJR104C	PRR2	Q12310	699 aa		3.15	□□□□□ -1.91
SOD1	YJR104C	ISA2	Q12425	185 aa		3.15	□□□□□ -1.91
SOD1	YJR104C	PCL9	Q12477	304 aa		3.15	□□□□□ -1.91
SOD1	YJR104C	YIR021W-A	Q3E739	70 aa		3.15	□□□□□ -1.91
SOD1	YJR104C	YKL033W-A	Q86ZR7	236 aa		3.15	□□□□□ -1.91
SOD1	YJR104C	TDH2	P00358	332 aa	Known RBP	3.14	□□□□□ -1.91
SOD1	YJR104C	MES1	P00958	751 aa	Known RBP	3.14	□□□□□ -1.91
SOD1	YJR104C	CDC36	P06100	191 aa	Predicted RBP	3.14	□□□□□ -1.91
SOD1	YJR104C	RBK1	P25332	333 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	ATS1	P31386	333 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	ERG3	P32353	365 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	FMT1	P32785	401 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	ALK2	P32789	676 aa	Predicted RBP	3.14	□□□□□ -1.91
SOD1	YJR104C	YKL187C	P34231	750 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	MIX23	P38162	196 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	LSM2	P38203	95 aa	Known RBP	3.14	□□□□□ -1.91
SOD1	YJR104C	ZTA1	P38230	334 aa	Known RBP	3.14	□□□□□ -1.91
SOD1	YJR104C	URA8	P38627	578 aa	Predicted RBP	3.14	□□□□□ -1.91
SOD1	YJR104C	TRR2	P38816	342 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	WSS1	P38838	269 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	ELO1	P39540	310 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	PUG1	P40100	303 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	SMK1	P41808	388 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	MEP2	P41948	499 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	YJR096W	P47137	282 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	BNS1	P50084	137 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	YGR066C	P53242	292 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	PAU12	P53343	120 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	BOR1	P53838	576 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	YNL184C	P53876	108 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	GOT1	Q03554	138 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	ROT1	Q03691	256 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	MTQ2	Q03920	221 aa	Predicted RBP	3.14	□□□□□ -1.91
SOD1	YJR104C	GTO3	Q04806	366 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	ROY1	Q04847	553 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	ATG33	Q06485	197 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	BSC6	Q08280	497 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	YOR385W	Q08909	290 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	TGL5	Q12043	749 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	TGS1	Q12052	315 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	SWM1	Q12379	170 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	PAR32	Q12515	295 aa	Known RBP	3.14	□□□□□ -1.91
SOD1	YJR104C	YBR182C-A	Q8TGU6	64 aa		3.14	□□□□□ -1.91
SOD1	YJR104C	SLH1	P53327	1967 aa	Known RBP	3.14	□□□□□ -1.91
SOD1	YJR104C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
SOD1	YJR104C	TPI1	P00942	248 aa	Known RBP	3.13	□□□□□ -1.91
SOD1	YJR104C	QCR2	P07257	368 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	RPL35A	P0CX84	120 aa	Known RBP	3.13	□□□□□ -1.91
SOD1	YJR104C	RPL35B	P0CX85	120 aa	Known RBP	3.13	□□□□□ -1.91
SOD1	YJR104C	YCR007C	P25354	239 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	MRP49	P32388	137 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	GLC7	P32598	312 aa	Known RBP	3.13	□□□□□ -1.91
SOD1	YJR104C	PAU2	P32612	120 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	MNS1	P32906	549 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	DOG1	P38774	246 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	YHR210C	P38893	341 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	TIM17	P39515	158 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	SEC72	P39742	193 aa	Known RBP	3.13	□□□□□ -1.91
SOD1	YJR104C	PHS1	P40857	217 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	POP1	P41812	875 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	TES1	P41903	349 aa	Known RBP	3.13	□□□□□ -1.91
SOD1	YJR104C	RPA43	P46669	326 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	GPI14	P47088	403 aa	Known RBP	3.13	□□□□□ -1.91
SOD1	YJR104C	UBC9	P50623	157 aa	Predicted RBP	3.13	□□□□□ -1.91
SOD1	YJR104C	RIB4	P50861	169 aa	Predicted RBP	3.13	□□□□□ -1.91
SOD1	YJR104C	YNL260C	P53846	198 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	HHT1	P61830	136 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	HNT1	Q04344	158 aa	Known RBP	3.13	□□□□□ -1.91
SOD1	YJR104C	ELP6	Q04868	273 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	MRX8	Q05473	314 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	LOA1	Q06508	300 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	SHS1	Q07657	551 aa		3.13	□□□□□ -1.91
SOD1	YJR104C	FOL3	Q12676	427 aa	Predicted RBP	3.13	□□□□□ -1.91
SOD1	YJR104C	SEC4	P07560	215 aa	Known RBP	3.12	□□□□□ -1.91
SOD1	YJR104C	ATP10	P18496	279 aa		3.12	□□□□□ -1.91
SOD1	YJR104C	OCH1	P31755	480 aa		3.12	□□□□□ -1.91
SOD1	YJR104C	DSS4	P32601	143 aa		3.12	□□□□□ -1.91
SOD1	YJR104C	EMP70	P32802	667 aa		3.12	□□□□□ -1.91
SOD1	YJR104C	PRP18	P33411	251 aa	Predicted RBP	3.12	□□□□□ -1.91
SOD1	YJR104C	YKL102C	P34249	101 aa		3.12	□□□□□ -1.91
SOD1	YJR104C	PAN3	P36102	679 aa	Predicted RBP	3.12	□□□□□ -1.91
SOD1	YJR104C	AGP2	P38090	596 aa		3.12	□□□□□ -1.91
SOD1	YJR104C	PTH1	P38876	190 aa	Known RBP	3.12	□□□□□ -1.91
SOD1	YJR104C	HSP10	P38910	106 aa		3.12	□□□□□ -1.91
SOD1	YJR104C	YEL028W	P39989	153 aa		3.12	□□□□□ -1.91
SOD1	YJR104C	COX15	P40086	486 aa		3.12	□□□□□ -1.91
SOD1	YJR104C	RPL13B	P40212	199 aa	Known RBP	3.12	□□□□□ -1.91
SOD1	YJR104C	DLS1	P40366	167 aa		3.12	□□□□□ -1.91
SOD1	YJR104C	GPP1	P41277	250 aa	Known RBP	3.12	□□□□□ -1.91
SOD1	YJR104C	GZF3	P42944	551 aa	Known RBP	3.12	□□□□□ -1.91
SOD1	YJR104C	PAM16	P42949	149 aa		3.12	□□□□□ -1.91
SOD1	YJR104C	SMD3	P43321	101 aa	Known RBP	3.12	□□□□□ -1.91
SOD1	YJR104C	MUP1	P50276	574 aa		3.12	□□□□□ -1.91
SOD1	YJR104C	NIF3	P53081	288 aa		3.12	□□□□□ -1.91
SOD1	YJR104C	RMD9	P53140	646 aa	Known RBP	3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 101.7 ms