RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W YGL159WP53110 370 aa3.89□□□□□ -1.79
NMD3YHR170W SCW4P53334 386 aaKnown RBP3.89□□□□□ -1.79
NMD3YHR170W STD1Q02794 444 aa3.89□□□□□ -1.79
NMD3YHR170W YOL024WQ08172 172 aa3.89□□□□□ -1.79
NMD3YHR170W NCE102Q12207 173 aaRIP-Chip data3.89□□□□□ -1.79not detected
NMD3YHR170W RRI1Q12468 440 aa3.89□□□□□ -1.79
NMD3YHR170W TDH2P00358 332 aaKnown RBP3.89□□□□□ -1.79
NMD3YHR170W DSF1P0CX08 502 aa3.89□□□□□ -1.79
NMD3YHR170W YNR073CP0CX09 502 aa3.89□□□□□ -1.79
NMD3YHR170W FUS3P16892 353 aaKnown RBP3.89□□□□□ -1.79
NMD3YHR170W VAM7P32912 316 aa3.89□□□□□ -1.79
NMD3YHR170W MRPL39P36533 70 aa3.89□□□□□ -1.79
NMD3YHR170W AVT7P40501 490 aa3.89□□□□□ -1.79
NMD3YHR170W ATG27P46989 271 aa3.89□□□□□ -1.79
NMD3YHR170W NRK1P53915 240 aa3.89□□□□□ -1.79
NMD3YHR170W POS5Q06892 414 aa3.89□□□□□ -1.79
NMD3YHR170W RDI1Q12434 202 aa3.89□□□□□ -1.79
NMD3YHR170W FOL3Q12676 427 aaPredicted RBP3.89□□□□□ -1.79
NMD3YHR170W PRP8P33334 2413 aaKnown RBP3.88□□□□□ -1.79
NMD3YHR170W REP2P03872 296 aa3.88□□□□□ -1.79
NMD3YHR170W VMA5P31412 392 aaKnown RBP3.88□□□□□ -1.79
NMD3YHR170W FIG1P38224 298 aa3.88□□□□□ -1.79
NMD3YHR170W GPI16P38875 610 aa3.88□□□□□ -1.79
NMD3YHR170W YND1P40009 630 aa3.88□□□□□ -1.79
NMD3YHR170W SMB1P40018 196 aaKnown RBP3.88□□□□□ -1.79
NMD3YHR170W YER085CP40058 173 aa3.88□□□□□ -1.79
NMD3YHR170W SYS1P41544 203 aa3.88□□□□□ -1.79
NMD3YHR170W OKP1P53298 406 aa3.88□□□□□ -1.79
NMD3YHR170W SUR7P54003 302 aa3.88□□□□□ -1.79
NMD3YHR170W RSM23Q01163 450 aa3.88□□□□□ -1.79
NMD3YHR170W MRPS16Q02608 121 aa3.88□□□□□ -1.79
NMD3YHR170W DIG2Q03373 323 aaKnown RBP3.88□□□□□ -1.79
NMD3YHR170W YDR387CQ04162 555 aa3.88□□□□□ -1.79
NMD3YHR170W VBA1Q04301 562 aa3.88□□□□□ -1.79
NMD3YHR170W COA4Q05809 96 aa3.88□□□□□ -1.79
NMD3YHR170W RRG8Q06109 277 aa3.88□□□□□ -1.79
NMD3YHR170W RAF1Q06891 181 aa3.88□□□□□ -1.79
NMD3YHR170W YDL218WQ07629 317 aa3.88□□□□□ -1.79
NMD3YHR170W RNH203Q12338 110 aa3.88□□□□□ -1.79
NMD3YHR170W IZH2Q12442 317 aa3.88□□□□□ -1.79
NMD3YHR170W FMP16Q12497 93 aa3.88□□□□□ -1.79
NMD3YHR170W YLL053CP0CD98 152 aa3.87□□□□□ -1.79
NMD3YHR170W NAM2P11325 894 aa3.87□□□□□ -1.79
NMD3YHR170W URA6P15700 204 aa3.87□□□□□ -1.79
NMD3YHR170W CDC23P16522 626 aa3.87□□□□□ -1.79
NMD3YHR170W YPS1P32329 569 aa3.87□□□□□ -1.79
NMD3YHR170W YKL063CP35725 167 aa3.87□□□□□ -1.79
NMD3YHR170W MRPL3P36516 390 aa3.87□□□□□ -1.79
NMD3YHR170W YER084WP40057 128 aa3.87□□□□□ -1.79
NMD3YHR170W FLX1P40464 311 aa3.87□□□□□ -1.79
NMD3YHR170W IDP2P41939 412 aa3.87□□□□□ -1.79
NMD3YHR170W AVT4P50944 713 aa3.87□□□□□ -1.79
NMD3YHR170W RSM27P53305 110 aa3.87□□□□□ -1.79
NMD3YHR170W YNR048WP53740 393 aa3.87□□□□□ -1.79
NMD3YHR170W YPL077CQ02831 240 aa3.87□□□□□ -1.79
NMD3YHR170W RCE1Q03530 315 aa3.87□□□□□ -1.79
NMD3YHR170W GEP3Q08622 556 aa3.87□□□□□ -1.79
NMD3YHR170W SRL2Q12020 392 aa3.87□□□□□ -1.79
NMD3YHR170W HUT1Q12520 339 aa3.87□□□□□ -1.79
NMD3YHR170W TDH3P00359 332 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
NMD3YHR170W HEM4P06174 275 aa3.86□□□□□ -1.79
NMD3YHR170W CHO1P08456 276 aa3.86□□□□□ -1.79
NMD3YHR170W NHP6BP11633 99 aaKnown RBP3.86□□□□□ -1.79
NMD3YHR170W RPL30P14120 105 aaKnown RBP3.86□□□□□ -1.79
NMD3YHR170W MAK32P23060 363 aa3.86□□□□□ -1.79
NMD3YHR170W DEG1P31115 442 aaKnown RBP3.86□□□□□ -1.79
NMD3YHR170W YMR262WP38430 313 aa3.86□□□□□ -1.79
NMD3YHR170W YER137CP40083 148 aaKnown RBP3.86□□□□□ -1.79
NMD3YHR170W MOB2P43563 287 aa3.86□□□□□ -1.79
NMD3YHR170W UFD1P53044 361 aa3.86□□□□□ -1.79
NMD3YHR170W HHT1P61830 136 aa3.86□□□□□ -1.79
NMD3YHR170W PLP1Q04004 230 aa3.86□□□□□ -1.79
NMD3YHR170W HNT1Q04344 158 aaKnown RBP3.86□□□□□ -1.79
NMD3YHR170W GTO3Q04806 366 aa3.86□□□□□ -1.79
NMD3YHR170W FIT3Q08907 204 aa3.86□□□□□ -1.79
NMD3YHR170W FEX2Q08991 375 aa3.86□□□□□ -1.79
NMD3YHR170W PAA1Q12447 191 aaKnown RBP3.86□□□□□ -1.79
NMD3YHR170W SPO24Q3E752 67 aa3.86□□□□□ -1.79
NMD3YHR170W PHO2P07269 559 aa3.85□□□□□ -1.79
NMD3YHR170W MSI1P13712 422 aa3.85□□□□□ -1.79
NMD3YHR170W YCR016WP25617 290 aaKnown RBP3.85□□□□□ -1.79
NMD3YHR170W FMT1P32785 401 aa3.85□□□□□ -1.79
NMD3YHR170W MCH2P36032 473 aa3.85□□□□□ -1.79
NMD3YHR170W HOT13P36078 116 aa3.85□□□□□ -1.79
NMD3YHR170W PAN3P36102 679 aaPredicted RBP3.85□□□□□ -1.79
NMD3YHR170W MRPL27P36526 146 aaPredicted RBP3.85□□□□□ -1.79
NMD3YHR170W QDR3P38227 689 aa3.85□□□□□ -1.79
NMD3YHR170W PET100P38958 111 aa3.85□□□□□ -1.79
NMD3YHR170W XBP1P40489 647 aa3.85□□□□□ -1.79
NMD3YHR170W OST1P41543 476 aaKnown RBP3.85□□□□□ -1.79
NMD3YHR170W YFL051CP43552 160 aa3.85□□□□□ -1.79
NMD3YHR170W YJL118WP47022 219 aa3.85□□□□□ -1.79
NMD3YHR170W NSA1P53136 463 aaPredicted RBP3.85□□□□□ -1.79
NMD3YHR170W MRPS17Q03246 237 aaPredicted RBP3.85□□□□□ -1.79
NMD3YHR170W YOR385WQ08909 290 aa3.85□□□□□ -1.79
NMD3YHR170W FEX1Q08913 375 aa3.85□□□□□ -1.79
NMD3YHR170W YBR298C-AQ8TGK4 73 aa3.85□□□□□ -1.79
NMD3YHR170W FSH3Q99369 266 aa3.85□□□□□ -1.79
NMD3YHR170W RPL18AP0CX49 186 aaKnown RBP3.85□□□□□ -1.79
NMD3YHR170W RPL18BP0CX50 186 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms