RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W VAM3Q12241 283 aa5.19□□□□□ -1.58
MSP1YGR028W RPL21BQ12672 160 aaKnown RBP5.19□□□□□ -1.58
MSP1YGR028W ATG40Q99325 256 aa5.19□□□□□ -1.58
MSP1YGR028W CDC31P06704 161 aaKnown RBP5.18□□□□□ -1.58
MSP1YGR028W GDH1P07262 454 aaKnown RBP5.18□□□□□ -1.58
MSP1YGR028W RPS18AP0CX55 146 aaKnown RBP5.18□□□□□ -1.58
MSP1YGR028W RPS18BP0CX56 146 aaPredicted RBP5.18□□□□□ -1.58
MSP1YGR028W PET18P25362 215 aa5.18□□□□□ -1.58
MSP1YGR028W TCA17P32613 152 aa5.18□□□□□ -1.58
MSP1YGR028W VAM7P32912 316 aa5.18□□□□□ -1.58
MSP1YGR028W MRPL36P36531 177 aa5.18□□□□□ -1.58
MSP1YGR028W PSD1P39006 500 aa5.18□□□□□ -1.58
MSP1YGR028W OKP1P53298 406 aa5.18□□□□□ -1.58
MSP1YGR028W ADH6Q04894 360 aaKnown RBP5.18□□□□□ -1.58
MSP1YGR028W UPS1Q05776 175 aa5.18□□□□□ -1.58
MSP1YGR028W ARR2Q06597 130 aa5.18□□□□□ -1.58
MSP1YGR028W FCY1Q12178 158 aa5.18□□□□□ -1.58
MSP1YGR028W YOR192C-CQ3E736 78 aa5.18□□□□□ -1.58
MSP1YGR028W RPL5P26321 297 aaKnown RBP5.17□□□□□ -1.58
MSP1YGR028W PEX4P29340 183 aa5.17□□□□□ -1.58
MSP1YGR028W PRS2P38620 318 aaKnown RBP5.17□□□□□ -1.58
MSP1YGR028W AGE2P40529 298 aa5.17□□□□□ -1.58
MSP1YGR028W GVP36P40531 326 aaKnown RBP5.17□□□□□ -1.58
MSP1YGR028W YAE1P47118 141 aaPredicted RBP5.17□□□□□ -1.58
MSP1YGR028W HSK3P69852 69 aa5.17□□□□□ -1.58
MSP1YGR028W RPL24BP24000 155 aaKnown RBP5.16□□□□□ -1.58
MSP1YGR028W ATG22P25568 528 aa5.16□□□□□ -1.58
MSP1YGR028W ERG3P32353 365 aa5.16□□□□□ -1.58
MSP1YGR028W YNK1P36010 153 aaKnown RBP5.16□□□□□ -1.58
MSP1YGR028W SHE2P36068 246 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
MSP1YGR028W SWD3P38123 315 aa5.16□□□□□ -1.58
MSP1YGR028W GNA1P43577 159 aaPredicted RBP5.16□□□□□ -1.58
MSP1YGR028W GPI14P47088 403 aaKnown RBP5.16□□□□□ -1.58
MSP1YGR028W TTI2P47168 421 aa5.16□□□□□ -1.58
MSP1YGR028W BXI1P48558 297 aa5.16□□□□□ -1.58
MSP1YGR028W CTF19Q02732 369 aa5.16□□□□□ -1.58
MSP1YGR028W YDR415CQ04033 374 aaPredicted RBP5.16□□□□□ -1.58
MSP1YGR028W ODC2Q99297 307 aa5.16□□□□□ -1.58
MSP1YGR028W HIS3P06633 220 aa5.15□□□□□ -1.59
MSP1YGR028W YER190C-BP0CX94 160 aa5.15□□□□□ -1.59
MSP1YGR028W YEL077W-AP0CX95 160 aa5.15□□□□□ -1.59
MSP1YGR028W YGR296C-BP0CX96 160 aa5.15□□□□□ -1.59
MSP1YGR028W YPL283W-BP0CX97 160 aa5.15□□□□□ -1.59
MSP1YGR028W YPR204C-AP0CX98 160 aa5.15□□□□□ -1.59
MSP1YGR028W YFL068WP0CX99 160 aa5.15□□□□□ -1.59
MSP1YGR028W YLL066W-AP0CY00 160 aa5.15□□□□□ -1.59
MSP1YGR028W YLL067W-AP0CY01 160 aa5.15□□□□□ -1.59
MSP1YGR028W VMA5P31412 392 aaKnown RBP5.15□□□□□ -1.59
MSP1YGR028W AGA2P32781 87 aa5.15□□□□□ -1.59
MSP1YGR028W SOR1P35497 357 aaKnown RBP5.15□□□□□ -1.59
MSP1YGR028W GOS1P38736 223 aa5.15□□□□□ -1.59
MSP1YGR028W YJL218WP40892 196 aaKnown RBP5.15□□□□□ -1.59
MSP1YGR028W YJR056CP47115 236 aa5.15□□□□□ -1.59
MSP1YGR028W FMP48P53233 369 aa5.15□□□□□ -1.59
MSP1YGR028W YNL234WP53857 426 aa5.15□□□□□ -1.59
MSP1YGR028W SRL4Q03085 281 aa5.15□□□□□ -1.59
MSP1YGR028W ECM18Q04623 453 aa5.15□□□□□ -1.59
MSP1YGR028W SOR2Q07786 357 aa5.15□□□□□ -1.59
MSP1YGR028W YOL118CQ08259 102 aa5.15□□□□□ -1.59
MSP1YGR028W CRC1Q12289 327 aa5.15□□□□□ -1.59
MSP1YGR028W ATO3Q12359 275 aa5.15□□□□□ -1.59
MSP1YGR028W BBP1Q12365 385 aa5.15□□□□□ -1.59
MSP1YGR028W YGR035W-AQ45U48 73 aa5.15□□□□□ -1.59
MSP1YGR028W RAD52P06778 471 aaKnown RBP5.14□□□□□ -1.59
MSP1YGR028W VMA6P32366 345 aaKnown RBP5.14□□□□□ -1.59
MSP1YGR028W SWD2P36104 329 aaPredicted RBP5.14□□□□□ -1.59
MSP1YGR028W YBR137WP38276 179 aa5.14□□□□□ -1.59
MSP1YGR028W PCL6P40038 420 aa5.14□□□□□ -1.59
MSP1YGR028W GWT1P47026 490 aa5.14□□□□□ -1.59
MSP1YGR028W FIT1Q04433 528 aa5.14□□□□□ -1.59
MSP1YGR028W GPN3Q06543 272 aa5.14□□□□□ -1.59
MSP1YGR028W BUD23P25627 275 aaPredicted RBP5.13□□□□□ -1.59
MSP1YGR028W ZUO1P32527 433 aaKnown RBP5.13□□□□□ -1.59
MSP1YGR028W NTC20P38302 140 aaPredicted RBP5.13□□□□□ -1.59
MSP1YGR028W IMD2P38697 523 aaKnown RBP5.13□□□□□ -1.59
MSP1YGR028W DDI1P40087 428 aa5.13□□□□□ -1.59
MSP1YGR028W CCS1P40202 249 aaKnown RBP5.13□□□□□ -1.59
MSP1YGR028W YIL060WP40519 144 aa5.13□□□□□ -1.59
MSP1YGR028W BNA1P47096 177 aa5.13□□□□□ -1.59
MSP1YGR028W IMD3P50095 523 aaKnown RBP5.13□□□□□ -1.59
MSP1YGR028W YGR042WP53227 271 aa5.13□□□□□ -1.59
MSP1YGR028W ATG41Q12048 136 aa5.13□□□□□ -1.59
MSP1YGR028W NKP1Q12493 238 aa5.13□□□□□ -1.59
MSP1YGR028W YCR101CP25607 182 aa5.12□□□□□ -1.59
MSP1YGR028W COQ3P27680 312 aa5.12□□□□□ -1.59
MSP1YGR028W LAC1P28496 418 aa5.12□□□□□ -1.59
MSP1YGR028W SUA7P29055 345 aaPredicted RBP5.12□□□□□ -1.59
MSP1YGR028W OCH1P31755 480 aa5.12□□□□□ -1.59
MSP1YGR028W CBT1P36038 271 aaPredicted RBP5.12□□□□□ -1.59
MSP1YGR028W PMU1P36069 295 aa5.12□□□□□ -1.59
MSP1YGR028W PRY2P36110 329 aa5.12□□□□□ -1.59
MSP1YGR028W CUE1P38428 203 aa5.12□□□□□ -1.59
MSP1YGR028W SSO2P39926 295 aa5.12□□□□□ -1.59
MSP1YGR028W VHT1P53241 593 aa5.12□□□□□ -1.59
MSP1YGR028W CWC25P53854 179 aaKnown RBP5.12□□□□□ -1.59
MSP1YGR028W HNT1Q04344 158 aaKnown RBP5.12□□□□□ -1.59
MSP1YGR028W TFC7Q12415 435 aa5.12□□□□□ -1.59
MSP1YGR028W QCR7P00128 127 aa5.11□□□□□ -1.59
MSP1YGR028W PHO85P17157 305 aa5.11□□□□□ -1.59
MSP1YGR028W RFA3P26755 122 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms