RNA–Protein interactions for RNA: YFR022W

ROG3, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeast

Gene ROG3, Length 2,202 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROG3	YFR022W	GPI12	P23797	304 aa		4.91	□□□□□ -1.62
ROG3	YFR022W	ADK2	P26364	225 aa		4.91	□□□□□ -1.62
ROG3	YFR022W	NNK1	P36003	928 aa		4.91	□□□□□ -1.62
ROG3	YFR022W	REG2	P38232	338 aa		4.91	□□□□□ -1.62
ROG3	YFR022W	BAT1	P38891	393 aa	Known RBP	4.91	□□□□□ -1.62
ROG3	YFR022W	COA1	P40452	197 aa		4.91	□□□□□ -1.62
ROG3	YFR022W	PUS2	P53167	370 aa		4.91	□□□□□ -1.62
ROG3	YFR022W	CRZ1	P53968	678 aa		4.91	□□□□□ -1.62
ROG3	YFR022W	AIM34	Q03673	198 aa		4.91	□□□□□ -1.62
ROG3	YFR022W	UTP15	Q04305	513 aa	Known RBP	4.91	□□□□□ -1.62
ROG3	YFR022W	YPR174C	Q06616	221 aa	Predicted RBP	4.91	□□□□□ -1.62
ROG3	YFR022W	CYT1	P07143	309 aa		4.9	□□□□□ -1.63
ROG3	YFR022W	YCR007C	P25354	239 aa		4.9	□□□□□ -1.63
ROG3	YFR022W	TRR1	P29509	319 aa	Known RBP	4.9	□□□□□ -1.63
ROG3	YFR022W	DRE2	P36152	348 aa		4.9	□□□□□ -1.63
ROG3	YFR022W	SNO3	P43544	222 aa		4.9	□□□□□ -1.63
ROG3	YFR022W	SNO2	P53823	222 aa		4.9	□□□□□ -1.63
ROG3	YFR022W	TSA2	Q04120	196 aa		4.9	□□□□□ -1.63
ROG3	YFR022W	COQ11	Q05892	277 aa		4.9	□□□□□ -1.63
ROG3	YFR022W	ATG33	Q06485	197 aa		4.9	□□□□□ -1.63
ROG3	YFR022W	ISU2	Q12056	156 aa		4.9	□□□□□ -1.63
ROG3	YFR022W	POM34	Q12445	299 aa		4.9	□□□□□ -1.63
ROG3	YFR022W	YKL018C-A	Q3E7A7	99 aa		4.9	□□□□□ -1.63
ROG3	YFR022W	COX1	P00401	534 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	RPL7A	P05737	244 aa	Known RBP	4.89	□□□□□ -1.63
ROG3	YFR022W	YKR104W	P0CE69	306 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	STE18	P18852	110 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	SPC29	P33419	253 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	SAF1	P38352	637 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	PEX7	P39108	375 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	PRE5	P40302	234 aa	Known RBP	4.89	□□□□□ -1.63
ROG3	YFR022W	MSL1	P40567	111 aa	Predicted RBP	4.89	□□□□□ -1.63
ROG3	YFR022W	MAF1	P41910	395 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	ATG27	P46989	271 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	BNA2	P47125	453 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	ELP4	Q02884	456 aa	Known RBP	4.89	□□□□□ -1.63
ROG3	YFR022W	RCR2	Q03446	210 aa	Known RBP	4.89	□□□□□ -1.63
ROG3	YFR022W	LIP2	Q06005	328 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	DIC1	Q06143	298 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	KEI1	Q06346	221 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	YOL024W	Q08172	172 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	INP54	Q08227	384 aa	Known RBP	4.89	□□□□□ -1.63
ROG3	YFR022W	ENV9	Q08651	330 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	YPL247C	Q12523	523 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	HKR1	P41809	1802 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	RAD6	P06104	172 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	POX1	P13711	748 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	FCY2	P17064	533 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	HYP2	P23301	157 aa	Known RBP	4.89	□□□□□ -1.63
ROG3	YFR022W	PPZ2	P33329	710 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	SKN1	P33336	771 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	DCW1	P36091	449 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	THI2	P38141	450 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	ECM33	P38248	429 aa	Known RBP	4.89	□□□□□ -1.63
ROG3	YFR022W	YER076C	P40049	302 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	YFL065C	P43539	102 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	RMD9	P53140	646 aa	Known RBP	4.89	□□□□□ -1.63
ROG3	YFR022W	DUG3	P53871	357 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	SNP1	Q00916	300 aa	Predicted RBP	4.89	□□□□□ -1.63
ROG3	YFR022W	EST3	Q03096	181 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	YPR203W	Q08994	102 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	YPR027C	Q12079	277 aa		4.89	□□□□□ -1.63
ROG3	YFR022W	HEM2	P05373	342 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	RAD23	P32628	398 aa	Known RBP	4.88	□□□□□ -1.63
ROG3	YFR022W	SLC1	P33333	303 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	MTR2	P34232	184 aa	Known RBP	4.88	□□□□□ -1.63
ROG3	YFR022W	YKL102C	P34249	101 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	PAU16	P35994	123 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	PSD1	P39006	500 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	SCS3	P53012	380 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	ABF2	Q02486	183 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	SWT1	Q12104	458 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	YCL012C	Q8J0M4	134 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	ILV1	P00927	576 aa	Known RBP	4.88	□□□□□ -1.63
ROG3	YFR022W	YPT1	P01123	206 aa	Known RBP	4.88	□□□□□ -1.63
ROG3	YFR022W	HVG1	P0CE11	249 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	UTR2	P32623	467 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	ZRT1	P32804	376 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	SHE1	P38200	338 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	PIC2	P40035	300 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	YNL198C	P40166	100 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	TIF34	P40217	347 aa	Known RBP	4.88	□□□□□ -1.63
ROG3	YFR022W	AYR1	P40471	297 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	PHS1	P40857	217 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	YJL007C	P47080	104 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	XPT1	P47165	209 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	ADD37	Q03233	198 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	PRM3	Q08931	133 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	PFA4	Q12006	378 aa		4.88	□□□□□ -1.63
ROG3	YFR022W	RAS1	P01119	309 aa		4.87	□□□□□ -1.63
ROG3	YFR022W	MF(ALPHA)2	P32435	120 aa		4.87	□□□□□ -1.63
ROG3	YFR022W	DUT1	P33317	147 aa		4.87	□□□□□ -1.63
ROG3	YFR022W	MCR1	P36060	302 aa	Known RBP	4.87	□□□□□ -1.63
ROG3	YFR022W	HSP10	P38910	106 aa		4.87	□□□□□ -1.63
ROG3	YFR022W	RPN11	P43588	306 aa	Known RBP	4.87	□□□□□ -1.63
ROG3	YFR022W	HSV2	P50079	448 aa	Predicted RBP	4.87	□□□□□ -1.63
ROG3	YFR022W	CDC14	Q00684	551 aa		4.87	□□□□□ -1.63
ROG3	YFR022W	EMI1	Q04406	187 aa		4.87	□□□□□ -1.63
ROG3	YFR022W	IZH2	Q12442	317 aa		4.87	□□□□□ -1.63
ROG3	YFR022W	YLR363W-A	Q3E747	85 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms