RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W SDC1Q03323 175 aa3.48□□□□□ -1.85
UBP6YFR010W YOR342CQ12182 319 aa3.48□□□□□ -1.85
UBP6YFR010W YLR118CQ12354 227 aa3.48□□□□□ -1.85
UBP6YFR010W PDR18P53756 1333 aa3.48□□□□□ -1.85
UBP6YFR010W ATG15P25641 520 aa3.47□□□□□ -1.85
UBP6YFR010W PTC1P35182 281 aa3.47□□□□□ -1.85
UBP6YFR010W SRL3P36167 246 aa3.47□□□□□ -1.85
UBP6YFR010W YBR062CP38239 180 aa3.47□□□□□ -1.85
UBP6YFR010W TRS20P38334 175 aa3.47□□□□□ -1.85
UBP6YFR010W YHL049CP38722 271 aa3.47□□□□□ -1.85
UBP6YFR010W YHL026CP38740 315 aa3.47□□□□□ -1.85
UBP6YFR010W YPL073CP40323 161 aa3.47□□□□□ -1.85
UBP6YFR010W GLR1P41921 483 aaKnown RBP3.47□□□□□ -1.85
UBP6YFR010W AIF1P52923 378 aa3.47□□□□□ -1.85
UBP6YFR010W MDM34P53083 459 aa3.47□□□□□ -1.85
UBP6YFR010W MRH4P53166 561 aa3.47□□□□□ -1.85
UBP6YFR010W YGL034CP53186 121 aa3.47□□□□□ -1.85
UBP6YFR010W YGR039WP53225 103 aa3.47□□□□□ -1.85
UBP6YFR010W YGR219WP53307 113 aa3.47□□□□□ -1.85
UBP6YFR010W IRC15Q02733 499 aa3.47□□□□□ -1.85
UBP6YFR010W YPR114WQ06107 315 aa3.47□□□□□ -1.85
UBP6YFR010W YOR186WQ08560 144 aa3.47□□□□□ -1.85
UBP6YFR010W IES4Q08561 116 aa3.47□□□□□ -1.85
UBP6YFR010W FCF2Q12035 217 aaPredicted RBP3.47□□□□□ -1.85
UBP6YFR010W PRR2Q12310 699 aa3.47□□□□□ -1.85
UBP6YFR010W TY1B-HO13535 1793 aa3.47□□□□□ -1.85
UBP6YFR010W SPP41P38904 1435 aa3.46□□□□□ -1.85
UBP6YFR010W TRM3Q07527 1436 aa3.46□□□□□ -1.85
UBP6YFR010W ADH1P00330 348 aaKnown RBP3.46□□□□□ -1.86
UBP6YFR010W SEC59P20048 519 aa3.46□□□□□ -1.86
UBP6YFR010W SPO13P23624 291 aa3.46□□□□□ -1.86
UBP6YFR010W RPL16AP26784 199 aaKnown RBP3.46□□□□□ -1.86
UBP6YFR010W MED6P38782 295 aa3.46□□□□□ -1.86
UBP6YFR010W RPF1P38805 295 aaKnown RBP3.46□□□□□ -1.86
UBP6YFR010W MOB1P40484 314 aa3.46□□□□□ -1.86
UBP6YFR010W LSM8P47093 109 aaKnown RBP3.46□□□□□ -1.86
UBP6YFR010W CAB4P53332 305 aa3.46□□□□□ -1.86
UBP6YFR010W YDR366CP87287 132 aa3.46□□□□□ -1.86
UBP6YFR010W DIG2Q03373 323 aaKnown RBP3.46□□□□□ -1.86
UBP6YFR010W MSA1Q08471 629 aa3.46□□□□□ -1.86
UBP6YFR010W RDL1Q12305 139 aaKnown RBP3.46□□□□□ -1.86
UBP6YFR010W MPD1Q12404 318 aaKnown RBP3.46□□□□□ -1.86
UBP6YFR010W YCR024C-BQ3E7Z8 88 aa3.46□□□□□ -1.86
UBP6YFR010W FMP49A0A023PZB3 126 aa3.45□□□□□ -1.86
UBP6YFR010W VAR1P02381 398 aa3.45□□□□□ -1.86
UBP6YFR010W STE7P06784 515 aa3.45□□□□□ -1.86
UBP6YFR010W RPL30P14120 105 aaKnown RBP3.45□□□□□ -1.86
UBP6YFR010W PTM1P32857 523 aa3.45□□□□□ -1.86
UBP6YFR010W YOR062CP36025 268 aa3.45□□□□□ -1.86
UBP6YFR010W POP8P38208 133 aa3.45□□□□□ -1.86
UBP6YFR010W YGR018CP53211 109 aa3.45□□□□□ -1.86
UBP6YFR010W NRM1P53718 249 aa3.45□□□□□ -1.86
UBP6YFR010W PGA1P53896 198 aa3.45□□□□□ -1.86
UBP6YFR010W RNH201P53942 307 aa3.45□□□□□ -1.86
UBP6YFR010W CTL1Q03220 320 aaKnown RBP3.45□□□□□ -1.86
UBP6YFR010W VPS71Q03433 280 aa3.45□□□□□ -1.86
UBP6YFR010W INP1Q03694 420 aa3.45□□□□□ -1.86
UBP6YFR010W HRI1Q05905 244 aaKnown RBP3.45□□□□□ -1.86
UBP6YFR010W BSP1Q06604 576 aa3.45□□□□□ -1.86
UBP6YFR010W YHR214C-EQ8TGK0 99 aa3.45□□□□□ -1.86
UBP6YFR010W MHP1P43638 1398 aa3.45□□□□□ -1.86
UBP6YFR010W YHR139C-AO13536 103 aa3.44□□□□□ -1.86
UBP6YFR010W MBF1O14467 151 aaKnown RBP3.44□□□□□ -1.86
UBP6YFR010W YER039C-AP0CD97 72 aa3.44□□□□□ -1.86
UBP6YFR010W RPL23AP0CX41 137 aaKnown RBP3.44□□□□□ -1.86
UBP6YFR010W RPL23BP0CX42 137 aaKnown RBP3.44□□□□□ -1.86
UBP6YFR010W MRPL20P22354 195 aaPredicted RBP3.44□□□□□ -1.86
UBP6YFR010W MBA1P38300 278 aa3.44□□□□□ -1.86
UBP6YFR010W DLS1P40366 167 aa3.44□□□□□ -1.86
UBP6YFR010W OST1P41543 476 aaKnown RBP3.44□□□□□ -1.86
UBP6YFR010W DAD3P69850 94 aa3.44□□□□□ -1.86
UBP6YFR010W AIM11P87275 137 aa3.44□□□□□ -1.86
UBP6YFR010W MRX8Q05473 314 aa3.44□□□□□ -1.86
UBP6YFR010W SYC1Q08553 188 aaPredicted RBP3.44□□□□□ -1.86
UBP6YFR010W FCY1Q12178 158 aa3.44□□□□□ -1.86
UBP6YFR010W PCL9Q12477 304 aa3.44□□□□□ -1.86
UBP6YFR010W PSK1P31374 1356 aa3.44□□□□□ -1.86
UBP6YFR010W YIL177CP40434 1758 aa3.44□□□□□ -1.86
UBP6YFR010W YJL225CP40889 1758 aa3.44□□□□□ -1.86
UBP6YFR010W YMR316C-AI2HB70 103 aa3.44□□□□□ -1.86
UBP6YFR010W HEM4P06174 275 aa3.44□□□□□ -1.86
UBP6YFR010W AQY1P0CD91 305 aa3.44□□□□□ -1.86
UBP6YFR010W MIR1P23641 311 aaKnown RBP3.44□□□□□ -1.86
UBP6YFR010W GPX1P36014 167 aa3.44□□□□□ -1.86
UBP6YFR010W CSH1P38287 376 aa3.44□□□□□ -1.86
UBP6YFR010W MTC6P38849 526 aa3.44□□□□□ -1.86
UBP6YFR010W YFR054CP43622 192 aa3.44□□□□□ -1.86
UBP6YFR010W LCB3P47013 409 aa3.44□□□□□ -1.86
UBP6YFR010W YGR050CP53231 118 aa3.44□□□□□ -1.86
UBP6YFR010W TPC1P53257 314 aa3.44□□□□□ -1.86
UBP6YFR010W ERV29P53337 310 aa3.44□□□□□ -1.86
UBP6YFR010W YNL234WP53857 426 aa3.44□□□□□ -1.86
UBP6YFR010W YNL010WP53981 241 aaKnown RBP3.44□□□□□ -1.86
UBP6YFR010W THI74Q04083 370 aa3.44□□□□□ -1.86
UBP6YFR010W YLR177WQ06251 628 aa3.44□□□□□ -1.86
UBP6YFR010W YDL180WQ12301 547 aa3.44□□□□□ -1.86
UBP6YFR010W TSC3Q3E790 80 aa3.44□□□□□ -1.86
UBP6YFR010W BOL1Q3E793 110 aa3.44□□□□□ -1.86
UBP6YFR010W SPS2P08459 502 aa3.43□□□□□ -1.86
UBP6YFR010W CCA1P21269 546 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 75.7 ms