RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	MRS4	P23500	304 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	CWP1	P28319	239 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	PAU16	P35994	123 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	LSM2	P38203	95 aa	Known RBP	4.83	□□□□□ -1.64
VTC2	YFL004W	QDR3	P38227	689 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	GIP2	P40036	548 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	BXI1	P48558	297 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	DIA1	P54005	336 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	VAM3	Q12241	283 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	CYC7	P00045	113 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	PAU1	P0CE88	120 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	PAU14	P0CE89	120 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	PAU6	P0CE90	120 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	PAU18	P0CE91	120 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	PAU8	P0CE92	120 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	PAU11	P0CE93	120 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	ANB1	P19211	157 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	RNQ1	P25367	405 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	TIM23	P32897	222 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	UMP1	P38293	148 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	PAU13	P38725	120 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	FET4	P40988	552 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	PAU10	Q03050	120 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	YDR248C	Q03786	193 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	PAU20	Q08322	120 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	PAU9	Q3E770	120 aa		4.83	□□□□□ -1.64
VTC2	YFL004W	PAI3	P01094	68 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	QCR2	P07257	368 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	NUP1	P20676	1076 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	DAL82	P21705	255 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	ERG3	P32353	365 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	MTR2	P34232	184 aa	Known RBP	4.82	□□□□□ -1.64
VTC2	YFL004W	ECM15	P35195	104 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	YPT35	P38815	214 aa	Known RBP	4.82	□□□□□ -1.64
VTC2	YFL004W	TIM17	P39515	158 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	TTI2	P47168	421 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	PDR16	P53860	351 aa	Known RBP	4.82	□□□□□ -1.64
VTC2	YFL004W	APS2	Q00381	147 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	PIR3	Q03180	325 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	THI74	Q04083	370 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	YDR391C	Q04170	232 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	FSF1	Q12029	327 aa	Known RBP	4.82	□□□□□ -1.64
VTC2	YFL004W	SME1	Q12330	94 aa	Predicted RBP	4.82	□□□□□ -1.64
VTC2	YFL004W	YFL068W	P0CX99	160 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	YLL066W-A	P0CY00	160 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	YLL067W-A	P0CY01	160 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	AFG1	P32317	509 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	MTC7	P32633	139 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	SLC1	P33333	303 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	SMD3	P43321	101 aa	Known RBP	4.82	□□□□□ -1.64
VTC2	YFL004W	RPA43	P46669	326 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	YDL183C	P48569	320 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	ALG9	P53868	555 aa	Known RBP	4.82	□□□□□ -1.64
VTC2	YFL004W	YNL184C	P53876	108 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	YMR082C	Q04276	118 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	MRX8	Q05473	314 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	LOA1	Q06508	300 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	STP4	Q07351	490 aa		4.82	□□□□□ -1.64
VTC2	YFL004W	MCK1	P21965	375 aa	Known RBP	4.81	□□□□□ -1.64
VTC2	YFL004W	MAK32	P23060	363 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
VTC2	YFL004W	YNL195C	P40168	261 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	HSV2	P50079	448 aa	Predicted RBP	4.81	□□□□□ -1.64
VTC2	YFL004W	UBC9	P50623	157 aa	Predicted RBP	4.81	□□□□□ -1.64
VTC2	YFL004W	YIP4	P53093	235 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	SGF73	P53165	657 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	RPN14	P53196	417 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	YMR166C	Q03829	368 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	YMR310C	Q04867	317 aa	Predicted RBP	4.81	□□□□□ -1.64
VTC2	YFL004W	SNO4	Q04902	237 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	YOL024W	Q08172	172 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	HSP32	Q08992	237 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	CPA1	P07258	411 aa	Known RBP	4.81	□□□□□ -1.64
VTC2	YFL004W	TIR1	P10863	254 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	MRPL16	P38064	232 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	YBR184W	P38299	523 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	AZF1	P41696	914 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	SCS3	P53012	380 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	YPL080C	Q02826	108 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	RCR2	Q03446	210 aa	Known RBP	4.81	□□□□□ -1.64
VTC2	YFL004W	FCY22	Q12119	530 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	PEX11	Q12462	236 aa		4.81	□□□□□ -1.64
VTC2	YFL004W	RPS21A	P0C0V8	87 aa	Known RBP	4.8	□□□□□ -1.64
VTC2	YFL004W	EMP70	P32802	667 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	PCL5	P38794	229 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	YHR127W	P38833	243 aa	Known RBP	4.8	□□□□□ -1.64
VTC2	YFL004W	POP2	P39008	433 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	BTT1	P40314	149 aa	Predicted RBP	4.8	□□□□□ -1.64
VTC2	YFL004W	GPP1	P41277	250 aa	Known RBP	4.8	□□□□□ -1.64
VTC2	YFL004W	LST7	P53237	242 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	HOL1	P53389	586 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	YDL242W	Q07746	117 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	YLR012C	Q07927	99 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	RPS9B	P05755	195 aa	Known RBP	4.8	□□□□□ -1.64
VTC2	YFL004W	URA5	P13298	226 aa	Known RBP	4.8	□□□□□ -1.64
VTC2	YFL004W	NPR1	P22211	790 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	YCR007C	P25354	239 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	ADK2	P26364	225 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	MRP49	P32388	137 aa		4.8	□□□□□ -1.64
VTC2	YFL004W	MDL1	P33310	695 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms