RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W MRPL28P36527 147 aa1.09□□□□□ -2.24
MSN5YDR335W SMP1P38128 452 aa1.09□□□□□ -2.24
MSN5YDR335W PAN6P40459 309 aa1.09□□□□□ -2.24
MSN5YDR335W SNM1P40993 198 aa1.09□□□□□ -2.24
MSN5YDR335W SNO3P43544 222 aa1.09□□□□□ -2.24
MSN5YDR335W HHO1P53551 258 aa1.09□□□□□ -2.24
MSN5YDR335W SWS2P53937 143 aa1.09□□□□□ -2.24
MSN5YDR335W MRX11Q03079 207 aa1.09□□□□□ -2.24
MSN5YDR335W YOL014WQ08110 124 aa1.09□□□□□ -2.24
MSN5YDR335W MSA1Q08471 629 aa1.09□□□□□ -2.24
MSN5YDR335W YLR053CQ12026 108 aa1.09□□□□□ -2.24
MSN5YDR335W ATP16Q12165 160 aa1.09□□□□□ -2.24
MSN5YDR335W YGK3Q12222 375 aaPredicted RBP1.09□□□□□ -2.24
MSN5YDR335W MHT1Q12525 324 aa1.09□□□□□ -2.24
MSN5YDR335W FOL3Q12676 427 aaPredicted RBP1.09□□□□□ -2.24
MSN5YDR335W Q0144Q9ZZW2 109 aa1.09□□□□□ -2.24
MSN5YDR335W UBR1P19812 1950 aa1.08□□□□□ -2.24
MSN5YDR335W RPN13O13563 156 aa1.08□□□□□ -2.24
MSN5YDR335W MRS1P07266 363 aa1.08□□□□□ -2.24
MSN5YDR335W RPL2AP0CX45 254 aaKnown RBP1.08□□□□□ -2.24
MSN5YDR335W RPL2BP0CX46 254 aaKnown RBP1.08□□□□□ -2.24
MSN5YDR335W MRPS28P21771 286 aa1.08□□□□□ -2.24
MSN5YDR335W ERG24P32462 438 aaKnown RBP1.08□□□□□ -2.24
MSN5YDR335W TOA2P32774 122 aa1.08□□□□□ -2.24
MSN5YDR335W NUF2P33895 451 aa1.08□□□□□ -2.24
MSN5YDR335W APS1P35181 156 aa1.08□□□□□ -2.24
MSN5YDR335W TRR2P38816 342 aa1.08□□□□□ -2.24
MSN5YDR335W YIL067CP40514 678 aa1.08□□□□□ -2.24
MSN5YDR335W YJR054WP47114 497 aa1.08□□□□□ -2.24
MSN5YDR335W SBH1P52870 82 aa1.08□□□□□ -2.24
MSN5YDR335W YGL118CP53132 145 aa1.08□□□□□ -2.24
MSN5YDR335W YMR166CQ03829 368 aa1.08□□□□□ -2.24
MSN5YDR335W SHH4Q06236 168 aa1.08□□□□□ -2.24
MSN5YDR335W FCY1Q12178 158 aa1.08□□□□□ -2.24
MSN5YDR335W YLR111WQ12528 110 aa1.08□□□□□ -2.24
MSN5YDR335W PSK1P31374 1356 aa1.08□□□□□ -2.24
MSN5YDR335W PHO2P07269 559 aa1.08□□□□□ -2.24
MSN5YDR335W PBI2P0CT04 75 aaKnown RBP1.08□□□□□ -2.24
MSN5YDR335W RPL4AP10664 362 aaKnown RBP1.08□□□□□ -2.24
MSN5YDR335W ATG15P25641 520 aa1.08□□□□□ -2.24
MSN5YDR335W SUA7P29055 345 aaPredicted RBP1.08□□□□□ -2.24
MSN5YDR335W YKR041WP36134 250 aa1.08□□□□□ -2.24
MSN5YDR335W DOG2P38773 246 aa1.08□□□□□ -2.24
MSN5YDR335W DOG1P38774 246 aa1.08□□□□□ -2.24
MSN5YDR335W OXA1P39952 402 aa1.08□□□□□ -2.24
MSN5YDR335W OST3P48439 350 aa1.08□□□□□ -2.24
MSN5YDR335W RPL4BP49626 362 aaKnown RBP1.08□□□□□ -2.24
MSN5YDR335W TPN1P53099 579 aa1.08□□□□□ -2.24
MSN5YDR335W ALG9P53868 555 aaKnown RBP1.08□□□□□ -2.24
MSN5YDR335W UBC7Q02159 165 aa1.08□□□□□ -2.24
MSN5YDR335W YLR012CQ07927 99 aa1.08□□□□□ -2.24
MSN5YDR335W COQ10Q08058 207 aa1.08□□□□□ -2.24
MSN5YDR335W NSL1Q12143 216 aa1.08□□□□□ -2.24
MSN5YDR335W CRC1Q12289 327 aa1.08□□□□□ -2.24
MSN5YDR335W YPR014CQ6B0W2 109 aa1.08□□□□□ -2.24
MSN5YDR335W PDR18P53756 1333 aa1.08□□□□□ -2.24
MSN5YDR335W SAL1D6W196 494 aa1.08□□□□□ -2.24
MSN5YDR335W YAL064W-BO13512 126 aa1.08□□□□□ -2.24
MSN5YDR335W DSF1P0CX08 502 aa1.08□□□□□ -2.24
MSN5YDR335W YNR073CP0CX09 502 aa1.08□□□□□ -2.24
MSN5YDR335W MCK1P21965 375 aaKnown RBP1.08□□□□□ -2.24
MSN5YDR335W YCR090CP25654 182 aaKnown RBP1.08□□□□□ -2.24
MSN5YDR335W GPX1P36014 167 aa1.08□□□□□ -2.24
MSN5YDR335W EFM1P38732 585 aa1.08□□□□□ -2.24
MSN5YDR335W AIM2P39721 246 aa1.08□□□□□ -2.24
MSN5YDR335W YJR085CP47131 105 aaKnown RBP1.08□□□□□ -2.24
MSN5YDR335W YJR141WP47172 347 aaPredicted RBP1.08□□□□□ -2.24
MSN5YDR335W ERV29P53337 310 aa1.08□□□□□ -2.24
MSN5YDR335W COG5P53951 403 aa1.08□□□□□ -2.24
MSN5YDR335W YLR050CQ12155 161 aaKnown RBP1.08□□□□□ -2.24
MSN5YDR335W JIP3O13555 125 aa1.07□□□□□ -2.24
MSN5YDR335W SRY1P36007 326 aa1.07□□□□□ -2.24
MSN5YDR335W YBL081WP38180 368 aaKnown RBP1.07□□□□□ -2.24
MSN5YDR335W POP8P38208 133 aa1.07□□□□□ -2.24
MSN5YDR335W YBR137WP38276 179 aa1.07□□□□□ -2.24
MSN5YDR335W POP4P38336 279 aa1.07□□□□□ -2.24
MSN5YDR335W ECM14P38836 430 aa1.07□□□□□ -2.24
MSN5YDR335W MDV1P47025 714 aa1.07□□□□□ -2.24
MSN5YDR335W PGU1P47180 361 aa1.07□□□□□ -2.24
MSN5YDR335W PLP1Q04004 230 aa1.07□□□□□ -2.24
MSN5YDR335W YTH1Q06102 208 aaPredicted RBP1.07□□□□□ -2.24
MSN5YDR335W YOR292CQ08743 309 aa1.07□□□□□ -2.24
MSN5YDR335W NDD1Q08887 554 aa1.07□□□□□ -2.24
MSN5YDR335W BOL1Q3E793 110 aa1.07□□□□□ -2.24
MSN5YDR335W MBF1O14467 151 aaKnown RBP1.07□□□□□ -2.24
MSN5YDR335W CKS1P20486 150 aaKnown RBP1.07□□□□□ -2.24
MSN5YDR335W PTC1P35182 281 aa1.07□□□□□ -2.24
MSN5YDR335W MSA2P36157 363 aa1.07□□□□□ -2.24
MSN5YDR335W OPY1P38271 328 aa1.07□□□□□ -2.24
MSN5YDR335W PRS3P38689 320 aaKnown RBP1.07□□□□□ -2.24
MSN5YDR335W ARN2P38724 620 aa1.07□□□□□ -2.24
MSN5YDR335W PTH1P38876 190 aaKnown RBP1.07□□□□□ -2.24
MSN5YDR335W GGC1P38988 300 aa1.07□□□□□ -2.24
MSN5YDR335W YAR068WP39564 161 aa1.07□□□□□ -2.24
MSN5YDR335W FCY21P40039 528 aa1.07□□□□□ -2.24
MSN5YDR335W IRC18P47056 224 aa1.07□□□□□ -2.24
MSN5YDR335W ILM1P47155 203 aa1.07□□□□□ -2.24
MSN5YDR335W CAX4P53223 239 aa1.07□□□□□ -2.24
MSN5YDR335W YDR249CQ03787 373 aa1.07□□□□□ -2.24
MSN5YDR335W YMR027WQ04371 470 aa1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms