RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W DOA4P32571 926 aa1.33□□□□□ -2.2
TRM3YDL112W YBR137WP38276 179 aa1.33□□□□□ -2.2
TRM3YDL112W SBE22P38814 852 aa1.33□□□□□ -2.2
TRM3YDL112W CAB4P53332 305 aa1.33□□□□□ -2.2
TRM3YDL112W MSS11Q03825 758 aa1.33□□□□□ -2.2
TRM3YDL112W SMP3Q04174 516 aa1.33□□□□□ -2.2
TRM3YDL112W PRM3Q08931 133 aa1.33□□□□□ -2.2
TRM3YDL112W ATR1P13090 542 aa1.33□□□□□ -2.2
TRM3YDL112W PMR1P13586 950 aa1.33□□□□□ -2.2
TRM3YDL112W PUT3P25502 979 aaPredicted RBP1.33□□□□□ -2.2
TRM3YDL112W MIG1P27705 504 aa1.33□□□□□ -2.2
TRM3YDL112W NTG1P31378 399 aa1.33□□□□□ -2.2
TRM3YDL112W SEC66P33754 206 aa1.33□□□□□ -2.2
TRM3YDL112W RTC2P38279 296 aa1.33□□□□□ -2.2
TRM3YDL112W AGE2P40529 298 aa1.33□□□□□ -2.2
TRM3YDL112W MRH4P53166 561 aa1.33□□□□□ -2.2
TRM3YDL112W YMR130WQ04223 302 aa1.33□□□□□ -2.2
TRM3YDL112W YMR315WQ04869 349 aaKnown RBP1.33□□□□□ -2.2
TRM3YDL112W PEX30Q06169 523 aa1.33□□□□□ -2.2
TRM3YDL112W MDH1P17505 334 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
TRM3YDL112W SRY1P36007 326 aa1.33□□□□□ -2.2
TRM3YDL112W YKL075CP36083 450 aa1.33□□□□□ -2.2
TRM3YDL112W SMB1P40018 196 aaKnown RBP1.33□□□□□ -2.2
TRM3YDL112W SNL1P40548 159 aa1.33□□□□□ -2.2
TRM3YDL112W ECM27P47144 725 aa1.33□□□□□ -2.2
TRM3YDL112W NOC4Q06512 552 aaPredicted RBP1.33□□□□□ -2.2
TRM3YDL112W YLR108CQ12259 485 aa1.33□□□□□ -2.2
TRM3YDL112W YMR31P19955 123 aa1.32□□□□□ -2.2
TRM3YDL112W IDP1P21954 428 aaKnown RBP1.32□□□□□ -2.2
TRM3YDL112W RFA3P26755 122 aaKnown RBP1.32□□□□□ -2.2
TRM3YDL112W ARO7P32178 256 aa1.32□□□□□ -2.2
TRM3YDL112W RCN1P36054 211 aa1.32□□□□□ -2.2
TRM3YDL112W NAT2P37293 288 aa1.32□□□□□ -2.2
TRM3YDL112W DLS1P40366 167 aa1.32□□□□□ -2.2
TRM3YDL112W RTS2P40962 232 aa1.32□□□□□ -2.2
TRM3YDL112W FIP1P45976 327 aa1.32□□□□□ -2.2
TRM3YDL112W PIR5P46999 287 aa1.32□□□□□ -2.2
TRM3YDL112W TTI2P47168 421 aa1.32□□□□□ -2.2
TRM3YDL112W PKP2P53170 491 aa1.32□□□□□ -2.2
TRM3YDL112W POP6P53218 158 aa1.32□□□□□ -2.2
TRM3YDL112W APJ1P53940 528 aa1.32□□□□□ -2.2
TRM3YDL112W YMD8Q03697 442 aa1.32□□□□□ -2.2
TRM3YDL112W YHP1Q04116 353 aa1.32□□□□□ -2.2
TRM3YDL112W HOR7Q05827 59 aa1.32□□□□□ -2.2
TRM3YDL112W YLR281CQ05863 155 aa1.32□□□□□ -2.2
TRM3YDL112W YLR345WQ06137 509 aa1.32□□□□□ -2.2
TRM3YDL112W PHO92Q06390 306 aa1.32□□□□□ -2.2
TRM3YDL112W YOR029WQ12243 111 aa1.32□□□□□ -2.2
TRM3YDL112W TRM10Q12400 293 aa1.32□□□□□ -2.2
TRM3YDL112W GRX2P17695 143 aaKnown RBP1.32□□□□□ -2.2
TRM3YDL112W STE18P18852 110 aa1.32□□□□□ -2.2
TRM3YDL112W IMP1P28627 190 aa1.32□□□□□ -2.2
TRM3YDL112W NTC20P38302 140 aaPredicted RBP1.32□□□□□ -2.2
TRM3YDL112W BMT5P40493 336 aa1.32□□□□□ -2.2
TRM3YDL112W YFR035CP43608 114 aa1.32□□□□□ -2.2
TRM3YDL112W VPS55P47111 140 aa1.32□□□□□ -2.2
TRM3YDL112W YGR149WP48236 432 aa1.32□□□□□ -2.2
TRM3YDL112W YMR226CQ05016 267 aaKnown RBP1.32□□□□□ -2.2
TRM3YDL112W SNF4P12904 322 aa1.32□□□□□ -2.2
TRM3YDL112W ERG2P32352 222 aa1.32□□□□□ -2.2
TRM3YDL112W AUA1P32450 94 aa1.32□□□□□ -2.2
TRM3YDL112W PDC2P32896 925 aa1.32□□□□□ -2.2
TRM3YDL112W SNC2P33328 115 aa1.32□□□□□ -2.2
TRM3YDL112W UTP30P36144 274 aaKnown RBP1.32□□□□□ -2.2
TRM3YDL112W YER079WP40052 210 aaKnown RBP1.32□□□□□ -2.2
TRM3YDL112W FMP33P46998 180 aa1.32□□□□□ -2.2
TRM3YDL112W CPR1P14832 162 aaKnown RBP1.31□□□□□ -2.2
TRM3YDL112W DPB2P24482 689 aaPredicted RBP1.31□□□□□ -2.2
TRM3YDL112W ROX3P25046 220 aa1.31□□□□□ -2.2
TRM3YDL112W YCP4P25349 247 aaKnown RBP1.31□□□□□ -2.2
TRM3YDL112W ERV1P27882 189 aa1.31□□□□□ -2.2
TRM3YDL112W HYM1P32464 399 aa1.31□□□□□ -2.2
TRM3YDL112W PDB1P32473 366 aaKnown RBP1.31□□□□□ -2.2
TRM3YDL112W PRP21P32524 280 aaPredicted RBP1.31□□□□□ -2.2
TRM3YDL112W PAU2P32612 120 aa1.31□□□□□ -2.2
TRM3YDL112W YUH1P35127 236 aa1.31□□□□□ -2.2
TRM3YDL112W PMU1P36069 295 aa1.31□□□□□ -2.2
TRM3YDL112W YCR041WP37265 110 aa1.31□□□□□ -2.2
TRM3YDL112W FMP23P38231 175 aa1.31□□□□□ -2.2
TRM3YDL112W MIC12P38341 106 aa1.31□□□□□ -2.2
TRM3YDL112W MPC2P38857 129 aa1.31□□□□□ -2.2
TRM3YDL112W YND1P40009 630 aa1.31□□□□□ -2.2
TRM3YDL112W PHM8P40025 321 aa1.31□□□□□ -2.2
TRM3YDL112W AIM20P40451 204 aa1.31□□□□□ -2.2
TRM3YDL112W YIP1P53039 248 aa1.31□□□□□ -2.2
TRM3YDL112W YGR219WP53307 113 aa1.31□□□□□ -2.2
TRM3YDL112W RPL21AQ02753 160 aaKnown RBP1.31□□□□□ -2.2
TRM3YDL112W GRX3Q03835 250 aa1.31□□□□□ -2.2
TRM3YDL112W SCW10Q04951 389 aa1.31□□□□□ -2.2
TRM3YDL112W YLR173WQ06247 608 aa1.31□□□□□ -2.2
TRM3YDL112W YNG1Q08465 219 aa1.31□□□□□ -2.2
TRM3YDL112W RAD28Q12021 506 aa1.31□□□□□ -2.2
TRM3YDL112W RPL21BQ12672 160 aaKnown RBP1.31□□□□□ -2.2
TRM3YDL112W TDH1P00360 332 aaKnown RBP1.31□□□□□ -2.2
TRM3YDL112W ADK1P07170 222 aaKnown RBP1.31□□□□□ -2.2
TRM3YDL112W PET54P10834 293 aa1.31□□□□□ -2.2
TRM3YDL112W AHC2P25649 128 aa1.31□□□□□ -2.2
TRM3YDL112W SHE1P38200 338 aa1.31□□□□□ -2.2
TRM3YDL112W MED8P38304 223 aa1.31□□□□□ -2.2
TRM3YDL112W YBR285WP38354 144 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms